Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:38:38 (1398914): wrapper (7.7.26015): starting
07:38:38 (1398914): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 07:38:38] Arguments: --nthreads 4
[2026-02-01 07:38:38] Threads: 4
[2026-02-01 07:38:38] Checking for CVMFS
[2026-02-01 07:38:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 07:38:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 07:38:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 07:38:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 07:38:39] 2.9.2.0 479791 5276 104676 155741 3 50 18432610 36864001 0 130560 0 2585789 99.987 168685 13491 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 07:38:39] CVMFS is ok
[2026-02-01 07:38:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 07:38:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 07:38:39] Further information can be found at the LHC@home message board.
[2026-02-01 07:38:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 07:38:39] Checking for apptainer binary...
[2026-02-01 07:38:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 07:38:39] Running /usr/bin/apptainer --version
[2026-02-01 07:38:39] apptainer version 1.4.1-1.1
[2026-02-01 07:38:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 07:38:39] cosA131b
[2026-02-01 07:38:39] apptainer works
[2026-02-01 07:38:39] Set ATHENA_PROC_NUMBER=4
[2026-02-01 07:38:39] Set ATHENA_CORE_NUMBER=4
[2026-02-01 07:38:39] Starting ATLAS job with PandaID=6994861585
[2026-02-01 07:38:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 08:53:09]  *** The last 200 lines of the pilot log: ***
[2026-02-01 08:53:09]  is_altstaged=None
[2026-02-01 08:53:09]  is_tar=False
[2026-02-01 08:53:09]  lfn=log.48317892._003747.job.log.tgz.1
[2026-02-01 08:53:09]  mtime=0
[2026-02-01 08:53:09]  protocol_id=None
[2026-02-01 08:53:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 08:53:09]  replicas=None
[2026-02-01 08:53:09]  scope=mc23_13p6TeV
[2026-02-01 08:53:09]  status=None
[2026-02-01 08:53:09]  status_code=0
[2026-02-01 08:53:09]  storage_token=
[2026-02-01 08:53:09]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6994861585/log.48317892._003747.job.log.tgz.1
[2026-02-01 08:53:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/b9/log.48317892._003747.job.log.tgz.1
[2026-02-01 08:53:09]  workdir=None
[2026-02-01 08:53:09] ]
[2026-02-01 08:53:09] 2026-02-01 07:52:34,056 | INFO     | transferring file log.48317892._003747.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6994861585/log.48317892._003747.job.log.tgz.1 to /local/data/boinc/
[2026-02-01 08:53:09] 2026-02-01 07:52:34,057 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6994861585/log.48317892._003747.job.log.tgz.1 /local/data/boinc/slots/0/log.48317892._0037
[2026-02-01 08:53:09] 2026-02-01 07:52:34,075 | INFO     | adding to output.list: log.48317892._003747.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/b9/log.48317892._003747.job.log.tg
[2026-02-01 08:53:09] 2026-02-01 07:52:34,076 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 08:53:09] 2026-02-01 07:52:34,076 | INFO     | summary of transferred files:
[2026-02-01 08:53:09] 2026-02-01 07:52:34,076 | INFO     |  -- lfn=log.48317892._003747.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 08:53:09] 2026-02-01 07:52:34,076 | INFO     | stage-out finished correctly
[2026-02-01 08:53:09] 2026-02-01 07:52:34,242 | INFO     | time since job start (4422s) is within the limit (349056.0s)
[2026-02-01 08:53:09] 2026-02-01 07:52:35,303 | INFO     | PID=1403029 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 08:53:09] 2026-02-01 07:52:36,303 | INFO     | time since job start (4424s) is within the limit (349056.0s)
[2026-02-01 08:53:09] 2026-02-01 07:52:36,796 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 08:53:09] 2026-02-01 07:52:37,060 | INFO     | job 6994861585 has state=finished
[2026-02-01 08:53:09] 2026-02-01 07:52:37,060 | INFO     | preparing for final server update for job 6994861585 in state='finished'
[2026-02-01 08:53:09] 2026-02-01 07:52:37,060 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6994861585/jobReport.json
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | this job has now completed (state=finished)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | log transfer has been attempted: DONE
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | job 6994861585 has finished - writing final server update
[2026-02-01 08:53:09] 2026-02-01 07:52:37,062 | INFO     | total number of processed events: 400 (read)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,064 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994861585/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,064 | INFO     | extracted standard info from prmon json
[2026-02-01 08:53:09] 2026-02-01 07:52:37,064 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 08:53:09] 2026-02-01 07:52:37,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 08:53:09] 2026-02-01 07:52:37,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 08:53:09] 2026-02-01 07:52:37,065 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 08:53:09] 2026-02-01 07:52:37,065 | INFO     | fitting pss+swap vs Time
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | sum of square deviations: 89127252.5
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | sum of deviations: -8777745609.000002
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | mean x: 1769930239.5
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | mean y: 2486680.0606060605
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | intersect: 174315022433.44812
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | chi2: 0.07044706441737314
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | current memory leak: -98.49 B/s (using 66 data points, chi2=0.07)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | could have reported an average CPU frequency of 3795 MHz (6 samples)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | ..............................
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . Timing measurements:
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . get job = 0 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . initial setup = 4 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . payload setup = 4 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . stage-in = 0 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . payload execution = 4402 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . stage-out = 0 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | . log creation = 0 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,066 | INFO     | ..............................
[2026-02-01 08:53:09] 2026-02-01 07:52:37,102 | INFO     | 
[2026-02-01 08:53:09] 2026-02-01 07:52:37,102 | INFO     | job summary report
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | --------------------------------------------------
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | PanDA job id: 6994861585
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | task id: 48317892
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | errors: (none)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | pilot state: finished 
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | transexitcode: 0
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | exeerrorcode: 0
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | exeerrordiag: 
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | exitcode: 0
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | exitmsg: OK
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | cpuconsumptiontime: 16664 s
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | nevents: 400
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | neventsw: 0
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | pid: 1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | pgrp: 1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | corecount: 4
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | event service: False
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | sizes: {0: 2278224, 10: 2278224, 4409: 2304463, 4410: 2313467, 4413: 2313717}
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | --------------------------------------------------
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | 
[2026-02-01 08:53:09] 2026-02-01 07:52:37,103 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,124 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,124 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,124 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 08:53:09] 2026-02-01 07:52:37,124 | INFO     | job 6994861585 has completed (purged errors)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,124 | INFO     | overall cleanup function is called
[2026-02-01 08:53:09] 2026-02-01 07:52:37,525 | WARNING  | process 1407533 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 08:53:09] 2026-02-01 07:52:37,555 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 08:53:09] 2026-02-01 07:52:37,592 | INFO     | number of running child processes to parent process 1407533: 1
[2026-02-01 08:53:09] 2026-02-01 07:52:37,592 | INFO     | maximum number of monitored processes: 6
[2026-02-01 08:53:09] 2026-02-01 07:52:37,592 | INFO     | aborting job monitoring since job object (job id=6994861585) has expired
[2026-02-01 08:53:09] 2026-02-01 07:52:38,131 | INFO     | --- collectZombieJob: --- 10, [1407533]
[2026-02-01 08:53:09] 2026-02-01 07:52:38,131 | INFO     | zombie collector waiting for pid 1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:38,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 08:53:09] 2026-02-01 07:52:38,131 | INFO     | collected zombie processes
[2026-02-01 08:53:09] 2026-02-01 07:52:38,131 | INFO     | will attempt to kill all subprocesses of pid=1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:38,171 | INFO     | process IDs to be killed: [1407533] (in reverse order)
[2026-02-01 08:53:09] 2026-02-01 07:52:38,205 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 08:53:09] 2026-02-01 07:52:38,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 08:53:09] 2026-02-01 07:52:38,207 | INFO     | did not find any defunct processes belonging to 1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:38,208 | INFO     | did not find any defunct processes belonging to 1407533
[2026-02-01 08:53:09] 2026-02-01 07:52:38,208 | INFO     | ready for new job
[2026-02-01 08:53:09] 2026-02-01 07:52:38,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 08:53:09] 2026-02-01 07:52:38,209 | INFO     | **************************************
[2026-02-01 08:53:09] 2026-02-01 07:52:38,209 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 08:53:09] 2026-02-01 07:52:38,209 | INFO     | **************************************
[2026-02-01 08:53:09] 2026-02-01 07:52:38,209 | INFO     | 
[2026-02-01 08:53:09] 2026-02-01 07:52:38,210 | INFO     | architecture information:
[2026-02-01 08:53:09] 2026-02-01 07:52:38,210 | INFO     | executing command: cat /etc/os-release
[2026-02-01 08:53:09] 2026-02-01 07:52:38,224 | INFO     | cat /etc/os-release:
[2026-02-01 08:53:09] NAME="CentOS Linux"
[2026-02-01 08:53:09] VERSION="7 (Core)"
[2026-02-01 08:53:09] ID="centos"
[2026-02-01 08:53:09] ID_LIKE="rhel fedora"
[2026-02-01 08:53:09] VERSION_ID="7"
[2026-02-01 08:53:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 08:53:09] ANSI_COLOR="0;31"
[2026-02-01 08:53:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 08:53:09] HOME_URL="https://www.centos.org/"
[2026-02-01 08:53:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 08:53:09] 
[2026-02-01 08:53:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 08:53:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 08:53:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 08:53:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 08:53:09] 
[2026-02-01 08:53:09] 2026-02-01 07:52:38,224 | INFO     | **************************************
[2026-02-01 08:53:09] 2026-02-01 07:52:38,727 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | INFO     | sufficient remaining disk space (335966896128 B)
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | INFO     | update_server=False
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 08:53:09] 2026-02-01 07:52:38,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 08:53:09] 2026-02-01 07:52:38,745 | INFO     | aborting loop
[2026-02-01 08:53:09] 2026-02-01 07:52:38,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 08:53:09] 2026-02-01 07:52:38,921 | INFO     | all data control threads have been joined
[2026-02-01 08:53:09] 2026-02-01 07:52:38,964 | INFO     | all payload control threads have been joined
[2026-02-01 08:53:09] 2026-02-01 07:52:39,579 | INFO     | all job control threads have been joined
[2026-02-01 08:53:09] 2026-02-01 07:52:39,621 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 08:53:09] 2026-02-01 07:52:39,750 | INFO     | [job] queue monitor thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:39,750 | INFO     | [job] retrieve thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:39,751 | INFO     | [job] job monitor thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:39,820 | INFO     | [payload] failed_post thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:39,924 | INFO     | [data] control thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:39,970 | INFO     | [payload] control thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,410 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,585 | INFO     | [job] control thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,815 | INFO     | [job] validate thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,846 | INFO     | [payload] validate_post thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,897 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:40,993 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:41,134 | INFO     | [data] copytool_in thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:41,627 | INFO     | [data] copytool_out thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:42,752 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:49,437 | INFO     | job.realtimelogging is not enabled
[2026-02-01 08:53:09] 2026-02-01 07:52:50,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 08:53:09] 2026-02-01 07:52:58,083 | INFO     | [monitor] cgroup control has ended
[2026-02-01 08:53:09] 2026-02-01 07:52:58,239 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148252809024)>', '<ExcThread(monitor, started 140147911804672)>']
[2026-02-01 08:53:09] 2026-02-01 07:53:03,265 | INFO     | all workflow threads have been joined
[2026-02-01 08:53:09] 2026-02-01 07:53:03,265 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 08:53:09] 2026-02-01 07:53:03,266 | INFO     | traces error code: 0
[2026-02-01 08:53:09] 2026-02-01 07:53:03,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 08:53:09] 2026-02-01 07:53:09,431 | INFO     | PID=1403029 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 08:53:09] 2026-02-01 07:53:09,431 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 08:53:09] 2026-02-01 07:53:09,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 08:53:09] 2026-02-01 07:53:09,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 08:53:09] 2026-02-01 07:53:09,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 08:53:09] 2026-02-01 07:53:09,432 | INFO     | [monitor] control thread has ended
[2026-02-01 08:53:09] 2026-02-01 07:53:09,507 [wrapper] ==== pilot stdout END ====
[2026-02-01 08:53:09] 2026-02-01 07:53:09,512 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 08:53:09] 2026-02-01 07:53:09,515 [wrapper] pilotpid: 1403029
[2026-02-01 08:53:09] 2026-02-01 07:53:09,519 [wrapper] Pilot exit status: 0
[2026-02-01 08:53:09] 2026-02-01 07:53:09,531 [wrapper] pandaids: 6994861585
[2026-02-01 08:53:09] 2026-02-01 07:53:09,552 [wrapper] cleanup supervisor_pilot 1412985 1403030
[2026-02-01 08:53:09] 2026-02-01 07:53:09,556 [wrapper] Test setup, not cleaning
[2026-02-01 08:53:09] 2026-02-01 07:53:09,560 [wrapper] apfmon messages muted
[2026-02-01 08:53:09] 2026-02-01 07:53:09,564 [wrapper] ==== wrapper stdout END ====
[2026-02-01 08:53:09] 2026-02-01 07:53:09,568 [wrapper] ==== wrapper stderr END ====
[2026-02-01 08:53:09]  *** Error codes and diagnostics ***
[2026-02-01 08:53:09]     "exeErrorCode": 0,
[2026-02-01 08:53:09]     "exeErrorDiag": "",
[2026-02-01 08:53:09]     "pilotErrorCode": 0,
[2026-02-01 08:53:09]     "pilotErrorDiag": "",
[2026-02-01 08:53:09]  *** Listing of results directory ***
[2026-02-01 08:53:09] total 667736
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc      5111 Jan 31 17:25 queuedata.json
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc    584422 Jan 31 17:25 pilot3.tar.gz
[2026-02-01 08:53:09] -rwx------ 1 boinc boinc     36322 Jan 31 17:25 runpilot2-wrapper.sh
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc       100 Feb  1 07:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 08:53:09] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 07:38 run_atlas
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc       105 Feb  1 07:38 job.xml
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc 494352976 Feb  1 07:38 EVNT.48317889._000072.pool.root.1
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc    597758 Feb  1 07:38 input.tar.gz
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc     15845 Feb  1 07:38 start_atlas.sh
[2026-02-01 08:53:09] drwxrwx--x 2 boinc boinc      4096 Feb  1 07:38 shared
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc         0 Feb  1 07:38 boinc_setup_complete
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc      6378 Feb  1 07:38 init_data.xml
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc         0 Feb  1 07:38 boinc_lockfile
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc      2521 Feb  1 07:38 pandaJob.out
[2026-02-01 08:53:09] -rw------- 1 boinc boinc   1010520 Feb  1 07:38 agis_schedconf.cvmfs.json
[2026-02-01 08:53:09] -rw------- 1 boinc boinc   1511668 Feb  1 07:38 agis_ddmendpoints.agis.ALL.json
[2026-02-01 08:53:09] -rw------- 1 boinc boinc       420 Feb  1 07:38 workernode_map.json
[2026-02-01 08:53:09] drwx------ 5 boinc boinc      4096 Feb  1 07:38 pilot3
[2026-02-01 08:53:09] -rw------- 1 boinc boinc        95 Feb  1 08:52 pilot_heartbeat.json
[2026-02-01 08:53:09] -rw------- 1 boinc boinc 183602558 Feb  1 08:52 HITS.48317892._003747.pool.root.1
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc       530 Feb  1 08:52 boinc_task_state.xml
[2026-02-01 08:53:09] -rw------- 1 boinc boinc      1019 Feb  1 08:52 memory_monitor_summary.json
[2026-02-01 08:53:09] -rw------- 1 boinc boinc    279304 Feb  1 08:52 log.48317892._003747.job.log.tgz.1
[2026-02-01 08:53:09] -rw------- 1 boinc boinc      6312 Feb  1 08:52 heartbeat.json
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc      8192 Feb  1 08:52 boinc_mmap_file
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc        27 Feb  1 08:52 wrapper_checkpoint.txt
[2026-02-01 08:53:09] -rw------- 1 boinc boinc       747 Feb  1 08:53 pilotlog.txt
[2026-02-01 08:53:09] -rw------- 1 boinc boinc    654601 Feb  1 08:53 log.48317892._003747.job.log.1
[2026-02-01 08:53:09] -rw------- 1 boinc boinc       357 Feb  1 08:53 output.list
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc       620 Feb  1 08:53 runtime_log
[2026-02-01 08:53:09] -rw------- 1 boinc boinc    952320 Feb  1 08:53 result.tar.gz
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc      8906 Feb  1 08:53 runtime_log.err
[2026-02-01 08:53:09] -rw------- 1 boinc boinc       659 Feb  1 08:53 OVrNDm2xS68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmQNOKDmvDEExn.diag
[2026-02-01 08:53:09] -rw-r--r-- 1 boinc boinc     21572 Feb  1 08:53 stderr.txt
[2026-02-01 08:53:09] HITS file was successfully produced:
[2026-02-01 08:53:09] -rw------- 1 boinc boinc 183602558 Feb  1 08:52 shared/HITS.pool.root.1
[2026-02-01 08:53:09]  *** Contents of shared directory: ***
[2026-02-01 08:53:09] total 663608
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc 494352976 Feb  1 07:38 ATLAS.root_0
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc    597758 Feb  1 07:38 input.tar.gz
[2026-02-01 08:53:09] -rw-r--r-- 2 boinc boinc     15845 Feb  1 07:38 start_atlas.sh
[2026-02-01 08:53:09] -rw------- 1 boinc boinc 183602558 Feb  1 08:52 HITS.pool.root.1
[2026-02-01 08:53:09] -rw------- 1 boinc boinc    952320 Feb  1 08:53 result.tar.gz
08:53:11 (1398914): run_atlas exited; CPU time 16683.419681
08:53:11 (1398914): called boinc_finish(0)

</stderr_txt>
]]>

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