Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-01 17:10:22 (11476): vboxwrapper version 26210
2026-02-01 17:10:22 (11476): BOINC client version: 8.2.8
2026-02-01 17:10:22 (11476): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-01 17:10:22 (11476): Successfully copied 'init_data.xml' to the shared directory.
2026-02-01 17:10:23 (11476): Create VM. (boinc_24ad1cd85507a653, slot#3)
2026-02-01 17:10:23 (11476): Setting Memory Size for VM. (4800MB)
2026-02-01 17:10:23 (11476): Setting CPU Count for VM. (8)
2026-02-01 17:10:24 (11476): Setting Chipset Options for VM.
2026-02-01 17:10:24 (11476): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-01 17:10:24 (11476): Setting Boot Options for VM.
2026-02-01 17:10:25 (11476): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-01 17:10:25 (11476): Enabling VM Network Access.
2026-02-01 17:10:25 (11476): Disabling USB Support for VM.
2026-02-01 17:10:25 (11476): Disabling COM Port Support for VM.
2026-02-01 17:10:26 (11476): Disabling LPT Port Support for VM.
2026-02-01 17:10:26 (11476): Disabling Audio Support for VM.
2026-02-01 17:10:26 (11476): Disabling Clipboard Support for VM.
2026-02-01 17:10:26 (11476): Disabling Drag and Drop Support for VM.
2026-02-01 17:10:27 (11476): Adding storage controller(s) to VM.
2026-02-01 17:10:27 (11476): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-01 17:10:27 (11476): Adding VirtualBox Guest Additions to VM.
2026-02-01 17:10:28 (11476): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-01 17:10:28 (11476): forwarding host port 63002 to guest port 80
2026-02-01 17:10:28 (11476): Enabling remote desktop for VM.
2026-02-01 17:10:28 (11476): Required extension pack not installed, remote desktop not enabled.
2026-02-01 17:10:28 (11476): Enabling shared directory for VM.
2026-02-01 17:10:29 (11476): Starting VM using VBoxManage interface. (boinc_24ad1cd85507a653, slot#3)
2026-02-01 17:10:34 (11476): Successfully started VM. (PID = '3704')
2026-02-01 17:10:34 (11476): Reporting VM Process ID to BOINC.
2026-02-01 17:10:34 (11476): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-01 17:10:34 (11476): Guest Log: CPUID EDX: 0x178bfbff
2026-02-01 17:10:34 (11476): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-01 17:10:34 (11476): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-01 17:10:34 (11476): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-01 17:10:34 (11476): Detected: Web Application Enabled (http://localhost:63002)
2026-02-01 17:10:34 (11476): Preference change detected
2026-02-01 17:10:34 (11476): Setting CPU throttle for VM. (100%)
2026-02-01 17:10:34 (11476): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-01 17:10:36 (11476): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-01 17:10:36 (11476): Guest Log: BIOS: Booting from Hard Disk...
2026-02-01 17:10:39 (11476): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-01 17:10:39 (11476): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-01 17:10:39 (11476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-01 17:11:54 (11476): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-01 17:11:54 (11476): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-01 17:12:05 (11476): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000197 main     Log opened 2026-02-01T17:12:04.155426000Z
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000316 main     OS Product: Linux
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000350 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000379 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000407 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000408 main     Process ID: 1386
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.000408 main     Package type: LINUX_64BITS_GENERIC
2026-02-01 17:12:05 (11476): Guest Log: 00:00:00.001238 main     5.2.32 r132073 started. Verbose level = 0
2026-02-01 17:12:05 (11476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-01 17:12:05 (11476): Guest Log: [INFO] Mounting shared directory
2026-02-01 17:12:06 (11476): Guest Log: [INFO] Checking for init_data.xml
2026-02-01 17:12:14 (11476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-01 17:12:14 (11476): Guest Log: [INFO] Detected branch: prod
2026-02-01 17:12:14 (11476): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-01 17:12:14 (11476): Guest Log: Copying input files
2026-02-01 17:12:15 (11476): Guest Log: 00:00:10.003019 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 607 874 330 000ns (GuestNow=1 769 962 316 283 421 000 ns GuestLast=1 769 965 924 157 751 000 ns fSetTimeLastLoop=true )
2026-02-01 17:12:17 (11476): Guest Log: Copied input files into RunAtlas.
2026-02-01 17:12:17 (11476): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-01 17:12:17 (11476): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-01 17:12:17 (11476): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-01 17:12:17 (11476): Guest Log: Further information can be found at the LHC@home message board.
2026-02-01 17:12:35 (11476): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-01 17:12:36 (11476): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-01 17:12:36 (11476): Guest Log: 2.6.3.0 1664 0 32176 155755 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-01 17:12:37 (11476): Guest Log: copied the webapp to /var/www
2026-02-01 17:12:37 (11476): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-01 17:12:37 (11476): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-01 17:12:38 (11476): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-01 17:12:38 (11476): Guest Log:  *** Starting ATLAS job. (PandaID=6994939688 taskID=48317952) ***
2026-02-01 18:50:40 (11476): Status Report: Elapsed Time: '6000.000000'
2026-02-01 18:50:40 (11476): Status Report: CPU Time: '39347.390625'
2026-02-01 19:13:24 (11476): Guest Log:  *** Job finished ***
2026-02-01 19:13:24 (11476): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:46,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:46,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:56,130 | INFO     | [monitor] cgroup control has ended
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:57,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723042441024)>', '<ExcThread(monitor, started 139722290603776)>']
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:57,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:12:57,713 | INFO     | [monitor] control thread has ended
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,088 | INFO     | all workflow threads have been joined
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,089 | INFO     | end of generic workflow (traces error code: 0)
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,089 | INFO     | traces error code: 0
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,190 [wrapper] ==== pilot stdout END ====
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,196 [wrapper] ==== wrapper stdout RESUME ====
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,202 [wrapper] pilotpid: 6135
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,208 [wrapper] Pilot exit status: 0
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,754 [wrapper] pandaids: 6994939688
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,797 [wrapper] cleanup supervisor_pilot 25994 6136
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,804 [wrapper] Test setup, not cleaning
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,811 [wrapper] apfmon messages muted
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,818 [wrapper] ==== wrapper stdout END ====
2026-02-01 19:13:24 (11476): Guest Log: 2026-02-01 18:13:02,824 [wrapper] ==== wrapper stderr END ====
2026-02-01 19:13:24 (11476): Guest Log:  *** Error codes and diagnostics ***
2026-02-01 19:13:24 (11476): Guest Log:     "exeErrorCode": 0,
2026-02-01 19:13:24 (11476): Guest Log:     "exeErrorDiag": "",
2026-02-01 19:13:24 (11476): Guest Log:     "pilotErrorCode": 0,
2026-02-01 19:13:24 (11476): Guest Log:     "pilotErrorDiag": "",
2026-02-01 19:13:24 (11476): Guest Log:  *** Listing of results directory ***
2026-02-01 19:13:24 (11476): Guest Log: total 188964
2026-02-01 19:13:24 (11476): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 31 23:05 pilot3.tar.gz
2026-02-01 19:13:24 (11476): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 31 23:08 runpilot2-wrapper.sh
2026-02-01 19:13:24 (11476): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 31 23:11 queuedata.json
2026-02-01 19:13:24 (11476): Guest Log: -rwxr-xr-x. 1 atlas atlas    597755 Feb  1 16:11 input.tar.gz
2026-02-01 19:13:24 (11476): Guest Log: -rwxr-xr-x. 1 atlas atlas      8496 Feb  1 16:11 init_data.xml
2026-02-01 19:13:24 (11476): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  1 16:11 start_atlas.sh
2026-02-01 19:13:24 (11476): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 16:11 EVNT.48317949._000106.pool.root.1 -> /data/./ATLAS.root_0
2026-02-01 19:13:24 (11476): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Feb  1 16:12 pandaJob.out
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas   1010520 Feb  1 16:15 agis_schedconf.cvmfs.json
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  1 16:15 agis_ddmendpoints.agis.ALL.json
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas       433 Feb  1 16:16 workernode_map.json
2026-02-01 19:13:24 (11476): Guest Log: drwx------. 5 atlas atlas      4096 Feb  1 16:16 pilot3
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas 186980757 Feb  1 18:11 HITS.48317952._005609.pool.root.1
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas      1029 Feb  1 18:12 memory_monitor_summary.json
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas    355853 Feb  1 18:12 log.48317952._005609.job.log.tgz.1
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas      6354 Feb  1 18:12 heartbeat.json
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas        95 Feb  1 18:12 pilot_heartbeat.json
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas      4873 Feb  1 18:13 pilotlog.txt
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas    968086 Feb  1 18:13 log.48317952._005609.job.log.1
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 18:13 output.list
2026-02-01 19:13:24 (11476): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 18:13 runtime_log
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas   1341440 Feb  1 18:13 result.tar.gz
2026-02-01 19:13:24 (11476): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Feb  1 18:13 runtime_log.err
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas       649 Feb  1 18:13 OMNMDmIGZ68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1vOKDm5kIDTo.diag
2026-02-01 19:13:24 (11476): Guest Log: Looking for outputfile HITS.48317952._005609.pool.root.1
2026-02-01 19:13:24 (11476): Guest Log: HITS file was successfully produced
2026-02-01 19:13:24 (11476): Guest Log: -rw-------. 1 atlas atlas 186980757 Feb  1 18:11 /home/atlas/RunAtlas/HITS.48317952._005609.pool.root.1
2026-02-01 19:13:25 (11476): Guest Log: Successfully finished the ATLAS job!
2026-02-01 19:13:25 (11476): Guest Log: Copying the results back to the shared directory!
2026-02-01 19:13:25 (11476): Guest Log:  *** Contents of shared directory: ***
2026-02-01 19:13:25 (11476): Guest Log: total 664844
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root 491844093 Feb  1 16:10 ATLAS.root_0
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root 186980757 Feb  1  2026 HITS.pool.root.1
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root      8496 Feb  1 16:10 init_data.xml
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root    597755 Feb  1 04:02 input.tar.gz
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root   1341440 Feb  1  2026 result.tar.gz
2026-02-01 19:13:25 (11476): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  1 04:02 start_atlas.sh
2026-02-01 19:13:25 (11476): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-01 19:13:25 (11476): VM Completion File Detected.
2026-02-01 19:13:25 (11476): Powering off VM.
2026-02-01 19:13:26 (11476): Successfully stopped VM.
2026-02-01 19:13:26 (11476): Deregistering VM. (boinc_24ad1cd85507a653, slot#3)
2026-02-01 19:13:26 (11476): Removing network bandwidth throttle group from VM.
2026-02-01 19:13:27 (11476): Removing VM from VirtualBox.
2026-02-01 19:13:32 (11476): called boinc_finish(0)

</stderr_txt>
]]>

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