Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:27:09 (19418): wrapper (7.7.26015): starting
17:27:09 (19418): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 17:27:09] Arguments: --nthreads 8
[2026-01-31 17:27:09] Threads: 8
[2026-01-31 17:27:09] Checking for CVMFS
[2026-01-31 17:27:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 17:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 17:27:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 17:27:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 17:27:10] 2.11.2.0 3733 213339 151156 155729 2 50 12665375 18432001 1833 130560 0 142507318 99.981 8101779 29679 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-31 17:27:10] CVMFS is ok
[2026-01-31 17:27:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 17:27:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 17:27:10] Further information can be found at the LHC@home message board.
[2026-01-31 17:27:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 17:27:10] Checking for apptainer binary...
[2026-01-31 17:27:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 17:27:10] Running /usr/bin/apptainer --version
[2026-01-31 17:27:10] apptainer version 1.3.2-1.el7
[2026-01-31 17:27:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 17:27:11] c-206-23.aglt2.org
[2026-01-31 17:27:11] apptainer works
[2026-01-31 17:27:11] Set ATHENA_PROC_NUMBER=8
[2026-01-31 17:27:11] Set ATHENA_CORE_NUMBER=8
[2026-01-31 17:27:11] Starting ATLAS job with PandaID=6994779583
[2026-01-31 17:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 20:43:50]  *** The last 200 lines of the pilot log: ***
[2026-01-31 20:43:50] 2026-02-01 01:42:59,247 | INFO     | monitor loop #858: job 0:6994779583 is in state 'finished'
[2026-01-31 20:43:50] 2026-02-01 01:42:59,248 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,553 | INFO     | job 6994779583 has state=finished
[2026-01-31 20:43:50] 2026-02-01 01:43:00,553 | INFO     | preparing for final server update for job 6994779583 in state='finished'
[2026-01-31 20:43:50] 2026-02-01 01:43:00,553 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6994779583/jobReport.json
[2026-01-31 20:43:50] 2026-02-01 01:43:00,557 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-31 20:43:50] 2026-02-01 01:43:00,557 | INFO     | this job has now completed (state=finished)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,557 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,558 | INFO     | log transfer has been attempted: DONE
[2026-01-31 20:43:50] 2026-02-01 01:43:00,558 | INFO     | job 6994779583 has finished - writing final server update
[2026-01-31 20:43:50] 2026-02-01 01:43:00,558 | INFO     | total number of processed events: 400 (read)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,563 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6994779583/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,564 | INFO     | extracted standard info from prmon json
[2026-01-31 20:43:50] 2026-02-01 01:43:00,564 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 20:43:50] 2026-02-01 01:43:00,564 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 20:43:50] 2026-02-01 01:43:00,565 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 20:43:50] 2026-02-01 01:43:00,565 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 20:43:50] 2026-02-01 01:43:00,570 | INFO     | fitting pss+swap vs Time
[2026-01-31 20:43:50] 2026-02-01 01:43:00,571 | INFO     | sum of square deviations: 2194675568.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,573 | INFO     | sum of deviations: -7947101716.000006
[2026-01-31 20:43:50] 2026-02-01 01:43:00,573 | INFO     | mean x: 1769904282.5
[2026-01-31 20:43:50] 2026-02-01 01:43:00,573 | INFO     | mean y: 2521803.4166666665
[2026-01-31 20:43:50] 2026-02-01 01:43:00,573 | INFO     | intersect: 6411491569.015985
[2026-01-31 20:43:50] 2026-02-01 01:43:00,574 | INFO     | chi2: 1.6227458515674447
[2026-01-31 20:43:50] 2026-02-01 01:43:00,574 | INFO     | sum of square deviations: 2027639878.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,576 | INFO     | sum of deviations: -7458493912.000006
[2026-01-31 20:43:50] 2026-02-01 01:43:00,576 | INFO     | mean x: 1769904130.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,576 | INFO     | mean y: 2522249.5989304814
[2026-01-31 20:43:50] 2026-02-01 01:43:00,576 | INFO     | intersect: 6512958013.690105
[2026-01-31 20:43:50] 2026-02-01 01:43:00,577 | INFO     | chi2: 1.6224771722540325
[2026-01-31 20:43:50] 2026-02-01 01:43:00,577 | INFO     | current chi2=1.6224771722540325 (change=0.01655707904923007 %)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,577 | INFO     | right removable region: 186
[2026-01-31 20:43:50] 2026-02-01 01:43:00,578 | INFO     | sum of square deviations: 2027639878.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,579 | INFO     | sum of deviations: -35881879208.00001
[2026-01-31 20:43:50] 2026-02-01 01:43:00,579 | INFO     | mean x: 1769904435.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,580 | INFO     | mean y: 2546994.7754010693
[2026-01-31 20:43:50] 2026-02-01 01:43:00,580 | INFO     | intersect: 31323442699.89208
[2026-01-31 20:43:50] 2026-02-01 01:43:00,580 | INFO     | chi2: 0.22425797580445056
[2026-01-31 20:43:50] 2026-02-01 01:43:00,580 | INFO     | current chi2=0.22425797580445056 (change=86.18033898605657 %)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,581 | INFO     | sum of square deviations: 1869302025.5
[2026-01-31 20:43:50] 2026-02-01 01:43:00,582 | INFO     | sum of deviations: -39680028927.50001
[2026-01-31 20:43:50] 2026-02-01 01:43:00,582 | INFO     | mean x: 1769904587.5
[2026-01-31 20:43:50] 2026-02-01 01:43:00,583 | INFO     | mean y: 2550652.368131868
[2026-01-31 20:43:50] 2026-02-01 01:43:00,583 | INFO     | intersect: 37572651295.75128
[2026-01-31 20:43:50] 2026-02-01 01:43:00,583 | INFO     | chi2: 0.1807676228287768
[2026-01-31 20:43:50] 2026-02-01 01:43:00,583 | INFO     | current chi2=0.1807676228287768 (change=19.39300166233403 %)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,584 | INFO     | left removable region: 20
[2026-01-31 20:43:50] 2026-02-01 01:43:00,584 | INFO     | sum of square deviations: 1418361477.5
[2026-01-31 20:43:50] 2026-02-01 01:43:00,585 | INFO     | sum of deviations: -28624992187.0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,585 | INFO     | mean x: 1769904709.5
[2026-01-31 20:43:50] 2026-02-01 01:43:00,586 | INFO     | mean y: 2541461.2289156625
[2026-01-31 20:43:50] 2026-02-01 01:43:00,586 | INFO     | intersect: 35722285183.027794
[2026-01-31 20:43:50] 2026-02-01 01:43:00,586 | INFO     | chi2: 0.16810508650502795
[2026-01-31 20:43:50] 2026-02-01 01:43:00,587 | INFO     | current memory leak: -20.18 B/s (using 166 data points, chi2=0.17)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,587 | INFO     | could have reported an average CPU frequency of 2428 MHz (10 samples)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,587 | INFO     | ..............................
[2026-01-31 20:43:50] 2026-02-01 01:43:00,587 | INFO     | . Timing measurements:
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . get job = 0 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . initial setup = 6 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . payload setup = 4 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . stage-in = 0 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . payload execution = 11715 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,588 | INFO     | . stage-out = 2 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,589 | INFO     | . log creation = 0 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,589 | INFO     | ..............................
[2026-01-31 20:43:50] 2026-02-01 01:43:00,713 | INFO     | 
[2026-01-31 20:43:50] 2026-02-01 01:43:00,713 | INFO     | job summary report
[2026-01-31 20:43:50] 2026-02-01 01:43:00,713 | INFO     | --------------------------------------------------
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | PanDA job id: 6994779583
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | task id: 48317872
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | errors: (none)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | pilot state: finished 
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | transexitcode: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | exeerrorcode: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | exeerrordiag: 
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | exitcode: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,714 | INFO     | exitmsg: OK
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | cpuconsumptiontime: 86271 s
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | nevents: 400
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | neventsw: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | pid: 27812
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | pgrp: 27812
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | corecount: 8
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | event service: False
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | sizes: {0: 2278211, 1: 2278299, 11724: 2307792, 11728: 2316790, 11731: 2316846, 11733: 2317040}
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | --------------------------------------------------
[2026-01-31 20:43:50] 2026-02-01 01:43:00,715 | INFO     | 
[2026-01-31 20:43:50] 2026-02-01 01:43:00,716 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-31 20:43:50] 2026-02-01 01:43:00,726 | INFO     | time since job start (11734s) is within the limit (349056.0s)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | job 6994779583 has completed (purged errors)
[2026-01-31 20:43:50] 2026-02-01 01:43:00,730 | INFO     | overall cleanup function is called
[2026-01-31 20:43:50] 2026-02-01 01:43:01,737 | INFO     | --- collectZombieJob: --- 10, [27812]
[2026-01-31 20:43:50] 2026-02-01 01:43:01,738 | INFO     | zombie collector waiting for pid 27812
[2026-01-31 20:43:50] 2026-02-01 01:43:01,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 20:43:50] 2026-02-01 01:43:01,738 | INFO     | collected zombie processes
[2026-01-31 20:43:50] 2026-02-01 01:43:01,738 | INFO     | will attempt to kill all subprocesses of pid=27812
[2026-01-31 20:43:50] 2026-02-01 01:43:01,888 | INFO     | process IDs to be killed: [27812] (in reverse order)
[2026-01-31 20:43:50] 2026-02-01 01:43:01,939 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 20:43:50] 2026-02-01 01:43:01,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 20:43:50] 2026-02-01 01:43:01,942 | INFO     | did not find any defunct processes belonging to 27812
[2026-01-31 20:43:50] 2026-02-01 01:43:01,945 | INFO     | did not find any defunct processes belonging to 27812
[2026-01-31 20:43:50] 2026-02-01 01:43:01,945 | INFO     | ready for new job
[2026-01-31 20:43:50] 2026-02-01 01:43:01,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 20:43:50] 2026-02-01 01:43:01,947 | INFO     | **************************************
[2026-01-31 20:43:50] 2026-02-01 01:43:01,947 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 20:43:50] 2026-02-01 01:43:01,947 | INFO     | **************************************
[2026-01-31 20:43:50] 2026-02-01 01:43:01,947 | INFO     | 
[2026-01-31 20:43:50] 2026-02-01 01:43:01,948 | INFO     | architecture information:
[2026-01-31 20:43:50] 2026-02-01 01:43:01,948 | INFO     | executing command: cat /etc/os-release
[2026-01-31 20:43:50] 2026-02-01 01:43:01,962 | INFO     | cat /etc/os-release:
[2026-01-31 20:43:50] NAME="CentOS Linux"
[2026-01-31 20:43:50] VERSION="7 (Core)"
[2026-01-31 20:43:50] ID="centos"
[2026-01-31 20:43:50] ID_LIKE="rhel fedora"
[2026-01-31 20:43:50] VERSION_ID="7"
[2026-01-31 20:43:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 20:43:50] ANSI_COLOR="0;31"
[2026-01-31 20:43:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 20:43:50] HOME_URL="https://www.centos.org/"
[2026-01-31 20:43:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 20:43:50] 
[2026-01-31 20:43:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 20:43:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 20:43:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 20:43:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 20:43:50] 
[2026-01-31 20:43:50] 2026-02-01 01:43:01,962 | INFO     | **************************************
[2026-01-31 20:43:50] 2026-02-01 01:43:02,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-31 20:43:50] 2026-02-01 01:43:02,479 | INFO     | sufficient remaining disk space (26531069952 B)
[2026-01-31 20:43:50] 2026-02-01 01:43:02,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 20:43:50] 2026-02-01 01:43:02,480 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 20:43:50] 2026-02-01 01:43:02,480 | INFO     | update_server=False
[2026-01-31 20:43:50] 2026-02-01 01:43:02,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 20:43:50] 2026-02-01 01:43:02,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 20:43:50] 2026-02-01 01:43:02,482 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-31 20:43:50] 2026-02-01 01:43:02,482 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 20:43:50] 2026-02-01 01:43:02,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 20:43:50] 2026-02-01 01:43:02,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 20:43:50] 2026-02-01 01:43:02,756 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 20:43:50] 2026-02-01 01:43:02,756 | INFO     | aborting loop
[2026-01-31 20:43:50] 2026-02-01 01:43:02,781 | INFO     | all data control threads have been joined
[2026-01-31 20:43:50] 2026-02-01 01:43:03,167 | INFO     | all job control threads have been joined
[2026-01-31 20:43:50] 2026-02-01 01:43:03,486 | INFO     | [job] retrieve thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,487 | INFO     | [job] queue monitor thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,542 | INFO     | [payload] failed_post thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,605 | INFO     | [job] validate thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,618 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,657 | INFO     | all payload control threads have been joined
[2026-01-31 20:43:50] 2026-02-01 01:43:03,762 | INFO     | [job] job monitor thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,787 | INFO     | [data] control thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,787 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:03,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 20:43:50] 2026-02-01 01:43:03,917 | INFO     | [data] copytool_in thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:04,171 | INFO     | [job] control thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:04,313 | INFO     | [payload] validate_post thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:04,550 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:04,663 | INFO     | [payload] control thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:04,927 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:05,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 20:43:50] 2026-02-01 01:43:05,821 | INFO     | [data] copytool_out thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:09,189 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 20:43:50] 2026-02-01 01:43:44,865 | INFO     | [monitor] cgroup control has ended
[2026-01-31 20:43:50] 2026-02-01 01:43:45,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140186892810048)>', '<ExcThread(monitor, started 140186306467584)>']
[2026-01-31 20:43:50] 2026-02-01 01:43:45,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 20:43:50] 2026-02-01 01:43:45,707 | INFO     | [monitor] control thread has ended
[2026-01-31 20:43:50] 2026-02-01 01:43:50,063 | INFO     | all workflow threads have been joined
[2026-01-31 20:43:50] 2026-02-01 01:43:50,064 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 20:43:50] 2026-02-01 01:43:50,064 | INFO     | traces error code: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:50,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 20:43:50] 2026-02-01 01:43:50,202 [wrapper] ==== pilot stdout END ====
[2026-01-31 20:43:50] 2026-02-01 01:43:50,204 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 20:43:50] 2026-02-01 01:43:50,206 [wrapper] pilotpid: 23401
[2026-01-31 20:43:50] 2026-02-01 01:43:50,208 [wrapper] Pilot exit status: 0
[2026-01-31 20:43:50] 2026-02-01 01:43:50,218 [wrapper] pandaids: 6994779583
[2026-01-31 20:43:50] 2026-02-01 01:43:50,262 [wrapper] cleanup supervisor_pilot  9886 23402
[2026-01-31 20:43:50] 2026-02-01 01:43:50,264 [wrapper] Test setup, not cleaning
[2026-01-31 20:43:50] 2026-02-01 01:43:50,266 [wrapper] apfmon messages muted
[2026-01-31 20:43:50] 2026-02-01 01:43:50,269 [wrapper] ==== wrapper stdout END ====
[2026-01-31 20:43:50] 2026-02-01 01:43:50,271 [wrapper] ==== wrapper stderr END ====
[2026-01-31 20:43:50]  *** Error codes and diagnostics ***
[2026-01-31 20:43:50]     "exeErrorCode": 0,
[2026-01-31 20:43:50]     "exeErrorDiag": "",
[2026-01-31 20:43:50]     "pilotErrorCode": 0,
[2026-01-31 20:43:50]     "pilotErrorDiag": "",
[2026-01-31 20:43:50]  *** Listing of results directory ***
[2026-01-31 20:43:50] total 681620
[2026-01-31 20:43:50] -rwx------ 1 boincer umatlas     36322 Jan 31 11:04 runpilot2-wrapper.sh
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas    584422 Jan 31 11:04 pilot3.tar.gz
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas      5111 Jan 31 11:05 queuedata.json
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas       100 Jan 31 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 20:43:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 31 17:27 run_atlas
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas       105 Jan 31 17:27 job.xml
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas 501943316 Jan 31 17:27 EVNT.48317869._000287.pool.root.1
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 17:27 start_atlas.sh
[2026-01-31 20:43:50] drwxrwx--x 2 boincer umatlas      4096 Jan 31 17:27 shared
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas    597753 Jan 31 17:27 input.tar.gz
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas         0 Jan 31 17:27 boinc_lockfile
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas      2519 Jan 31 17:27 pandaJob.out
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas        57 Jan 31 17:27 setup.sh.local
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas   1010520 Jan 31 17:27 agis_schedconf.cvmfs.json
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas       433 Jan 31 17:27 workernode_map.json
[2026-01-31 20:43:50] drwx------ 5 boincer umatlas      4096 Jan 31 17:27 pilot3
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas      5952 Jan 31 20:37 init_data.xml
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas 187846879 Jan 31 20:42 HITS.48317872._015780.pool.root.1
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas        95 Jan 31 20:42 pilot_heartbeat.json
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas       531 Jan 31 20:42 boinc_task_state.xml
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas      1054 Jan 31 20:42 memory_monitor_summary.json
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas   1511668 Jan 31 20:42 agis_ddmendpoints.agis.ALL.json
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas    466733 Jan 31 20:42 log.48317872._015780.job.log.tgz.1
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas      6421 Jan 31 20:43 heartbeat.json
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas        28 Jan 31 20:43 wrapper_checkpoint.txt
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 31 20:43 boinc_mmap_file
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas      4548 Jan 31 20:43 pilotlog.txt
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas   1651385 Jan 31 20:43 log.48317872._015780.job.log.1
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas       357 Jan 31 20:43 output.list
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas       620 Jan 31 20:43 runtime_log
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas   2140160 Jan 31 20:43 result.tar.gz
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas       661 Jan 31 20:43 s3LODmcdS68n9Rq4apOajLDm4fhM0noT9bVooX4SDmQuNKDmjUJgkn.diag
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas      9342 Jan 31 20:43 runtime_log.err
[2026-01-31 20:43:50] -rw-r--r-- 1 boincer umatlas     21194 Jan 31 20:43 stderr.txt
[2026-01-31 20:43:50] HITS file was successfully produced:
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas 187846879 Jan 31 20:42 shared/HITS.pool.root.1
[2026-01-31 20:43:50]  *** Contents of shared directory: ***
[2026-01-31 20:43:50] total 676328
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas 501943316 Jan 31 17:27 ATLAS.root_0
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 17:27 start_atlas.sh
[2026-01-31 20:43:50] -rw-r--r-- 2 boincer umatlas    597753 Jan 31 17:27 input.tar.gz
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas 187846879 Jan 31 20:42 HITS.pool.root.1
[2026-01-31 20:43:50] -rw------- 1 boincer umatlas   2140160 Jan 31 20:43 result.tar.gz
20:43:51 (19418): run_atlas exited; CPU time 86423.004283
20:43:51 (19418): called boinc_finish(0)

</stderr_txt>
]]>

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