Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:30:39 (4061737): wrapper (7.7.26015): starting
15:30:39 (4061737): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 15:30:39] Arguments: --nthreads 4
[2026-02-02 15:30:39] Threads: 4
[2026-02-02 15:30:39] Checking for CVMFS
[2026-02-02 15:30:39] No cvmfs_config command found, will try listing directly
[2026-02-02 15:30:39] CVMFS is ok
[2026-02-02 15:30:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 15:30:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 15:30:39] Further information can be found at the LHC@home message board.
[2026-02-02 15:30:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 15:30:39] Checking for apptainer binary...
[2026-02-02 15:30:39] which: no apptainer in ((null))
[2026-02-02 15:30:39] apptainer is not installed, using version from CVMFS
[2026-02-02 15:30:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 15:30:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-02 15:30:40] apptainer works
[2026-02-02 15:30:40] Set ATHENA_PROC_NUMBER=4
[2026-02-02 15:30:40] Set ATHENA_CORE_NUMBER=4
[2026-02-02 15:30:40] Starting ATLAS job with PandaID=6995221493
[2026-02-02 15:30:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:05:52 (81051): wrapper (7.7.26015): starting
18:05:52 (81051): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 18:05:52] Arguments: --nthreads 4
[2026-02-02 18:05:52] Threads: 4
[2026-02-02 18:05:52] This job has been restarted, cleaning up previous attempt
[2026-02-02 18:05:52] Checking for CVMFS
[2026-02-02 18:05:52] No cvmfs_config command found, will try listing directly
[2026-02-02 18:05:52] CVMFS is ok
[2026-02-02 18:05:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 18:05:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 18:05:52] Further information can be found at the LHC@home message board.
[2026-02-02 18:05:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 18:05:52] Checking for apptainer binary...
[2026-02-02 18:05:52] which: no apptainer in ((null))
[2026-02-02 18:05:52] apptainer is not installed, using version from CVMFS
[2026-02-02 18:05:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 18:05:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-02 18:05:52] apptainer works
[2026-02-02 18:05:52] Set ATHENA_PROC_NUMBER=4
[2026-02-02 18:05:52] Set ATHENA_CORE_NUMBER=4
[2026-02-02 18:05:52] Starting ATLAS job with PandaID=6995221493
[2026-02-02 18:05:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 20:58:06]  *** The last 200 lines of the pilot log: ***
[2026-02-02 20:58:06] 2026-02-02 19:54:39,095 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_74906/.job.ad'
[2026-02-02 20:58:06] 2026-02-02 19:54:39,095 | INFO     | total number of processed events: 400 (read)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,119 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6995221493/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,120 | INFO     | extracted standard info from prmon json
[2026-02-02 20:58:06] 2026-02-02 19:54:39,120 | INFO     | extracted standard memory fields from prmon json
[2026-02-02 20:58:06] 2026-02-02 19:54:39,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-02 20:58:06] 2026-02-02 19:54:39,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-02 20:58:06] 2026-02-02 19:54:39,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-02 20:58:06] 2026-02-02 19:54:39,124 | INFO     | fitting pss+swap vs Time
[2026-02-02 20:58:06] 2026-02-02 19:54:39,124 | INFO     | sum of square deviations: 1418361477.5
[2026-02-02 20:58:06] 2026-02-02 19:54:39,125 | INFO     | sum of deviations: 8973442362.500002
[2026-02-02 20:58:06] 2026-02-02 19:54:39,125 | INFO     | mean x: 1770057027.5
[2026-02-02 20:58:06] 2026-02-02 19:54:39,126 | INFO     | mean y: 2319442.0301204817
[2026-02-02 20:58:06] 2026-02-02 19:54:39,126 | INFO     | intersect: -11196169072.058369
[2026-02-02 20:58:06] 2026-02-02 19:54:39,126 | INFO     | chi2: 2.1013936268898172
[2026-02-02 20:58:06] 2026-02-02 19:54:39,126 | INFO     | sum of square deviations: 1294014960.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,127 | INFO     | sum of deviations: 18647981515.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,127 | INFO     | mean x: 1770056875.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,128 | INFO     | mean y: 2330993.5217391304
[2026-02-02 20:58:06] 2026-02-02 19:54:39,128 | INFO     | intersect: -25505865515.658234
[2026-02-02 20:58:06] 2026-02-02 19:54:39,128 | INFO     | chi2: 1.3135297269008384
[2026-02-02 20:58:06] 2026-02-02 19:54:39,128 | INFO     | current chi2=1.3135297269008384 (change=37.492447388596226 %)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,128 | INFO     | sum of square deviations: 1177156955.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,129 | INFO     | sum of deviations: 17661619292.499996
[2026-02-02 20:58:06] 2026-02-02 19:54:39,129 | INFO     | mean x: 1770056722.5
[2026-02-02 20:58:06] 2026-02-02 19:54:39,129 | INFO     | mean y: 2329705.967948718
[2026-02-02 20:58:06] 2026-02-02 19:54:39,129 | INFO     | intersect: -26554934239.285053
[2026-02-02 20:58:06] 2026-02-02 19:54:39,130 | INFO     | chi2: 1.314745955115163
[2026-02-02 20:58:06] 2026-02-02 19:54:39,130 | INFO     | current chi2=1.314745955115163 (change=-0.09259236311265234 %)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,130 | INFO     | right removable region: 155
[2026-02-02 20:58:06] 2026-02-02 19:54:39,130 | INFO     | sum of square deviations: 1294014960.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,131 | INFO     | sum of deviations: -10898011852.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,131 | INFO     | mean x: 1770057180.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,131 | INFO     | mean y: 2343401.0062111802
[2026-02-02 20:58:06] 2026-02-02 19:54:39,131 | INFO     | intersect: 14909515823.771477
[2026-02-02 20:58:06] 2026-02-02 19:54:39,132 | INFO     | chi2: 0.8286494251543562
[2026-02-02 20:58:06] 2026-02-02 19:54:39,132 | INFO     | current chi2=0.8286494251543562 (change=60.566672776066014 %)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,132 | INFO     | sum of square deviations: 1177156955.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,133 | INFO     | sum of deviations: -9651160109.5
[2026-02-02 20:58:06] 2026-02-02 19:54:39,133 | INFO     | mean x: 1770057332.5
[2026-02-02 20:58:06] 2026-02-02 19:54:39,133 | INFO     | mean y: 2341774.3525641025
[2026-02-02 20:58:06] 2026-02-02 19:54:39,133 | INFO     | intersect: 14514515912.551476
[2026-02-02 20:58:06] 2026-02-02 19:54:39,134 | INFO     | chi2: 0.8280155801051354
[2026-02-02 20:58:06] 2026-02-02 19:54:39,134 | INFO     | current chi2=0.8280155801051354 (change=0.07649134000216638 %)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,134 | INFO     | left removable region: 20
[2026-02-02 20:58:06] 2026-02-02 19:54:39,134 | INFO     | sum of square deviations: 762879420.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,138 | INFO     | sum of deviations: 1585718607.0000002
[2026-02-02 20:58:06] 2026-02-02 19:54:39,138 | INFO     | mean x: 1770057302.0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,138 | INFO     | mean y: 2350732.762962963
[2026-02-02 20:58:06] 2026-02-02 19:54:39,138 | INFO     | intersect: -3676884446.0253425
[2026-02-02 20:58:06] 2026-02-02 19:54:39,138 | INFO     | chi2: 0.009748694883009732
[2026-02-02 20:58:06] 2026-02-02 19:54:39,139 | INFO     | current memory leak: 2.08 B/s (using 135 data points, chi2=0.01)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,139 | INFO     | could have reported an average CPU frequency of 2682 MHz (9 samples)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,139 | INFO     | ..............................
[2026-02-02 20:58:06] 2026-02-02 19:54:39,139 | INFO     | . Timing measurements:
[2026-02-02 20:58:06] 2026-02-02 19:54:39,139 | INFO     | . get job = 0 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . initial setup = 1 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . payload setup = 8 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . stage-in = 0 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . payload execution = 10083 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . stage-out = 1 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | . log creation = 0 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,140 | INFO     | ..............................
[2026-02-02 20:58:06] 2026-02-02 19:54:39,319 | INFO     | 
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | job summary report
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | --------------------------------------------------
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | PanDA job id: 6995221493
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | task id: 48317872
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | errors: (none)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,320 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | pilot state: finished 
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | transexitcode: 0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | exeerrorcode: 0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | exeerrordiag: 
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | exitcode: 0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | exitmsg: OK
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | cpuconsumptiontime: 38706 s
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | nevents: 400
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | neventsw: 0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | pid: 88137
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | pgrp: 88137
[2026-02-02 20:58:06] 2026-02-02 19:54:39,321 | INFO     | corecount: 4
[2026-02-02 20:58:06] 2026-02-02 19:54:39,322 | INFO     | event service: False
[2026-02-02 20:58:06] 2026-02-02 19:54:39,322 | INFO     | sizes: {0: 2277850, 1: 2278311, 11: 2278311, 10096: 2307440, 10098: 2316462, 10100: 2316904}
[2026-02-02 20:58:06] 2026-02-02 19:54:39,322 | INFO     | --------------------------------------------------
[2026-02-02 20:58:06] 2026-02-02 19:54:39,322 | INFO     | 
[2026-02-02 20:58:06] 2026-02-02 19:54:39,322 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2026-02-02 20:58:06] 2026-02-02 19:54:39,351 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,353 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 20:58:06] 2026-02-02 19:54:39,354 | INFO     | job 6995221493 has completed (purged errors)
[2026-02-02 20:58:06] 2026-02-02 19:54:39,354 | INFO     | overall cleanup function is called
[2026-02-02 20:58:06] 2026-02-02 19:54:40,363 | INFO     | --- collectZombieJob: --- 10, [88137]
[2026-02-02 20:58:06] 2026-02-02 19:54:40,363 | INFO     | zombie collector waiting for pid 88137
[2026-02-02 20:58:06] 2026-02-02 19:54:40,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 20:58:06] 2026-02-02 19:54:40,363 | INFO     | collected zombie processes
[2026-02-02 20:58:06] 2026-02-02 19:54:40,363 | INFO     | will attempt to kill all subprocesses of pid=88137
[2026-02-02 20:58:06] 2026-02-02 19:54:41,127 | INFO     | process IDs to be killed: [88137] (in reverse order)
[2026-02-02 20:58:06] 2026-02-02 19:54:41,369 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 20:58:06] 2026-02-02 19:54:41,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 20:58:06] 2026-02-02 19:54:41,399 | INFO     | did not find any defunct processes belonging to 88137
[2026-02-02 20:58:06] 2026-02-02 19:54:41,427 | INFO     | did not find any defunct processes belonging to 88137
[2026-02-02 20:58:06] 2026-02-02 19:54:41,427 | INFO     | ready for new job
[2026-02-02 20:58:06] 2026-02-02 19:54:41,427 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 20:58:06] 2026-02-02 19:54:41,429 | INFO     | **************************************
[2026-02-02 20:58:06] 2026-02-02 19:54:41,429 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 20:58:06] 2026-02-02 19:54:41,430 | INFO     | **************************************
[2026-02-02 20:58:06] 2026-02-02 19:54:41,430 | INFO     | 
[2026-02-02 20:58:06] 2026-02-02 19:54:41,438 | INFO     | architecture information:
[2026-02-02 20:58:06] 2026-02-02 19:54:41,438 | INFO     | executing command: cat /etc/os-release
[2026-02-02 20:58:06] 2026-02-02 19:54:41,463 | INFO     | cat /etc/os-release:
[2026-02-02 20:58:06] NAME="CentOS Linux"
[2026-02-02 20:58:06] VERSION="7 (Core)"
[2026-02-02 20:58:06] ID="centos"
[2026-02-02 20:58:06] ID_LIKE="rhel fedora"
[2026-02-02 20:58:06] VERSION_ID="7"
[2026-02-02 20:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 20:58:06] ANSI_COLOR="0;31"
[2026-02-02 20:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 20:58:06] HOME_URL="https://www.centos.org/"
[2026-02-02 20:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 20:58:06] 
[2026-02-02 20:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 20:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 20:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 20:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 20:58:06] 
[2026-02-02 20:58:06] 2026-02-02 19:54:41,464 | INFO     | **************************************
[2026-02-02 20:58:06] 2026-02-02 19:54:41,967 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2026-02-02 20:58:06] 2026-02-02 19:54:41,991 | INFO     | sufficient remaining disk space (3292206727168 B)
[2026-02-02 20:58:06] 2026-02-02 19:54:41,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 20:58:06] 2026-02-02 19:54:41,995 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 20:58:06] 2026-02-02 19:54:41,995 | INFO     | update_server=False
[2026-02-02 20:58:06] 2026-02-02 19:54:41,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 20:58:06] 2026-02-02 19:54:42,195 | INFO     | all data control threads have been joined
[2026-02-02 20:58:06] 2026-02-02 19:54:42,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-02 20:58:06] 2026-02-02 19:54:42,281 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-02 20:58:06] 2026-02-02 19:54:42,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:58:06] 2026-02-02 19:54:42,282 | INFO     | will abort loop
[2026-02-02 20:58:06] 2026-02-02 19:54:42,383 | INFO     | all job control threads have been joined
[2026-02-02 20:58:06] 2026-02-02 19:54:42,491 | INFO     | all payload control threads have been joined
[2026-02-02 20:58:06] 2026-02-02 19:54:42,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 20:58:06] 2026-02-02 19:54:43,000 | INFO     | [job] retrieve thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,002 | INFO     | [data] copytool_in thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,200 | INFO     | [data] control thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,274 | INFO     | [job] validate thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,287 | INFO     | [job] job monitor thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,388 | INFO     | [job] control thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,496 | INFO     | [payload] control thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,711 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,754 | INFO     | [payload] failed_post thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,829 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:43,967 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:44,222 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:44,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 20:58:06] 2026-02-02 19:54:44,362 | INFO     | [payload] validate_post thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:44,678 | INFO     | [data] copytool_out thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:45,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 20:58:06] 2026-02-02 19:54:45,251 | INFO     | [job] queue monitor thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:54:49,045 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 20:58:06] 2026-02-02 19:55:12,054 | INFO     | PID=85409 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-02 20:58:06] 2026-02-02 19:55:12,058 | INFO     | .. there are 9 such processes running
[2026-02-02 20:58:06] 2026-02-02 19:55:12,059 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 20:58:06] 2026-02-02 19:55:12,059 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 20:58:06] 2026-02-02 19:55:12,059 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 20:58:06] 2026-02-02 19:55:23,410 | INFO     | [monitor] cgroup control has ended
[2026-02-02 20:58:06] 2026-02-02 19:55:23,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22984267908928)>', '<ExcThread(monitor, started 22984021759744)>']
[2026-02-02 20:58:06] 2026-02-02 19:55:24,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 20:58:06] 2026-02-02 19:55:24,120 | INFO     | [monitor] control thread has ended
[2026-02-02 20:58:06] 2026-02-02 19:55:28,455 | INFO     | all workflow threads have been joined
[2026-02-02 20:58:06] 2026-02-02 19:55:28,456 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 20:58:06] 2026-02-02 19:55:28,456 | INFO     | traces error code: 0
[2026-02-02 20:58:06] 2026-02-02 19:55:28,457 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 20:58:06] 2026-02-02 19:55:28,637 [wrapper] ==== pilot stdout END ====
[2026-02-02 20:58:06] 2026-02-02 19:55:28,641 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 20:58:06] 2026-02-02 19:55:28,644 [wrapper] pilotpid: 85409
[2026-02-02 20:58:06] 2026-02-02 19:55:28,648 [wrapper] Pilot exit status: 0
[2026-02-02 20:58:06] 2026-02-02 19:55:28,663 [wrapper] pandaids: 6995221493 6995221493
[2026-02-02 20:58:06] 2026-02-02 19:55:28,832 [wrapper] cleanup supervisor_pilot  336049 85410
[2026-02-02 20:58:06] 2026-02-02 19:55:28,836 [wrapper] Test setup, not cleaning
[2026-02-02 20:58:06] 2026-02-02 19:55:28,841 [wrapper] apfmon messages muted
[2026-02-02 20:58:06] 2026-02-02 19:55:28,845 [wrapper] ==== wrapper stdout END ====
[2026-02-02 20:58:06] 2026-02-02 19:55:28,848 [wrapper] ==== wrapper stderr END ====
[2026-02-02 20:58:06]  *** Error codes and diagnostics ***
[2026-02-02 20:58:06]     "exeErrorCode": 0,
[2026-02-02 20:58:06]     "exeErrorDiag": "",
[2026-02-02 20:58:06]     "pilotErrorCode": 0,
[2026-02-02 20:58:06]     "pilotErrorDiag": "",
[2026-02-02 20:58:06]  *** Listing of results directory ***
[2026-02-02 20:58:06] total 1166524
[2026-02-02 20:58:06] drwx------ 5 boinc boinc      4096 Jan 14 11:00 pilot3
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc    584422 Feb  1 01:37 pilot3.tar.gz
[2026-02-02 20:58:06] -rwx------ 1 boinc boinc     36322 Feb  1 01:38 runpilot2-wrapper.sh
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc      5111 Feb  1 01:40 queuedata.json
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc       100 Feb  2 15:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 20:58:06] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 15:30 run_atlas
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc       105 Feb  2 15:30 job.xml
[2026-02-02 20:58:06] -rw-r--r-- 3 boinc boinc 500933066 Feb  2 15:30 EVNT.48317869._000297.pool.root.1
[2026-02-02 20:58:06] -rw-r--r-- 3 boinc boinc 500933066 Feb  2 15:30 ATLAS.root_0
[2026-02-02 20:58:06] -rw-r--r-- 2 boinc boinc     15845 Feb  2 15:30 start_atlas.sh
[2026-02-02 20:58:06] drwxrwx--x 2 boinc boinc      4096 Feb  2 15:30 shared
[2026-02-02 20:58:06] -rw-r--r-- 2 boinc boinc    597757 Feb  2 15:30 input.tar.gz
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc         0 Feb  2 15:30 boinc_lockfile
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc      6696 Feb  2 18:05 init_data.xml
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc      2519 Feb  2 18:05 pandaJob.out
[2026-02-02 20:58:06] -rw------- 1 boinc boinc   1009772 Feb  2 18:06 agis_schedconf.cvmfs.json
[2026-02-02 20:58:06] -rw------- 1 boinc boinc       444 Feb  2 18:06 workernode_map.json
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc       531 Feb  2 20:54 boinc_task_state.xml
[2026-02-02 20:58:06] -rw------- 1 boinc boinc 185094714 Feb  2 20:54 HITS.48317872._016296.pool.root.1
[2026-02-02 20:58:06] -rw------- 1 boinc boinc      1034 Feb  2 20:54 memory_monitor_summary.json
[2026-02-02 20:58:06] -rw------- 1 boinc boinc   1511668 Feb  2 20:54 agis_ddmendpoints.agis.ALL.json
[2026-02-02 20:58:06] -rw------- 1 boinc boinc    393475 Feb  2 20:54 log.48317872._016296.job.log.tgz.1
[2026-02-02 20:58:06] -rw------- 1 boinc boinc      6363 Feb  2 20:54 heartbeat.json
[2026-02-02 20:58:06] -rw------- 1 boinc boinc        97 Feb  2 20:55 pilot_heartbeat.json
[2026-02-02 20:58:06] -rw------- 1 boinc boinc      5016 Feb  2 20:55 pilotlog.txt
[2026-02-02 20:58:06] -rw------- 1 boinc boinc   1408030 Feb  2 20:55 log.48317872._016296.job.log.1
[2026-02-02 20:58:06] -rw------- 1 boinc boinc       357 Feb  2 20:55 output.list
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc       620 Feb  2 20:55 runtime_log
[2026-02-02 20:58:06] -rw------- 1 boinc boinc   1822720 Feb  2 20:55 result.tar.gz
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc      9299 Feb  2 20:55 runtime_log.err
[2026-02-02 20:58:06] -rw------- 1 boinc boinc       790 Feb  2 20:55 YVGLDmDfa68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmr4OKDmbRgSfm.diag
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc        27 Feb  2 20:58 wrapper_checkpoint.txt
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc      8192 Feb  2 20:58 boinc_mmap_file
[2026-02-02 20:58:06] -rw-r--r-- 1 boinc boinc     22798 Feb  2 20:58 stderr.txt
[2026-02-02 20:58:06] HITS file was successfully produced:
[2026-02-02 20:58:06] -rw------- 1 boinc boinc 185094714 Feb  2 20:54 shared/HITS.pool.root.1
[2026-02-02 20:58:06]  *** Contents of shared directory: ***
[2026-02-02 20:58:06] total 672344
[2026-02-02 20:58:06] -rw-r--r-- 3 boinc boinc 500933066 Feb  2 15:30 ATLAS.root_0
[2026-02-02 20:58:06] -rw-r--r-- 2 boinc boinc     15845 Feb  2 15:30 start_atlas.sh
[2026-02-02 20:58:06] -rw-r--r-- 2 boinc boinc    597757 Feb  2 15:30 input.tar.gz
[2026-02-02 20:58:06] -rw------- 1 boinc boinc 185094714 Feb  2 20:54 HITS.pool.root.1
[2026-02-02 20:58:06] -rw------- 1 boinc boinc   1822720 Feb  2 20:55 result.tar.gz
20:58:07 (81051): run_atlas exited; CPU time 39369.782471
20:58:07 (81051): called boinc_finish(0)

</stderr_txt>
]]>

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