Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:41:33 (658787): wrapper (7.7.26015): starting
19:41:33 (658787): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 19:41:33] Arguments: --nthreads 8
[2026-01-31 19:41:33] Threads: 8
[2026-01-31 19:41:33] Checking for CVMFS
[2026-01-31 19:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 19:41:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 19:41:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 19:41:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 19:41:36] 2.11.3.0 1215219 124337 175016 155736 2 261 37668271 45568001 11511 130560 0 696248267 99.805 421273004 21870 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-31 19:41:36] CVMFS is ok
[2026-01-31 19:41:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 19:41:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 19:41:36] Further information can be found at the LHC@home message board.
[2026-01-31 19:41:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 19:41:36] Checking for apptainer binary...
[2026-01-31 19:41:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 19:41:36] Running /usr/bin/apptainer --version
[2026-01-31 19:41:36] apptainer version 1.4.1-1.el9
[2026-01-31 19:41:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 19:41:38] wns0018.triumf.lcg
[2026-01-31 19:41:38] apptainer works
[2026-01-31 19:41:38] Set ATHENA_PROC_NUMBER=8
[2026-01-31 19:41:38] Set ATHENA_CORE_NUMBER=8
[2026-01-31 19:41:38] Starting ATLAS job with PandaID=6995221402
[2026-01-31 19:41:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 19:50:50]  *** The last 200 lines of the pilot log: ***
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | wrong length of table data, x=[1769917539.0, 1769917600.0, 1769917661.0], y=[2671.0, 215000.0, 615254.0] (must be same and length>=4)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | . Timing measurements:
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . get job = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . initial setup = 46 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload setup = 66 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-in = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload execution = 189 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-out = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . log creation = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995221402/pilotlog.txt
[2026-01-31 19:50:50] 2026-02-01 03:50:09,676 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-31 19:50:50] - Log from pilotlog.txt -
[2026-01-31 19:50:50] 2026-02-01 03:50:09,478 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6995221402/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | INFO     | extracted standard info from prmon json
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | wrong length of table data, x=[1769917539.0, 1769917600.0, 1769917661.0], y=[2671.0, 215000.0, 615254.0] (must be same and length>=4)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | . Timing measurements:
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . get job = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . initial setup = 46 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload setup = 66 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-in = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload execution = 189 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-out = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . log creation = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995221402/pilotlog.txt
[2026-01-31 19:50:50] 2026-02-01 03:50:09,676 | WARNING  | 
[2026-01-31 19:50:50] [begin log extracts]
[2026-01-31 19:50:50] - Log from pilotlog.txt -
[2026-01-31 19:50:50] 2026-02-01 03:50:09,478 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6995221402/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | INFO     | extracted standard info from prmon json
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 19:50:50] 2026-02-01 03:50:09,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | WARNING  | wrong length of table data, x=[1769917539.0, 1769917600.0, 1769917661.0], y=[2671.0, 215000.0, 615254.0] (must be same and length>=4)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,500 | INFO     | . Timing measurements:
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . get job = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . initial setup = 46 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload setup = 66 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-in = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . payload execution = 189 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . stage-out = 1 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | . log creation = 0 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | ..............................
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 19:50:50] 2026-02-01 03:50:09,501 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995221402/pilotlog.txt
[2026-01-31 19:50:50] [end log extracts]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,677 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,678 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-31 19:50:50] 2026-02-01 03:50:09,819 | INFO     | 
[2026-01-31 19:50:50] 2026-02-01 03:50:09,819 | INFO     | job summary report
[2026-01-31 19:50:50] 2026-02-01 03:50:09,819 | INFO     | --------------------------------------------------
[2026-01-31 19:50:50] 2026-02-01 03:50:09,819 | INFO     | PanDA job id: 6995221402
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | task id: 48317872
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-31 19:47:47,583 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | pilot state: failed 
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | transexitcode: 65
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | exeerrorcode: 65
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | exitcode: 65
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | cpuconsumptiontime: 16 s
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | nevents: 0
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | neventsw: 0
[2026-01-31 19:50:50] 2026-02-01 03:50:09,820 | INFO     | pid: 667942
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | pgrp: 667942
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | corecount: 8
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | event service: False
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | sizes: {0: 2277178, 1: 2277860, 2: 2277860, 3: 2278349, 4: 2278349, 259: 2301831, 260: 2301963, 264: 2306311, 265: 2306367, 382: 2306561}
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | --------------------------------------------------
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | 
[2026-01-31 19:50:50] 2026-02-01 03:50:09,821 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-31 19:50:50] 2026-02-01 03:50:09,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | job 6995221402 has completed (purged errors)
[2026-01-31 19:50:50] 2026-02-01 03:50:09,882 | INFO     | overall cleanup function is called
[2026-01-31 19:50:50] 2026-02-01 03:50:10,891 | INFO     | --- collectZombieJob: --- 10, [667942]
[2026-01-31 19:50:50] 2026-02-01 03:50:10,891 | INFO     | zombie collector waiting for pid 667942
[2026-01-31 19:50:50] 2026-02-01 03:50:10,891 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 19:50:50] 2026-02-01 03:50:10,891 | INFO     | collected zombie processes
[2026-01-31 19:50:50] 2026-02-01 03:50:10,891 | INFO     | will attempt to kill all subprocesses of pid=667942
[2026-01-31 19:50:50] 2026-02-01 03:50:11,352 | INFO     | process IDs to be killed: [667942] (in reverse order)
[2026-01-31 19:50:50] 2026-02-01 03:50:11,416 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 19:50:50] 2026-02-01 03:50:11,417 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 19:50:50] 2026-02-01 03:50:11,430 | INFO     | did not find any defunct processes belonging to 667942
[2026-01-31 19:50:50] 2026-02-01 03:50:11,435 | INFO     | did not find any defunct processes belonging to 667942
[2026-01-31 19:50:50] 2026-02-01 03:50:11,436 | INFO     | ready for new job
[2026-01-31 19:50:50] 2026-02-01 03:50:11,436 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 19:50:50] 2026-02-01 03:50:11,437 | INFO     | **************************************
[2026-01-31 19:50:50] 2026-02-01 03:50:11,437 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 19:50:50] 2026-02-01 03:50:11,437 | INFO     | **************************************
[2026-01-31 19:50:50] 2026-02-01 03:50:11,437 | INFO     | 
[2026-01-31 19:50:50] 2026-02-01 03:50:11,439 | INFO     | architecture information:
[2026-01-31 19:50:50] 2026-02-01 03:50:11,439 | INFO     | executing command: cat /etc/os-release
[2026-01-31 19:50:50] 2026-02-01 03:50:11,466 | INFO     | cat /etc/os-release:
[2026-01-31 19:50:50] NAME="CentOS Linux"
[2026-01-31 19:50:50] VERSION="7 (Core)"
[2026-01-31 19:50:50] ID="centos"
[2026-01-31 19:50:50] ID_LIKE="rhel fedora"
[2026-01-31 19:50:50] VERSION_ID="7"
[2026-01-31 19:50:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 19:50:50] ANSI_COLOR="0;31"
[2026-01-31 19:50:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 19:50:50] HOME_URL="https://www.centos.org/"
[2026-01-31 19:50:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 19:50:50] 
[2026-01-31 19:50:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 19:50:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 19:50:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 19:50:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 19:50:50] 
[2026-01-31 19:50:50] 2026-02-01 03:50:11,466 | INFO     | **************************************
[2026-01-31 19:50:50] 2026-02-01 03:50:11,970 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-31 19:50:50] 2026-02-01 03:50:12,177 | INFO     | sufficient remaining disk space (1406963548160 B)
[2026-01-31 19:50:50] 2026-02-01 03:50:12,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 19:50:50] 2026-02-01 03:50:12,177 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 19:50:50] 2026-02-01 03:50:12,178 | INFO     | update_server=False
[2026-01-31 19:50:50] 2026-02-01 03:50:12,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 19:50:50] 2026-02-01 03:50:12,361 | INFO     | all data control threads have been joined
[2026-01-31 19:50:50] 2026-02-01 03:50:12,379 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 19:50:50] 2026-02-01 03:50:12,379 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 19:50:50] 2026-02-01 03:50:12,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 19:50:50] 2026-02-01 03:50:12,379 | INFO     | will abort loop
[2026-01-31 19:50:50] 2026-02-01 03:50:12,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 19:50:50] 2026-02-01 03:50:12,632 | INFO     | all job control threads have been joined
[2026-01-31 19:50:50] 2026-02-01 03:50:12,764 | INFO     | all payload control threads have been joined
[2026-01-31 19:50:50] 2026-02-01 03:50:13,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 19:50:50] 2026-02-01 03:50:13,182 | INFO     | [job] retrieve thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,210 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,370 | INFO     | [data] control thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,385 | INFO     | [job] job monitor thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,638 | INFO     | [job] control thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,650 | INFO     | [payload] failed_post thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,777 | INFO     | [payload] control thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,913 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:13,996 | INFO     | [data] copytool_in thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:14,346 | INFO     | [job] validate thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:14,575 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:14,579 | INFO     | [payload] validate_post thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:14,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 19:50:50] 2026-02-01 03:50:15,168 | INFO     | [data] copytool_out thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:15,857 | INFO     | [job] queue monitor thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:16,641 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 19:50:50] 2026-02-01 03:50:41,842 | INFO     | PID=662849 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 19:50:50] 2026-02-01 03:50:41,842 | INFO     | .. there are 26 such processes running
[2026-01-31 19:50:50] 2026-02-01 03:50:41,842 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 19:50:50] 2026-02-01 03:50:41,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 19:50:50] 2026-02-01 03:50:41,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 19:50:50] 2026-02-01 03:50:43,104 | INFO     | [monitor] cgroup control has ended
[2026-01-31 19:50:50] 2026-02-01 03:50:43,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140665148774208)>', '<ExcThread(monitor, started 140664465516288)>']
[2026-01-31 19:50:50] 2026-02-01 03:50:43,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 19:50:50] 2026-02-01 03:50:43,854 | INFO     | [monitor] control thread has ended
[2026-01-31 19:50:50] 2026-02-01 03:50:48,475 | INFO     | all workflow threads have been joined
[2026-01-31 19:50:50] 2026-02-01 03:50:48,475 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 19:50:50] 2026-02-01 03:50:48,475 | INFO     | traces error code: 0
[2026-01-31 19:50:50] 2026-02-01 03:50:48,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 19:50:50] 2026-02-01 03:50:49,423 [wrapper] ==== pilot stdout END ====
[2026-01-31 19:50:50] 2026-02-01 03:50:49,440 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 19:50:50] 2026-02-01 03:50:49,471 [wrapper] pilotpid: 662849
[2026-01-31 19:50:50] 2026-02-01 03:50:49,485 [wrapper] Pilot exit status: 0
[2026-01-31 19:50:50] 2026-02-01 03:50:49,582 [wrapper] pandaids: 6995221402
[2026-01-31 19:50:50] 2026-02-01 03:50:49,900 [wrapper] cleanup supervisor_pilot  662855 662850
[2026-01-31 19:50:50] 2026-02-01 03:50:49,924 [wrapper] Test setup, not cleaning
[2026-01-31 19:50:50] 2026-02-01 03:50:49,969 [wrapper] apfmon messages muted
[2026-01-31 19:50:50] 2026-02-01 03:50:49,971 [wrapper] ==== wrapper stdout END ====
[2026-01-31 19:50:50] 2026-02-01 03:50:49,975 [wrapper] ==== wrapper stderr END ====
[2026-01-31 19:50:50]  *** Error codes and diagnostics ***
[2026-01-31 19:50:51]     "exeErrorCode": 65,
[2026-01-31 19:50:51]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-31 19:50:51]     "pilotErrorCode": 1305,
[2026-01-31 19:50:51]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-31 19:50:51]  *** Listing of results directory ***
[2026-01-31 19:50:51] total 483452
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc      5111 Jan 31 16:37 queuedata.json
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc    584422 Jan 31 16:37 pilot3.tar.gz
[2026-01-31 19:50:51] -rwx------. 1 boinc boinc     36322 Jan 31 16:37 runpilot2-wrapper.sh
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc       100 Jan 31 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 19:50:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan 31 19:41 run_atlas
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc       105 Jan 31 19:41 job.xml
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc      6444 Jan 31 19:41 init_data.xml
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc 490868348 Jan 31 19:41 EVNT.48317869._000296.pool.root.1
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc     15845 Jan 31 19:41 start_atlas.sh
[2026-01-31 19:50:51] drwxrwx--x. 2 boinc boinc      4096 Jan 31 19:41 shared
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc    597753 Jan 31 19:41 input.tar.gz
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc         0 Jan 31 19:41 boinc_lockfile
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc      2518 Jan 31 19:41 pandaJob.out
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc   1010520 Jan 31 19:42 agis_schedconf.cvmfs.json
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc   1511668 Jan 31 19:42 agis_ddmendpoints.agis.ALL.json
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc       442 Jan 31 19:43 workernode_map.json
[2026-01-31 19:50:51] drwx------. 5 boinc boinc      4096 Jan 31 19:43 pilot3
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc       525 Jan 31 19:47 boinc_task_state.xml
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc       986 Jan 31 19:48 memory_monitor_summary.json
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc     24043 Jan 31 19:48 log.48317872._016205.job.log.tgz.1
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc        95 Jan 31 19:50 pilot_heartbeat.json
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc      7059 Jan 31 19:50 heartbeat.json
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc        23 Jan 31 19:50 wrapper_checkpoint.txt
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc      5004 Jan 31 19:50 pilotlog.txt
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc    106405 Jan 31 19:50 log.48317872._016205.job.log.1
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc       188 Jan 31 19:50 output.list
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc       620 Jan 31 19:50 runtime_log
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc    143360 Jan 31 19:50 result.tar.gz
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc       643 Jan 31 19:50 yyzKDmFea68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmx0OKDm6W8Jam.diag
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc      8633 Jan 31 19:50 runtime_log.err
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc      8192 Jan 31 19:50 boinc_mmap_file
[2026-01-31 19:50:51] -rw-r--r--. 1 boinc boinc     21979 Jan 31 19:50 stderr.txt
[2026-01-31 19:50:51] No HITS result produced
[2026-01-31 19:50:51]  *** Contents of shared directory: ***
[2026-01-31 19:50:51] total 480108
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc 490868348 Jan 31 19:41 ATLAS.root_0
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc     15845 Jan 31 19:41 start_atlas.sh
[2026-01-31 19:50:51] -rw-r--r--. 2 boinc boinc    597753 Jan 31 19:41 input.tar.gz
[2026-01-31 19:50:51] -rw-------. 1 boinc boinc    143360 Jan 31 19:50 result.tar.gz
19:50:53 (658787): run_atlas exited; CPU time 30.412583
19:50:53 (658787): called boinc_finish(0)

</stderr_txt>
]]>

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