Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:34:57 (965058): wrapper (7.7.26015): starting
01:34:57 (965058): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 01:34:57] Arguments: --nthreads 4
[2026-02-01 01:34:57] Threads: 4
[2026-02-01 01:34:57] Checking for CVMFS
[2026-02-01 01:34:57] No cvmfs_config command found, will try listing directly
[2026-02-01 01:34:57] CVMFS is ok
[2026-02-01 01:34:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 01:34:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 01:34:57] Further information can be found at the LHC@home message board.
[2026-02-01 01:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 01:34:57] Checking for apptainer binary...
[2026-02-01 01:34:57] which: no apptainer in ((null))
[2026-02-01 01:34:57] apptainer is not installed, using version from CVMFS
[2026-02-01 01:34:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 01:34:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-02-01 01:34:57] apptainer works
[2026-02-01 01:34:57] Set ATHENA_PROC_NUMBER=4
[2026-02-01 01:34:57] Set ATHENA_CORE_NUMBER=4
[2026-02-01 01:34:57] Starting ATLAS job with PandaID=6994938794
[2026-02-01 01:34:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 04:42:34]  *** The last 200 lines of the pilot log: ***
[2026-02-01 04:42:34] 2026-02-01 03:41:34,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 04:42:34] 2026-02-01 03:41:34,151 | INFO     | fitting pss+swap vs Time
[2026-02-01 04:42:34] 2026-02-01 03:41:34,151 | INFO     | sum of square deviations: 1900284932.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,152 | INFO     | sum of deviations: 13340052729.000004
[2026-02-01 04:42:34] 2026-02-01 03:41:34,152 | INFO     | mean x: 1769911683.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,152 | INFO     | mean y: 2320194.612021858
[2026-02-01 04:42:34] 2026-02-01 03:41:34,153 | INFO     | intersect: -12422508724.09307
[2026-02-01 04:42:34] 2026-02-01 03:41:34,153 | INFO     | chi2: 1.34700216488464
[2026-02-01 04:42:34] 2026-02-01 03:41:34,153 | INFO     | sum of square deviations: 1748737904.5
[2026-02-01 04:42:34] 2026-02-01 03:41:34,154 | INFO     | sum of deviations: 12958118278.500006
[2026-02-01 04:42:34] 2026-02-01 03:41:34,154 | INFO     | mean x: 1769911530.5
[2026-02-01 04:42:34] 2026-02-01 03:41:34,154 | INFO     | mean y: 2319809.9831460672
[2026-02-01 04:42:34] 2026-02-01 03:41:34,155 | INFO     | intersect: -13112694678.85615
[2026-02-01 04:42:34] 2026-02-01 03:41:34,155 | INFO     | chi2: 1.3479600577036663
[2026-02-01 04:42:34] 2026-02-01 03:41:34,155 | INFO     | current chi2=1.3479600577036663 (change=-0.07111293834545533 %)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,155 | INFO     | right removable region: 177
[2026-02-01 04:42:34] 2026-02-01 03:41:34,155 | INFO     | sum of square deviations: 1748737904.5
[2026-02-01 04:42:34] 2026-02-01 03:41:34,156 | INFO     | sum of deviations: -9919703886.500002
[2026-02-01 04:42:34] 2026-02-01 03:41:34,156 | INFO     | mean x: 1769911835.5
[2026-02-01 04:42:34] 2026-02-01 03:41:34,157 | INFO     | mean y: 2343276.0393258426
[2026-02-01 04:42:34] 2026-02-01 03:41:34,157 | INFO     | intersect: 10042156142.331377
[2026-02-01 04:42:34] 2026-02-01 03:41:34,157 | INFO     | chi2: 0.027192359989652394
[2026-02-01 04:42:34] 2026-02-01 03:41:34,157 | INFO     | current chi2=0.027192359989652394 (change=97.98126827866078 %)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,157 | INFO     | sum of square deviations: 1605470102.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,158 | INFO     | sum of deviations: -9728386871.999998
[2026-02-01 04:42:34] 2026-02-01 03:41:34,158 | INFO     | mean x: 1769911988.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,158 | INFO     | mean y: 2343050.485549133
[2026-02-01 04:42:34] 2026-02-01 03:41:34,159 | INFO     | intersect: 10727169708.54973
[2026-02-01 04:42:34] 2026-02-01 03:41:34,159 | INFO     | chi2: 0.023621383133547752
[2026-02-01 04:42:34] 2026-02-01 03:41:34,159 | INFO     | current chi2=0.023621383133547752 (change=13.132280013443182 %)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,159 | INFO     | left removable region: 20
[2026-02-01 04:42:34] 2026-02-01 03:41:34,159 | INFO     | sum of square deviations: 1199940638.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,160 | INFO     | sum of deviations: -6156135127.999998
[2026-02-01 04:42:34] 2026-02-01 03:41:34,160 | INFO     | mean x: 1769912110.0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,161 | INFO     | mean y: 2339210.331210191
[2026-02-01 04:42:34] 2026-02-01 03:41:34,161 | INFO     | intersect: 9082636825.723412
[2026-02-01 04:42:34] 2026-02-01 03:41:34,161 | INFO     | chi2: 0.020269048387280227
[2026-02-01 04:42:34] 2026-02-01 03:41:34,161 | INFO     | current memory leak: -5.13 B/s (using 157 data points, chi2=0.02)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | could have reported an average CPU frequency of 2787 MHz (10 samples)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | ..............................
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | . Timing measurements:
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | . get job = 0 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | . initial setup = 5 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | . payload setup = 5 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,162 | INFO     | . stage-in = 0 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,163 | INFO     | . payload execution = 11159 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,163 | INFO     | . stage-out = 1 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,163 | INFO     | . log creation = 0 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,163 | INFO     | ..............................
[2026-02-01 04:42:34] 2026-02-01 03:41:34,255 | INFO     | 
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | job summary report
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | --------------------------------------------------
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | PanDA job id: 6994938794
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | task id: 48317892
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | errors: (none)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | pilot state: finished 
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | transexitcode: 0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | exeerrorcode: 0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | exeerrordiag: 
[2026-02-01 04:42:34] 2026-02-01 03:41:34,256 | INFO     | exitcode: 0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | exitmsg: OK
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | cpuconsumptiontime: 42863 s
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | nevents: 400
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | neventsw: 0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | pid: 995992
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | pgrp: 995992
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | corecount: 4
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | event service: False
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | sizes: {0: 2278230, 11: 2278230, 11165: 2307499, 11167: 2316519, 11170: 2316575, 11171: 2316769}
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | --------------------------------------------------
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | 
[2026-02-01 04:42:34] 2026-02-01 03:41:34,257 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,279 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,279 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 04:42:34] 2026-02-01 03:41:34,281 | INFO     | job 6994938794 has completed (purged errors)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,282 | INFO     | overall cleanup function is called
[2026-02-01 04:42:34] 2026-02-01 03:41:34,368 | INFO     | PID=969201 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 04:42:34] 2026-02-01 03:41:34,368 | INFO     | .. there are 6 such processes running
[2026-02-01 04:42:34] 2026-02-01 03:41:34,435 | WARNING  | process 995992 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 04:42:34] 2026-02-01 03:41:34,711 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,712 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,713 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-01 04:42:34] 2026-02-01 03:41:34,713 | WARNING  | maxPSS not found in memory monitor output
[2026-02-01 04:42:34] 2026-02-01 03:41:34,713 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6994938794/payload.stdout) since it has not been created yet
[2026-02-01 04:42:34] 2026-02-01 03:41:34,713 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-02-01 04:42:34] 2026-02-01 03:41:34,729 | INFO     | sufficient remaining disk space (672429768704 B)
[2026-02-01 04:42:34] 2026-02-01 03:41:34,730 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-01 04:42:34] 2026-02-01 03:41:34,730 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6994938794/HITS.48317892._005189.pool.root.1 since it does not exist
[2026-02-01 04:42:34] 2026-02-01 03:41:35,072 | INFO     | number of running child processes to parent process 995992: 1
[2026-02-01 04:42:34] 2026-02-01 03:41:35,072 | INFO     | maximum number of monitored processes: 6
[2026-02-01 04:42:34] 2026-02-01 03:41:35,073 | INFO     | aborting job monitoring since job object (job id=6994938794) has expired
[2026-02-01 04:42:34] 2026-02-01 03:41:35,288 | INFO     | --- collectZombieJob: --- 10, [995992]
[2026-02-01 04:42:34] 2026-02-01 03:41:35,288 | INFO     | zombie collector waiting for pid 995992
[2026-02-01 04:42:34] 2026-02-01 03:41:35,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 04:42:34] 2026-02-01 03:41:35,288 | INFO     | collected zombie processes
[2026-02-01 04:42:34] 2026-02-01 03:41:35,288 | INFO     | will attempt to kill all subprocesses of pid=995992
[2026-02-01 04:42:34] 2026-02-01 03:41:35,622 | INFO     | process IDs to be killed: [995992] (in reverse order)
[2026-02-01 04:42:34] 2026-02-01 03:41:35,730 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 04:42:34] 2026-02-01 03:41:35,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 04:42:34] 2026-02-01 03:41:35,743 | INFO     | did not find any defunct processes belonging to 995992
[2026-02-01 04:42:34] 2026-02-01 03:41:35,754 | INFO     | did not find any defunct processes belonging to 995992
[2026-02-01 04:42:34] 2026-02-01 03:41:35,754 | INFO     | ready for new job
[2026-02-01 04:42:34] 2026-02-01 03:41:35,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 04:42:34] 2026-02-01 03:41:35,757 | INFO     | **************************************
[2026-02-01 04:42:34] 2026-02-01 03:41:35,757 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 04:42:34] 2026-02-01 03:41:35,757 | INFO     | **************************************
[2026-02-01 04:42:34] 2026-02-01 03:41:35,757 | INFO     | 
[2026-02-01 04:42:34] 2026-02-01 03:41:35,761 | INFO     | architecture information:
[2026-02-01 04:42:34] 2026-02-01 03:41:35,761 | INFO     | executing command: cat /etc/os-release
[2026-02-01 04:42:34] 2026-02-01 03:41:35,778 | INFO     | cat /etc/os-release:
[2026-02-01 04:42:34] NAME="CentOS Linux"
[2026-02-01 04:42:34] VERSION="7 (Core)"
[2026-02-01 04:42:34] ID="centos"
[2026-02-01 04:42:34] ID_LIKE="rhel fedora"
[2026-02-01 04:42:34] VERSION_ID="7"
[2026-02-01 04:42:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 04:42:34] ANSI_COLOR="0;31"
[2026-02-01 04:42:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 04:42:34] HOME_URL="https://www.centos.org/"
[2026-02-01 04:42:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 04:42:34] 
[2026-02-01 04:42:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 04:42:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 04:42:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 04:42:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 04:42:34] 
[2026-02-01 04:42:34] 2026-02-01 03:41:35,778 | INFO     | **************************************
[2026-02-01 04:42:34] 2026-02-01 03:41:36,281 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-02-01 04:42:34] 2026-02-01 03:41:36,297 | INFO     | sufficient remaining disk space (672430817280 B)
[2026-02-01 04:42:34] 2026-02-01 03:41:36,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 04:42:34] 2026-02-01 03:41:36,298 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 04:42:34] 2026-02-01 03:41:36,298 | INFO     | update_server=False
[2026-02-01 04:42:34] 2026-02-01 03:41:36,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 04:42:34] 2026-02-01 03:41:36,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 04:42:34] 2026-02-01 03:41:36,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 04:42:34] 2026-02-01 03:41:36,299 | INFO     | aborting loop
[2026-02-01 04:42:34] 2026-02-01 03:41:36,609 | INFO     | all data control threads have been joined
[2026-02-01 04:42:34] 2026-02-01 03:41:36,719 | INFO     | all payload control threads have been joined
[2026-02-01 04:42:34] 2026-02-01 03:41:36,907 | INFO     | all job control threads have been joined
[2026-02-01 04:42:34] 2026-02-01 03:41:37,300 | INFO     | [job] retrieve thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,305 | INFO     | [job] job monitor thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,394 | INFO     | [payload] failed_post thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,576 | INFO     | [job] validate thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,615 | INFO     | [data] control thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,724 | INFO     | [payload] control thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,912 | INFO     | [job] control thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,936 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,948 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:37,957 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:38,305 | INFO     | [data] copytool_out thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:38,325 | INFO     | [data] copytool_in thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:38,692 | INFO     | [payload] validate_post thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:38,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 04:42:34] 2026-02-01 03:41:39,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 04:42:34] 2026-02-01 03:41:40,266 | INFO     | [job] queue monitor thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:42,751 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:41:47,246 | INFO     | job.realtimelogging is not enabled
[2026-02-01 04:42:34] 2026-02-01 03:41:48,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 04:42:34] 2026-02-01 03:42:06,911 | INFO     | PID=969201 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 04:42:34] 2026-02-01 03:42:06,912 | INFO     | .. there are 6 such processes running
[2026-02-01 04:42:34] 2026-02-01 03:42:06,912 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 04:42:34] 2026-02-01 03:42:06,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 04:42:34] 2026-02-01 03:42:06,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 04:42:34] 2026-02-01 03:42:28,805 | INFO     | [monitor] cgroup control has ended
[2026-02-01 04:42:34] 2026-02-01 03:42:29,212 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22575429900096)>', '<ExcThread(monitor, started 22575190386432)>']
[2026-02-01 04:42:34] 2026-02-01 03:42:30,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 04:42:34] 2026-02-01 03:42:30,025 | INFO     | [monitor] control thread has ended
[2026-02-01 04:42:34] 2026-02-01 03:42:34,237 | INFO     | all workflow threads have been joined
[2026-02-01 04:42:34] 2026-02-01 03:42:34,238 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 04:42:34] 2026-02-01 03:42:34,238 | INFO     | traces error code: 0
[2026-02-01 04:42:34] 2026-02-01 03:42:34,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 04:42:34] 2026-02-01 03:42:34,408 [wrapper] ==== pilot stdout END ====
[2026-02-01 04:42:34] 2026-02-01 03:42:34,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 04:42:34] 2026-02-01 03:42:34,414 [wrapper] pilotpid: 969201
[2026-02-01 04:42:34] 2026-02-01 03:42:34,416 [wrapper] Pilot exit status: 0
[2026-02-01 04:42:34] 2026-02-01 03:42:34,427 [wrapper] pandaids: 6994938794
[2026-02-01 04:42:34] 2026-02-01 03:42:34,502 [wrapper] cleanup supervisor_pilot 1117845 969202
[2026-02-01 04:42:34] 2026-02-01 03:42:34,505 [wrapper] Test setup, not cleaning
[2026-02-01 04:42:34] 2026-02-01 03:42:34,508 [wrapper] apfmon messages muted
[2026-02-01 04:42:34] 2026-02-01 03:42:34,511 [wrapper] ==== wrapper stdout END ====
[2026-02-01 04:42:34] 2026-02-01 03:42:34,514 [wrapper] ==== wrapper stderr END ====
[2026-02-01 04:42:34]  *** Error codes and diagnostics ***
[2026-02-01 04:42:34]     "exeErrorCode": 0,
[2026-02-01 04:42:34]     "exeErrorDiag": "",
[2026-02-01 04:42:34]     "pilotErrorCode": 0,
[2026-02-01 04:42:34]     "pilotErrorDiag": "",
[2026-02-01 04:42:34]  *** Listing of results directory ***
[2026-02-01 04:42:34] total 669996
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc      5111 Jan 31 22:17 queuedata.json
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc    584422 Jan 31 22:17 pilot3.tar.gz
[2026-02-01 04:42:34] -rwx------ 1 boinc boinc     36322 Jan 31 22:17 runpilot2-wrapper.sh
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc       100 Feb  1 01:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 04:42:34] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 01:34 run_atlas
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc       105 Feb  1 01:34 job.xml
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc      6635 Feb  1 01:34 init_data.xml
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc 490105982 Feb  1 01:34 EVNT.48317889._000101.pool.root.1
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc     15845 Feb  1 01:34 start_atlas.sh
[2026-02-01 04:42:34] drwxrwx--x 2 boinc boinc      4096 Feb  1 01:34 shared
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc    597757 Feb  1 01:34 input.tar.gz
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc         0 Feb  1 01:34 boinc_lockfile
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc      2520 Feb  1 01:34 pandaJob.out
[2026-02-01 04:42:34] -rw------- 1 boinc boinc   1010520 Feb  1 01:35 agis_schedconf.cvmfs.json
[2026-02-01 04:42:34] -rw------- 1 boinc boinc       452 Feb  1 01:35 workernode_map.json
[2026-02-01 04:42:34] drwx------ 5 boinc boinc      4096 Feb  1 01:35 pilot3
[2026-02-01 04:42:34] -rw------- 1 boinc boinc 188108139 Feb  1 04:40 HITS.48317892._005189.pool.root.1
[2026-02-01 04:42:34] -rw------- 1 boinc boinc        95 Feb  1 04:41 pilot_heartbeat.json
[2026-02-01 04:42:34] -rw------- 1 boinc boinc      1033 Feb  1 04:41 memory_monitor_summary.json
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc       528 Feb  1 04:41 boinc_task_state.xml
[2026-02-01 04:42:34] -rw------- 1 boinc boinc   1511668 Feb  1 04:41 agis_ddmendpoints.agis.ALL.json
[2026-02-01 04:42:34] -rw------- 1 boinc boinc    372057 Feb  1 04:41 log.48317892._005189.job.log.tgz.1
[2026-02-01 04:42:34] -rw------- 1 boinc boinc      6402 Feb  1 04:41 heartbeat.json
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc      8192 Feb  1 04:42 boinc_mmap_file
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc        26 Feb  1 04:42 wrapper_checkpoint.txt
[2026-02-01 04:42:34] -rw------- 1 boinc boinc      4900 Feb  1 04:42 pilotlog.txt
[2026-02-01 04:42:34] -rw------- 1 boinc boinc   1589855 Feb  1 04:42 log.48317892._005189.job.log.1
[2026-02-01 04:42:34] -rw------- 1 boinc boinc       357 Feb  1 04:42 output.list
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc       620 Feb  1 04:42 runtime_log
[2026-02-01 04:42:34] -rw------- 1 boinc boinc   1976320 Feb  1 04:42 result.tar.gz
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc      9205 Feb  1 04:42 runtime_log.err
[2026-02-01 04:42:34] -rw------- 1 boinc boinc       664 Feb  1 04:42 UZLLDmeWX68n9Rq4apOajLDm4fhM0noT9bVooX4SDmaKOKDm0HyOFm.diag
[2026-02-01 04:42:34] -rw-r--r-- 1 boinc boinc     21398 Feb  1 04:42 stderr.txt
[2026-02-01 04:42:34] HITS file was successfully produced:
[2026-02-01 04:42:34] -rw------- 1 boinc boinc 188108139 Feb  1 04:40 shared/HITS.pool.root.1
[2026-02-01 04:42:34]  *** Contents of shared directory: ***
[2026-02-01 04:42:34] total 664860
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc 490105982 Feb  1 01:34 ATLAS.root_0
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc     15845 Feb  1 01:34 start_atlas.sh
[2026-02-01 04:42:34] -rw-r--r-- 2 boinc boinc    597757 Feb  1 01:34 input.tar.gz
[2026-02-01 04:42:34] -rw------- 1 boinc boinc 188108139 Feb  1 04:40 HITS.pool.root.1
[2026-02-01 04:42:34] -rw------- 1 boinc boinc   1976320 Feb  1 04:42 result.tar.gz
04:42:35 (965058): run_atlas exited; CPU time 43342.396333
04:42:35 (965058): called boinc_finish(0)

</stderr_txt>
]]>

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