Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-01 06:16:24 (12796): vboxwrapper version 26210
2026-02-01 06:16:24 (12796): BOINC client version: 8.2.8
2026-02-01 06:16:24 (12796): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2026-02-01 06:16:25 (12796): Successfully copied 'init_data.xml' to the shared directory.
2026-02-01 06:16:25 (12796): Create VM. (boinc_7bd10110273f5c9b, slot#9)
2026-02-01 06:16:26 (12796): Setting Memory Size for VM. (4800MB)
2026-02-01 06:16:26 (12796): Setting CPU Count for VM. (8)
2026-02-01 06:16:26 (12796): Setting Chipset Options for VM.
2026-02-01 06:16:27 (12796): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-01 06:16:27 (12796): Setting Boot Options for VM.
2026-02-01 06:16:27 (12796): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-01 06:16:28 (12796): Enabling VM Network Access.
2026-02-01 06:16:28 (12796): Disabling USB Support for VM.
2026-02-01 06:16:28 (12796): Disabling COM Port Support for VM.
2026-02-01 06:16:28 (12796): Disabling LPT Port Support for VM.
2026-02-01 06:16:29 (12796): Disabling Audio Support for VM.
2026-02-01 06:16:29 (12796): Disabling Clipboard Support for VM.
2026-02-01 06:16:29 (12796): Disabling Drag and Drop Support for VM.
2026-02-01 06:16:29 (12796): Adding storage controller(s) to VM.
2026-02-01 06:16:30 (12796): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-01 06:16:30 (12796): Adding VirtualBox Guest Additions to VM.
2026-02-01 06:16:30 (12796): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-01 06:16:31 (12796): forwarding host port 62977 to guest port 80
2026-02-01 06:16:31 (12796): Enabling remote desktop for VM.
2026-02-01 06:16:31 (12796): Enabling shared directory for VM.
2026-02-01 06:16:32 (12796): Starting VM using VBoxManage interface. (boinc_7bd10110273f5c9b, slot#9)
2026-02-01 06:16:40 (12796): Successfully started VM. (PID = '20836')
2026-02-01 06:16:40 (12796): Reporting VM Process ID to BOINC.
2026-02-01 06:16:40 (12796): Guest Log: BIOS: VirtualBox 7.1.4
2026-02-01 06:16:40 (12796): Guest Log: CPUID EDX: 0x178bfbff
2026-02-01 06:16:40 (12796): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-01 06:16:40 (12796): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-01 06:16:40 (12796): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-01 06:16:40 (12796): Detected: Web Application Enabled (http://localhost:62977)
2026-02-01 06:16:40 (12796): Detected: Remote Desktop Enabled (localhost:62978)
2026-02-01 06:16:40 (12796): Preference change detected
2026-02-01 06:16:40 (12796): Setting CPU throttle for VM. (100%)
2026-02-01 06:16:41 (12796): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-01 06:16:42 (12796): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-01 06:16:42 (12796): Guest Log: BIOS: Booting from Hard Disk...
2026-02-01 06:16:46 (12796): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-01 06:16:46 (12796): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-01 06:16:46 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-01 06:16:47 (12796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-01 06:16:56 (12796): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-01 06:16:56 (12796): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-01 06:17:12 (12796): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000367 main     Log opened 2026-02-01T06:17:10.333298000Z
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000572 main     OS Product: Linux
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000648 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000714 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000781 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000784 main     Process ID: 1400
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.000786 main     Package type: LINUX_64BITS_GENERIC
2026-02-01 06:17:12 (12796): Guest Log: 00:00:00.003495 main     5.2.32 r132073 started. Verbose level = 0
2026-02-01 06:17:13 (12796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-01 06:17:13 (12796): Guest Log: [INFO] Mounting shared directory
2026-02-01 06:17:13 (12796): Guest Log: [INFO] Checking for init_data.xml
2026-02-01 06:17:22 (12796): Guest Log: 00:00:10.013553 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 510 922 000ns (GuestNow=1 769 923 041 828 750 000 ns GuestLast=1 769 926 630 339 672 000 ns fSetTimeLastLoop=true )
2026-02-01 06:17:32 (12796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-01 06:17:32 (12796): Guest Log: [INFO] Detected branch: prod
2026-02-01 06:17:34 (12796): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-01 06:17:34 (12796): Guest Log: Copying input files
2026-02-01 06:17:40 (12796): Guest Log: Copied input files into RunAtlas.
2026-02-01 06:17:40 (12796): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-01 06:17:40 (12796): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-01 06:17:40 (12796): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-01 06:17:40 (12796): Guest Log: Further information can be found at the LHC@home message board.
2026-02-01 06:17:58 (12796): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-01 06:18:00 (12796): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-01 06:18:00 (12796): Guest Log: 2.6.3.0 1682 0 32164 155740 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-01 06:18:01 (12796): Guest Log: copied the webapp to /var/www
2026-02-01 06:18:01 (12796): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-01 06:18:01 (12796): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-01 06:18:03 (12796): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-01 06:18:03 (12796): Guest Log:  *** Starting ATLAS job. (PandaID=6994936899 taskID=48317892) ***
2026-02-01 07:56:46 (12796): Status Report: Elapsed Time: '6000.000000'
2026-02-01 07:56:46 (12796): Status Report: CPU Time: '36048.953125'
2026-02-01 09:36:52 (12796): Status Report: Elapsed Time: '12000.000000'
2026-02-01 09:36:52 (12796): Status Report: CPU Time: '81608.734375'
2026-02-01 11:16:58 (12796): Status Report: Elapsed Time: '18000.000000'
2026-02-01 11:16:58 (12796): Status Report: CPU Time: '127249.421875'
2026-02-01 11:36:01 (12796): VM state change detected. (old = 'running', new = 'paused')
2026-02-01 12:36:01 (12796): VM state change detected. (old = 'paused', new = 'running')
2026-02-01 12:36:05 (12796): Guest Log: 05:18:53.425542 timesync vgsvcTimeSyncWorker: Radical host time change: 3 610 327 000 000ns (HostNow=1 769 945 765 575 000 000 ns HostLast=1 769 942 155 248 000 000 ns)
2026-02-01 12:36:15 (12796): Guest Log: 05:19:03.427174 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 610 337 277 000ns (GuestNow=1 769 945 775 577 358 000 ns GuestLast=1 769 942 165 240 081 000 ns fSetTimeLastLoop=true )
2026-02-01 12:41:06 (12796): Guest Log:  *** Job finished ***
2026-02-01 12:41:06 (12796): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:33,572 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:33,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:55,878 | INFO     | [monitor] cgroup control has ended
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:57,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140093227628352)>', '<ExcThread(monitor, started 140092437952256)>']
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:58,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:40:58,347 | INFO     | [monitor] control thread has ended
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,005 | INFO     | all workflow threads have been joined
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,005 | INFO     | end of generic workflow (traces error code: 0)
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,006 | INFO     | traces error code: 0
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,198 [wrapper] ==== pilot stdout END ====
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,209 [wrapper] ==== wrapper stdout RESUME ====
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,220 [wrapper] pilotpid: 6125
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,230 [wrapper] Pilot exit status: 0
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,429 [wrapper] pandaids: 6994936899
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,518 [wrapper] cleanup supervisor_pilot 29955 6126
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,546 [wrapper] Test setup, not cleaning
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,557 [wrapper] apfmon messages muted
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,566 [wrapper] ==== wrapper stdout END ====
2026-02-01 12:41:06 (12796): Guest Log: 2026-02-01 11:41:03,577 [wrapper] ==== wrapper stderr END ====
2026-02-01 12:41:06 (12796): Guest Log:  *** Error codes and diagnostics ***
2026-02-01 12:41:06 (12796): Guest Log:     "exeErrorCode": 0,
2026-02-01 12:41:06 (12796): Guest Log:     "exeErrorDiag": "",
2026-02-01 12:41:06 (12796): Guest Log:     "pilotErrorCode": 0,
2026-02-01 12:41:06 (12796): Guest Log:     "pilotErrorDiag": "",
2026-02-01 12:41:06 (12796): Guest Log:  *** Listing of results directory ***
2026-02-01 12:41:06 (12796): Guest Log: total 191432
2026-02-01 12:41:06 (12796): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 31 18:13 pilot3.tar.gz
2026-02-01 12:41:06 (12796): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 31 18:14 runpilot2-wrapper.sh
2026-02-01 12:41:06 (12796): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 31 18:15 queuedata.json
2026-02-01 12:41:06 (12796): Guest Log: -rwxr-xr-x. 1 atlas atlas      5959 Feb  1 05:17 init_data.xml
2026-02-01 12:41:06 (12796): Guest Log: -rwxr-xr-x. 1 atlas atlas    597751 Feb  1 05:17 input.tar.gz
2026-02-01 12:41:06 (12796): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  1 05:17 start_atlas.sh
2026-02-01 12:41:06 (12796): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 05:17 EVNT.48317889._000088.pool.root.1 -> /data/./ATLAS.root_0
2026-02-01 12:41:06 (12796): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Feb  1 05:18 pandaJob.out
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas   1010528 Feb  1 05:20 agis_schedconf.cvmfs.json
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas       422 Feb  1 05:20 workernode_map.json
2026-02-01 12:41:06 (12796): Guest Log: drwx------. 5 atlas atlas      4096 Feb  1 05:20 pilot3
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas 185825064 Feb  1 11:38 HITS.48317892._004521.pool.root.1
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas      1033 Feb  1 11:39 memory_monitor_summary.json
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  1 11:39 agis_ddmendpoints.agis.ALL.json
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas    523572 Feb  1 11:39 log.48317892._004521.job.log.tgz.1
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas      6342 Feb  1 11:40 heartbeat.json
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas        97 Feb  1 11:40 pilot_heartbeat.json
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas      4917 Feb  1 11:41 pilotlog.txt
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas   2642656 Feb  1 11:41 log.48317892._004521.job.log.1
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 11:41 output.list
2026-02-01 12:41:06 (12796): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 11:41 runtime_log
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas   3184640 Feb  1 11:41 result.tar.gz
2026-02-01 12:41:06 (12796): Guest Log: -rw-r--r--. 1 atlas atlas      8814 Feb  1 11:41 runtime_log.err
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas       681 Feb  1 11:41 rGvNDmTfU68n9Rq4apOajLDm4fhM0noT9bVooX4SDmt8NKDmZ3Be9m.diag
2026-02-01 12:41:06 (12796): Guest Log: Looking for outputfile HITS.48317892._004521.pool.root.1
2026-02-01 12:41:06 (12796): Guest Log: HITS file was successfully produced
2026-02-01 12:41:06 (12796): Guest Log: -rw-------. 1 atlas atlas 185825064 Feb  1 11:38 /home/atlas/RunAtlas/HITS.48317892._004521.pool.root.1
2026-02-01 12:41:08 (12796): Guest Log: Successfully finished the ATLAS job!
2026-02-01 12:41:08 (12796): Guest Log: Copying the results back to the shared directory!
2026-02-01 12:41:08 (12796): Guest Log:  *** Contents of shared directory: ***
2026-02-01 12:41:08 (12796): Guest Log: total 671848
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root 498332061 Feb  1 05:16 ATLAS.root_0
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root 185825064 Feb  1 11:41 HITS.pool.root.1
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root      5959 Feb  1 05:16 init_data.xml
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root    597751 Feb  1 00:09 input.tar.gz
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root   3184640 Feb  1 11:41 result.tar.gz
2026-02-01 12:41:08 (12796): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  1 00:09 start_atlas.sh
2026-02-01 12:41:09 (12796): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-01 12:41:09 (12796): VM Completion File Detected.
2026-02-01 12:41:09 (12796): Powering off VM.
2026-02-01 12:41:10 (12796): Successfully stopped VM.
2026-02-01 12:41:10 (12796): Deregistering VM. (boinc_7bd10110273f5c9b, slot#9)
2026-02-01 12:41:10 (12796): Removing network bandwidth throttle group from VM.
2026-02-01 12:41:10 (12796): Removing VM from VirtualBox.
2026-02-01 12:41:15 (12796): called boinc_finish(0)

</stderr_txt>
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