Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:52:08 (829924): wrapper (7.7.26015): starting
12:52:08 (829924): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 12:52:08] Arguments: --nthreads 3
[2026-02-01 12:52:08] Threads: 3
[2026-02-01 12:52:08] Checking for CVMFS
[2026-02-01 12:52:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:52:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:52:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:52:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:52:09] 2.9.2.0 4027610 5734 87064 155749 1 50 25053992 36864001 0 130560 0 2600980 99.987 178338 12713 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 12:52:09] CVMFS is ok
[2026-02-01 12:52:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:52:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 12:52:09] Further information can be found at the LHC@home message board.
[2026-02-01 12:52:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:52:09] Checking for apptainer binary...
[2026-02-01 12:52:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:52:09] Running /usr/bin/apptainer --version
[2026-02-01 12:52:09] apptainer version 1.4.1-1.1
[2026-02-01 12:52:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:52:09] magicA246a
[2026-02-01 12:52:09] apptainer works
[2026-02-01 12:52:09] Set ATHENA_PROC_NUMBER=3
[2026-02-01 12:52:09] Set ATHENA_CORE_NUMBER=3
[2026-02-01 12:52:09] Starting ATLAS job with PandaID=6994936264
[2026-02-01 12:52:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 14:20:29]  *** The last 200 lines of the pilot log: ***
[2026-02-01 14:20:29] 2026-02-01 13:19:53,995 | INFO     | all payload control threads have been joined
[2026-02-01 14:20:29] 2026-02-01 13:19:54,462 | INFO     | [job] retrieve thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:54,462 | INFO     | [job] queue monitor thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:54,505 | INFO     | [data] copytool_in thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:54,551 | INFO     | all job control threads have been joined
[2026-02-01 14:20:29] 2026-02-01 13:19:54,560 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:54,561 | INFO     | all data control threads have been joined
[2026-02-01 14:20:29] 2026-02-01 13:19:54,784 | INFO     | [payload] validate_post thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,000 | INFO     | [payload] control thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,555 | INFO     | [job] control thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,566 | INFO     | [data] control thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,686 | INFO     | [job] validate thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,701 | INFO     | [payload] failed_post thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,795 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,796 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:55,905 | INFO     | [data] copytool_out thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:57,042 | WARNING  | process 838399 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 14:20:29] 2026-02-01 13:19:57,082 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 14:20:29] 2026-02-01 13:19:57,132 | INFO     | number of running child processes to parent process 838399: 1
[2026-02-01 14:20:29] 2026-02-01 13:19:57,132 | INFO     | maximum number of monitored processes: 6
[2026-02-01 14:20:29] 2026-02-01 13:19:57,132 | INFO     | aborting job monitoring since job object (job id=6994936264) has expired
[2026-02-01 14:20:29] 2026-02-01 13:19:57,132 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 14:20:29] 2026-02-01 13:19:57,132 | INFO     | will abort loop
[2026-02-01 14:20:29] 2026-02-01 13:19:57,462 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:19:58,137 | INFO     | [job] job monitor thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:20:04,224 | INFO     | job.realtimelogging is not enabled
[2026-02-01 14:20:29] 2026-02-01 13:20:05,229 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 14:20:29] 2026-02-01 13:20:24,340 | INFO     | [monitor] cgroup control has ended
[2026-02-01 14:20:29] 2026-02-01 13:20:24,393 | INFO     | PID=833969 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 14:20:29] 2026-02-01 13:20:24,393 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 14:20:29] 2026-02-01 13:20:24,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 14:20:29] 2026-02-01 13:20:24,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 14:20:29] 2026-02-01 13:20:24,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865599461184)>', '<ExcThread(monitor, started 139865115051776)>']
[2026-02-01 14:20:29] 2026-02-01 13:20:25,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 14:20:29] 2026-02-01 13:20:25,398 | INFO     | [monitor] control thread has ended
[2026-02-01 14:20:29] 2026-02-01 13:20:29,780 | INFO     | all workflow threads have been joined
[2026-02-01 14:20:29] 2026-02-01 13:20:29,780 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 14:20:29] 2026-02-01 13:20:29,780 | INFO     | traces error code: 0
[2026-02-01 14:20:29] 2026-02-01 13:20:29,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 14:20:29] 2026-02-01 13:20:29,834 [wrapper] ==== pilot stdout END ====
[2026-02-01 14:20:29] 2026-02-01 13:20:29,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 14:20:29] 2026-02-01 13:20:29,839 [wrapper] pilotpid: 833969
[2026-02-01 14:20:29] 2026-02-01 13:20:29,841 [wrapper] Pilot exit status: 0
[2026-02-01 14:20:29] 2026-02-01 13:20:29,849 [wrapper] pandaids: 6994936264
[2026-02-01 14:20:29] 2026-02-01 13:20:29,867 [wrapper] cleanup supervisor_pilot  844673 833970
[2026-02-01 14:20:29] 2026-02-01 13:20:29,870 [wrapper] Test setup, not cleaning
[2026-02-01 14:20:29] 2026-02-01 13:20:29,872 [wrapper] apfmon messages muted
[2026-02-01 14:20:29] 2026-02-01 13:20:29,874 [wrapper] ==== wrapper stdout END ====
[2026-02-01 14:20:29] 2026-02-01 13:20:29,877 [wrapper] ==== wrapper stderr END ====
[2026-02-01 14:20:29]  *** Error codes and diagnostics ***
[2026-02-01 14:20:29]     "exeErrorCode": 0,
[2026-02-01 14:20:29]     "exeErrorDiag": "",
[2026-02-01 14:20:29]     "pilotErrorCode": 0,
[2026-02-01 14:20:29]     "pilotErrorDiag": "",
[2026-02-01 14:20:29]  *** Listing of results directory ***
[2026-02-01 14:20:29] total 672348
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      5111 Jan 31 19:13 queuedata.json
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc    584422 Jan 31 19:13 pilot3.tar.gz
[2026-02-01 14:20:29] -rwx------ 1 boinc boinc     36322 Jan 31 19:14 runpilot2-wrapper.sh
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc       100 Feb  1 12:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 14:20:29] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 12:52 run_atlas
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc       105 Feb  1 12:52 job.xml
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc 494648320 Feb  1 12:52 EVNT.48317889._000081.pool.root.1
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc    597753 Feb  1 12:52 input.tar.gz
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc     15845 Feb  1 12:52 start_atlas.sh
[2026-02-01 14:20:29] drwxrwx--x 2 boinc boinc      4096 Feb  1 12:52 shared
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc         0 Feb  1 12:52 boinc_setup_complete
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      6447 Feb  1 12:52 init_data.xml
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc         0 Feb  1 12:52 boinc_lockfile
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      2521 Feb  1 12:52 pandaJob.out
[2026-02-01 14:20:29] -rw------- 1 boinc boinc   1010520 Feb  1 12:52 agis_schedconf.cvmfs.json
[2026-02-01 14:20:29] -rw------- 1 boinc boinc   1511668 Feb  1 12:52 agis_ddmendpoints.agis.ALL.json
[2026-02-01 14:20:29] -rw------- 1 boinc boinc       428 Feb  1 12:52 workernode_map.json
[2026-02-01 14:20:29] drwx------ 5 boinc boinc      4096 Feb  1 12:52 pilot3
[2026-02-01 14:20:29] -rw------- 1 boinc boinc 187798948 Feb  1 14:19 HITS.48317892._004207.pool.root.1
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc       530 Feb  1 14:19 boinc_task_state.xml
[2026-02-01 14:20:29] -rw------- 1 boinc boinc        95 Feb  1 14:19 pilot_heartbeat.json
[2026-02-01 14:20:29] -rw------- 1 boinc boinc      1019 Feb  1 14:19 memory_monitor_summary.json
[2026-02-01 14:20:29] -rw------- 1 boinc boinc    288225 Feb  1 14:19 log.48317892._004207.job.log.tgz.1
[2026-02-01 14:20:29] -rw------- 1 boinc boinc      6307 Feb  1 14:19 heartbeat.json
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      8192 Feb  1 14:20 boinc_mmap_file
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc        27 Feb  1 14:20 wrapper_checkpoint.txt
[2026-02-01 14:20:29] -rw------- 1 boinc boinc      5341 Feb  1 14:20 pilotlog.txt
[2026-02-01 14:20:29] -rw------- 1 boinc boinc    765310 Feb  1 14:20 log.48317892._004207.job.log.1
[2026-02-01 14:20:29] -rw------- 1 boinc boinc       357 Feb  1 14:20 output.list
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc       620 Feb  1 14:20 runtime_log
[2026-02-01 14:20:29] -rw------- 1 boinc boinc   1075200 Feb  1 14:20 result.tar.gz
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      8916 Feb  1 14:20 runtime_log.err
[2026-02-01 14:20:29] -rw------- 1 boinc boinc       661 Feb  1 14:20 6z1KDmFfU68n9Rq4apOajLDm4fhM0noT9bVooX4SDm06NKDm4m0rUm.diag
[2026-02-01 14:20:29] -rw-r--r-- 1 boinc boinc      7531 Feb  1 14:20 stderr.txt
[2026-02-01 14:20:29] HITS file was successfully produced:
[2026-02-01 14:20:29] -rw------- 1 boinc boinc 187798948 Feb  1 14:19 shared/HITS.pool.root.1
[2026-02-01 14:20:29]  *** Contents of shared directory: ***
[2026-02-01 14:20:29] total 668116
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc 494648320 Feb  1 12:52 ATLAS.root_0
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc    597753 Feb  1 12:52 input.tar.gz
[2026-02-01 14:20:29] -rw-r--r-- 2 boinc boinc     15845 Feb  1 12:52 start_atlas.sh
[2026-02-01 14:20:29] -rw------- 1 boinc boinc 187798948 Feb  1 14:19 HITS.pool.root.1
[2026-02-01 14:20:29] -rw------- 1 boinc boinc   1075200 Feb  1 14:20 result.tar.gz
14:20:31 (829924): run_atlas exited; CPU time 15165.939471
14:20:31 (829924): called boinc_finish(0)

</stderr_txt>
]]>

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