Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:17:52 (2769976): wrapper (7.7.26015): starting
16:17:52 (2769976): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 16:17:52] Arguments: --nthreads 3
[2026-02-01 16:17:52] Threads: 3
[2026-02-01 16:17:52] Checking for CVMFS
[2026-02-01 16:17:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 16:17:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 16:17:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 16:17:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 16:17:53] 2.9.2.0 1810664 5878 85680 155755 0 49 23184414 36864001 0 130560 0 2719050 99.987 183741 15163 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 16:17:53] CVMFS is ok
[2026-02-01 16:17:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 16:17:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 16:17:53] Further information can be found at the LHC@home message board.
[2026-02-01 16:17:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 16:17:53] Checking for apptainer binary...
[2026-02-01 16:17:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 16:17:53] Running /usr/bin/apptainer --version
[2026-02-01 16:17:53] apptainer version 1.4.1-1.1
[2026-02-01 16:17:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 16:17:53] magicA252
[2026-02-01 16:17:53] apptainer works
[2026-02-01 16:17:53] Set ATHENA_PROC_NUMBER=3
[2026-02-01 16:17:53] Set ATHENA_CORE_NUMBER=3
[2026-02-01 16:17:53] Starting ATLAS job with PandaID=6991033996
[2026-02-01 16:17:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 17:45:32]  *** The last 200 lines of the pilot log: ***
[2026-02-01 17:45:32] 2026-02-01 16:45:01,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 17:45:32] 2026-02-01 16:45:01,736 | INFO     | did not find any defunct processes belonging to 2778441
[2026-02-01 17:45:32] 2026-02-01 16:45:01,737 | INFO     | did not find any defunct processes belonging to 2778441
[2026-02-01 17:45:32] 2026-02-01 16:45:01,737 | INFO     | ready for new job
[2026-02-01 17:45:32] 2026-02-01 16:45:01,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | **************************************
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | **************************************
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | 
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | architecture information:
[2026-02-01 17:45:32] 2026-02-01 16:45:01,738 | INFO     | executing command: cat /etc/os-release
[2026-02-01 17:45:32] 2026-02-01 16:45:01,748 | INFO     | cat /etc/os-release:
[2026-02-01 17:45:32] NAME="CentOS Linux"
[2026-02-01 17:45:32] VERSION="7 (Core)"
[2026-02-01 17:45:32] ID="centos"
[2026-02-01 17:45:32] ID_LIKE="rhel fedora"
[2026-02-01 17:45:32] VERSION_ID="7"
[2026-02-01 17:45:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 17:45:32] ANSI_COLOR="0;31"
[2026-02-01 17:45:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 17:45:32] HOME_URL="https://www.centos.org/"
[2026-02-01 17:45:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 17:45:32] 
[2026-02-01 17:45:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 17:45:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 17:45:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 17:45:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 17:45:32] 
[2026-02-01 17:45:32] 2026-02-01 16:45:01,748 | INFO     | **************************************
[2026-02-01 17:45:32] 2026-02-01 16:45:02,250 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 17:45:32] 2026-02-01 16:45:02,262 | INFO     | sufficient remaining disk space (377776766976 B)
[2026-02-01 17:45:32] 2026-02-01 16:45:02,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 17:45:32] 2026-02-01 16:45:02,262 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 17:45:32] 2026-02-01 16:45:02,262 | INFO     | update_server=False
[2026-02-01 17:45:32] 2026-02-01 16:45:02,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 17:45:32] 2026-02-01 16:45:02,263 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 17:45:32] 2026-02-01 16:45:02,263 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:45:32] 2026-02-01 16:45:02,676 | INFO     | all data control threads have been joined
[2026-02-01 17:45:32] 2026-02-01 16:45:02,686 | INFO     | all job control threads have been joined
[2026-02-01 17:45:32] 2026-02-01 16:45:03,268 | INFO     | [job] retrieve thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,269 | INFO     | [job] queue monitor thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,396 | INFO     | [data] copytool_in thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,399 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 17:45:32] 2026-02-01 16:45:03,628 | INFO     | [payload] validate_post thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,655 | INFO     | all payload control threads have been joined
[2026-02-01 17:45:32] 2026-02-01 16:45:03,681 | INFO     | [data] control thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,692 | INFO     | [job] control thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:03,813 | INFO     | [payload] failed_post thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:04,235 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:04,533 | WARNING  | process 2778441 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 17:45:32] 2026-02-01 16:45:04,561 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 17:45:32] 2026-02-01 16:45:04,596 | INFO     | number of running child processes to parent process 2778441: 1
[2026-02-01 17:45:32] 2026-02-01 16:45:04,596 | INFO     | maximum number of monitored processes: 6
[2026-02-01 17:45:32] 2026-02-01 16:45:04,597 | INFO     | aborting job monitoring since job object (job id=6991033996) has expired
[2026-02-01 17:45:32] 2026-02-01 16:45:04,597 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:45:32] 2026-02-01 16:45:04,597 | INFO     | will abort loop
[2026-02-01 17:45:32] 2026-02-01 16:45:04,660 | INFO     | [payload] control thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:04,717 | INFO     | [job] validate thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:04,724 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:04,731 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:05,477 | INFO     | [data] copytool_out thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:05,602 | INFO     | [job] job monitor thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:06,268 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 17:45:32] 2026-02-01 16:45:09,571 | INFO     | [monitor] cgroup control has ended
[2026-02-01 17:45:32] 2026-02-01 16:45:10,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140669596370752)>', '<ExcThread(monitor, started 140668794021632)>']
[2026-02-01 17:45:32] 2026-02-01 16:45:15,236 | INFO     | all workflow threads have been joined
[2026-02-01 17:45:32] 2026-02-01 16:45:15,236 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 17:45:32] 2026-02-01 16:45:15,236 | INFO     | traces error code: 0
[2026-02-01 17:45:32] 2026-02-01 16:45:15,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 17:45:32] 2026-02-01 16:45:32,816 | INFO     | PID=2774015 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 17:45:32] 2026-02-01 16:45:32,817 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 17:45:32] 2026-02-01 16:45:32,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 17:45:32] 2026-02-01 16:45:32,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 17:45:32] 2026-02-01 16:45:32,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 17:45:32] 2026-02-01 16:45:32,817 | INFO     | [monitor] control thread has ended
[2026-02-01 17:45:32] 2026-02-01 16:45:32,863 [wrapper] ==== pilot stdout END ====
[2026-02-01 17:45:32] 2026-02-01 16:45:32,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 17:45:32] 2026-02-01 16:45:32,868 [wrapper] pilotpid: 2774015
[2026-02-01 17:45:32] 2026-02-01 16:45:32,870 [wrapper] Pilot exit status: 0
[2026-02-01 17:45:32] 2026-02-01 16:45:32,878 [wrapper] pandaids: 6991033996
[2026-02-01 17:45:32] 2026-02-01 16:45:32,894 [wrapper] cleanup supervisor_pilot 2783772 2774016
[2026-02-01 17:45:32] 2026-02-01 16:45:32,897 [wrapper] Test setup, not cleaning
[2026-02-01 17:45:32] 2026-02-01 16:45:32,899 [wrapper] apfmon messages muted
[2026-02-01 17:45:32] 2026-02-01 16:45:32,902 [wrapper] ==== wrapper stdout END ====
[2026-02-01 17:45:32] 2026-02-01 16:45:32,904 [wrapper] ==== wrapper stderr END ====
[2026-02-01 17:45:32]  *** Error codes and diagnostics ***
[2026-02-01 17:45:32]     "exeErrorCode": 0,
[2026-02-01 17:45:32]     "exeErrorDiag": "",
[2026-02-01 17:45:32]     "pilotErrorCode": 0,
[2026-02-01 17:45:32]     "pilotErrorDiag": "",
[2026-02-01 17:45:32]  *** Listing of results directory ***
[2026-02-01 17:45:32] total 669588
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc    584422 Jan 31 03:41 pilot3.tar.gz
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc      5111 Jan 31 03:41 queuedata.json
[2026-02-01 17:45:32] -rwx------ 1 boinc boinc     36322 Jan 31 03:41 runpilot2-wrapper.sh
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc       100 Feb  1 16:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 17:45:32] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 16:17 run_atlas
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc       105 Feb  1 16:17 job.xml
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc 496325560 Feb  1 16:17 EVNT.48318040._000040.pool.root.1
[2026-02-01 17:45:32] drwxrwx--x 2 boinc boinc      4096 Feb  1 16:17 shared
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc    597770 Feb  1 16:17 input.tar.gz
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc     15845 Feb  1 16:17 start_atlas.sh
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc         0 Feb  1 16:17 boinc_setup_complete
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc      6448 Feb  1 16:17 init_data.xml
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc         0 Feb  1 16:17 boinc_lockfile
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc      2535 Feb  1 16:17 pandaJob.out
[2026-02-01 17:45:32] -rw------- 1 boinc boinc   1010520 Feb  1 16:17 agis_schedconf.cvmfs.json
[2026-02-01 17:45:32] -rw------- 1 boinc boinc   1511668 Feb  1 16:18 agis_ddmendpoints.agis.ALL.json
[2026-02-01 17:45:32] -rw------- 1 boinc boinc       418 Feb  1 16:18 workernode_map.json
[2026-02-01 17:45:32] drwx------ 5 boinc boinc      4096 Feb  1 16:18 pilot3
[2026-02-01 17:45:32] -rw------- 1 boinc boinc 183309679 Feb  1 17:44 HITS.48318042._003942.pool.root.1
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc       530 Feb  1 17:44 boinc_task_state.xml
[2026-02-01 17:45:32] -rw------- 1 boinc boinc      1021 Feb  1 17:44 memory_monitor_summary.json
[2026-02-01 17:45:32] -rw------- 1 boinc boinc    285427 Feb  1 17:45 log.48318042._003942.job.log.tgz.1
[2026-02-01 17:45:32] -rw------- 1 boinc boinc      6304 Feb  1 17:45 heartbeat.json
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc        27 Feb  1 17:45 wrapper_checkpoint.txt
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc      8192 Feb  1 17:45 boinc_mmap_file
[2026-02-01 17:45:32] -rw------- 1 boinc boinc       747 Feb  1 17:45 pilotlog.txt
[2026-02-01 17:45:32] -rw------- 1 boinc boinc        95 Feb  1 17:45 pilot_heartbeat.json
[2026-02-01 17:45:32] -rw------- 1 boinc boinc    762275 Feb  1 17:45 log.48318042._003942.job.log.1
[2026-02-01 17:45:32] -rw------- 1 boinc boinc       357 Feb  1 17:45 output.list
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc       620 Feb  1 17:45 runtime_log
[2026-02-01 17:45:32] -rw------- 1 boinc boinc   1064960 Feb  1 17:45 result.tar.gz
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc      8911 Feb  1 17:45 runtime_log.err
[2026-02-01 17:45:32] -rw------- 1 boinc boinc       660 Feb  1 17:45 K9BMDm16F68n9Rq4apOajLDm4fhM0noT9bVooX4SDmYRMKDmOMLtdm.diag
[2026-02-01 17:45:32] -rw-r--r-- 1 boinc boinc     10496 Feb  1 17:45 stderr.txt
[2026-02-01 17:45:32] HITS file was successfully produced:
[2026-02-01 17:45:32] -rw------- 1 boinc boinc 183309679 Feb  1 17:44 shared/HITS.pool.root.1
[2026-02-01 17:45:32]  *** Contents of shared directory: ***
[2026-02-01 17:45:32] total 665360
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc 496325560 Feb  1 16:17 ATLAS.root_0
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc    597770 Feb  1 16:17 input.tar.gz
[2026-02-01 17:45:32] -rw-r--r-- 2 boinc boinc     15845 Feb  1 16:17 start_atlas.sh
[2026-02-01 17:45:32] -rw------- 1 boinc boinc 183309679 Feb  1 17:44 HITS.pool.root.1
[2026-02-01 17:45:32] -rw------- 1 boinc boinc   1064960 Feb  1 17:45 result.tar.gz
17:45:34 (2769976): run_atlas exited; CPU time 14948.091570
17:45:34 (2769976): called boinc_finish(0)

</stderr_txt>
]]>

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