Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:00:45 (1892530): wrapper (7.7.26015): starting
20:00:45 (1892530): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 20:00:45] Arguments: --nthreads 3
[2026-02-01 20:00:45] Threads: 3
[2026-02-01 20:00:45] Checking for CVMFS
[2026-02-01 20:01:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 20:01:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 20:01:38] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 20:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 20:01:39] 2.13.3.0 1892761 0 29452 155747 3 1 16018832 31457281 0 130560 0 0 0.000 1338 53 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-01 20:01:39] CVMFS is ok
[2026-02-01 20:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 20:01:39] Checking for apptainer binary...
[2026-02-01 20:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 20:01:39] Running /usr/bin/apptainer --version
[2026-02-01 20:01:39] apptainer version 1.4.5-2.el9
[2026-02-01 20:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 20:01:39] testio001
[2026-02-01 20:01:39] apptainer works
[2026-02-01 20:01:39] Set ATHENA_PROC_NUMBER=3
[2026-02-01 20:01:39] Set ATHENA_CORE_NUMBER=3
[2026-02-01 20:01:40] Starting ATLAS job with PandaID=6991036796
[2026-02-01 20:01:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 23:55:56]  *** The last 200 lines of the pilot log: ***
[2026-02-01 23:55:56] 2026-02-01 14:54:59,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,382 | INFO     | log transfer has been attempted: DONE
[2026-02-01 23:55:56] 2026-02-01 14:54:59,382 | INFO     | job 6991036796 has finished - writing final server update
[2026-02-01 23:55:56] 2026-02-01 14:54:59,382 | INFO     | total number of processed events: 400 (read)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,383 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6991036796/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,383 | INFO     | extracted standard info from prmon json
[2026-02-01 23:55:56] 2026-02-01 14:54:59,383 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 23:55:56] 2026-02-01 14:54:59,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 23:55:56] 2026-02-01 14:54:59,384 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 23:55:56] 2026-02-01 14:54:59,384 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 23:55:56] 2026-02-01 14:54:59,385 | INFO     | fitting pss+swap vs Time
[2026-02-01 23:55:56] 2026-02-01 14:54:59,385 | INFO     | sum of square deviations: 3675130936.960519
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | sum of deviations: 20011532092.61843
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | mean x: 1769950748.5131578
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | mean y: 2329499.293859649
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | intersect: -9635266225.53176
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | chi2: 2.2943319137049536
[2026-02-01 23:55:56] 2026-02-01 14:54:59,386 | INFO     | sum of square deviations: 3438606486.959646
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | sum of deviations: 32546127793.09419
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | mean x: 1769950596.013453
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | mean y: 2337430.9686098653
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | intersect: -16750099494.796165
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | chi2: 1.640556588016311
[2026-02-01 23:55:56] 2026-02-01 14:54:59,387 | INFO     | current chi2=1.640556588016311 (change=28.49523740586022 %)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | sum of square deviations: 3212454324.4587026
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | sum of deviations: 31760883823.9266
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | mean x: 1769950443.5137615
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | mean y: 2336901.357798165
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | intersect: -17496803859.19455
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | chi2: 1.6414752362312879
[2026-02-01 23:55:56] 2026-02-01 14:54:59,388 | INFO     | current chi2=1.6414752362312879 (change=-0.05599613092819734 %)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | right removable region: 217
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | sum of square deviations: 3438604656.959646
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | sum of deviations: -15659044114.264572
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | mean x: 1769950901.013453
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | mean y: 2352290.4215246635
[2026-02-01 23:55:56] 2026-02-01 14:54:59,389 | INFO     | intersect: 8062522622.290312
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | chi2: 0.6861880388787345
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | current chi2=0.6861880388787345 (change=70.09203268368184 %)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | sum of square deviations: 3212450664.4587026
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | sum of deviations: -11777917014.183487
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | mean x: 1769951053.5137615
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | mean y: 2349668.8944954127
[2026-02-01 23:55:56] 2026-02-01 14:54:59,390 | INFO     | intersect: 6491581350.516079
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | chi2: 0.6770142526655906
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | current chi2=0.6770142526655906 (change=1.3369201579401375 %)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | left removable region: 20
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | sum of square deviations: 2370624830.9543223
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | sum of deviations: 245792950.31472132
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | mean x: 1769951023.0152285
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | mean y: 2358861.228426396
[2026-02-01 23:55:56] 2026-02-01 14:54:59,391 | INFO     | intersect: -181154564.50597852
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | chi2: 0.0013221209415316655
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | current memory leak: 0.10 B/s (using 197 data points, chi2=0.00)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | could have reported an average CPU frequency of 3621 MHz (11 samples)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | ..............................
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . Timing measurements:
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . get job = 0 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . initial setup = 8 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . payload setup = 4 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . stage-in = 0 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . payload execution = 13866 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . stage-out = 5 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | . log creation = 0 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,392 | INFO     | ..............................
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | 
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | job summary report
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | --------------------------------------------------
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | PanDA job id: 6991036796
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | task id: 48329133
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | errors: (none)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | pilot state: finished 
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | transexitcode: 0
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | exeerrorcode: 0
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | exeerrordiag: 
[2026-02-01 23:55:56] 2026-02-01 14:54:59,426 | INFO     | exitcode: 0
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | exitmsg: OK
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | cpuconsumptiontime: 37592 s
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | nevents: 400
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | neventsw: 0
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | pid: 1901287
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | pgrp: 1901287
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | corecount: 3
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | event service: False
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | sizes: {0: 2278398, 11: 2278398, 13874: 2309151, 13880: 2318149, 13881: 2318205, 13883: 2318399}
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | --------------------------------------------------
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | 
[2026-02-01 23:55:56] 2026-02-01 14:54:59,427 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | job 6991036796 has completed (purged errors)
[2026-02-01 23:55:56] 2026-02-01 14:54:59,438 | INFO     | overall cleanup function is called
[2026-02-01 23:55:56] 2026-02-01 14:55:00,444 | INFO     | --- collectZombieJob: --- 10, [1901287]
[2026-02-01 23:55:56] 2026-02-01 14:55:00,444 | INFO     | zombie collector waiting for pid 1901287
[2026-02-01 23:55:56] 2026-02-01 14:55:00,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 23:55:56] 2026-02-01 14:55:00,444 | INFO     | collected zombie processes
[2026-02-01 23:55:56] 2026-02-01 14:55:00,444 | INFO     | will attempt to kill all subprocesses of pid=1901287
[2026-02-01 23:55:56] 2026-02-01 14:55:00,474 | INFO     | process IDs to be killed: [1901287] (in reverse order)
[2026-02-01 23:55:56] 2026-02-01 14:55:00,493 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 23:55:56] 2026-02-01 14:55:00,493 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 23:55:56] 2026-02-01 14:55:00,494 | INFO     | did not find any defunct processes belonging to 1901287
[2026-02-01 23:55:56] 2026-02-01 14:55:00,495 | INFO     | did not find any defunct processes belonging to 1901287
[2026-02-01 23:55:56] 2026-02-01 14:55:00,495 | INFO     | ready for new job
[2026-02-01 23:55:56] 2026-02-01 14:55:00,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 23:55:56] 2026-02-01 14:55:00,496 | INFO     | **************************************
[2026-02-01 23:55:56] 2026-02-01 14:55:00,496 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 23:55:56] 2026-02-01 14:55:00,497 | INFO     | **************************************
[2026-02-01 23:55:56] 2026-02-01 14:55:00,497 | INFO     | 
[2026-02-01 23:55:56] 2026-02-01 14:55:00,497 | INFO     | architecture information:
[2026-02-01 23:55:56] 2026-02-01 14:55:00,497 | INFO     | executing command: cat /etc/os-release
[2026-02-01 23:55:56] 2026-02-01 14:55:00,504 | INFO     | cat /etc/os-release:
[2026-02-01 23:55:56] NAME="CentOS Linux"
[2026-02-01 23:55:56] VERSION="7 (Core)"
[2026-02-01 23:55:56] ID="centos"
[2026-02-01 23:55:56] ID_LIKE="rhel fedora"
[2026-02-01 23:55:56] VERSION_ID="7"
[2026-02-01 23:55:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 23:55:56] ANSI_COLOR="0;31"
[2026-02-01 23:55:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 23:55:56] HOME_URL="https://www.centos.org/"
[2026-02-01 23:55:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 23:55:56] 
[2026-02-01 23:55:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 23:55:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 23:55:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 23:55:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 23:55:56] 
[2026-02-01 23:55:56] 2026-02-01 14:55:00,504 | INFO     | **************************************
[2026-02-01 23:55:56] 2026-02-01 14:55:01,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | INFO     | sufficient remaining disk space (132457168896 B)
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | INFO     | update_server=False
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 23:55:56] 2026-02-01 14:55:01,015 | INFO     | aborting loop
[2026-02-01 23:55:56] 2026-02-01 14:55:01,629 | INFO     | all data control threads have been joined
[2026-02-01 23:55:56] 2026-02-01 14:55:01,634 | INFO     | all job control threads have been joined
[2026-02-01 23:55:56] 2026-02-01 14:55:01,648 | INFO     | all payload control threads have been joined
[2026-02-01 23:55:56] 2026-02-01 14:55:01,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 23:55:56] 2026-02-01 14:55:02,020 | INFO     | [job] queue monitor thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,020 | INFO     | [job] retrieve thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,021 | INFO     | [job] job monitor thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,349 | INFO     | [job] validate thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,386 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,634 | INFO     | [data] control thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,637 | INFO     | [job] control thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,654 | INFO     | [payload] control thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,798 | INFO     | [payload] failed_post thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:02,929 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:03,161 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:03,161 | INFO     | [data] copytool_in thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:03,323 | INFO     | [payload] validate_post thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:03,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 23:55:56] 2026-02-01 14:55:03,967 | INFO     | [data] copytool_out thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:07,731 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:11,725 | INFO     | job.realtimelogging is not enabled
[2026-02-01 23:55:56] 2026-02-01 14:55:12,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 23:55:56] 2026-02-01 14:55:31,135 | INFO     | PID=1896806 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 23:55:56] 2026-02-01 14:55:31,135 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 23:55:56] 2026-02-01 14:55:31,135 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 23:55:56] 2026-02-01 14:55:31,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 23:55:56] 2026-02-01 14:55:49,295 | INFO     | [monitor] cgroup control has ended
[2026-02-01 23:55:56] 2026-02-01 14:55:51,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612918839104)>', '<ExcThread(monitor, started 140612397430528)>']
[2026-02-01 23:55:56] 2026-02-01 14:55:51,236 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 23:55:56] 2026-02-01 14:55:51,236 | INFO     | [monitor] control thread has ended
[2026-02-01 23:55:56] 2026-02-01 14:55:56,222 | INFO     | all workflow threads have been joined
[2026-02-01 23:55:56] 2026-02-01 14:55:56,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 23:55:56] 2026-02-01 14:55:56,223 | INFO     | traces error code: 0
[2026-02-01 23:55:56] 2026-02-01 14:55:56,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 23:55:56] 2026-02-01 14:55:56,282 [wrapper] ==== pilot stdout END ====
[2026-02-01 23:55:56] 2026-02-01 14:55:56,283 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 23:55:56] 2026-02-01 14:55:56,285 [wrapper] pilotpid: 1896806
[2026-02-01 23:55:56] 2026-02-01 14:55:56,286 [wrapper] Pilot exit status: 0
[2026-02-01 23:55:56] 2026-02-01 14:55:56,291 [wrapper] pandaids: 6991036796
[2026-02-01 23:55:56] 2026-02-01 14:55:56,302 [wrapper] cleanup supervisor_pilot 1906540 1896807
[2026-02-01 23:55:56] 2026-02-01 14:55:56,304 [wrapper] Test setup, not cleaning
[2026-02-01 23:55:56] 2026-02-01 14:55:56,306 [wrapper] apfmon messages muted
[2026-02-01 23:55:56] 2026-02-01 14:55:56,307 [wrapper] ==== wrapper stdout END ====
[2026-02-01 23:55:56] 2026-02-01 14:55:56,309 [wrapper] ==== wrapper stderr END ====
[2026-02-01 23:55:56]  *** Error codes and diagnostics ***
[2026-02-01 23:55:56]     "exeErrorCode": 0,
[2026-02-01 23:55:56]     "exeErrorDiag": "",
[2026-02-01 23:55:56]     "pilotErrorCode": 0,
[2026-02-01 23:55:56]     "pilotErrorDiag": "",
[2026-02-01 23:55:56]  *** Listing of results directory ***
[2026-02-01 23:55:56] total 472056
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc    584422 Jan 31 11:41 pilot3.tar.gz
[2026-02-01 23:55:56] -rwx------. 1 boinc boinc     36322 Jan 31 11:42 runpilot2-wrapper.sh
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc      5111 Jan 31 11:44 queuedata.json
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc       100 Feb  1 20:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 23:55:56] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 20:00 run_atlas
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc       105 Feb  1 20:00 job.xml
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc     15845 Feb  1 20:00 start_atlas.sh
[2026-02-01 23:55:56] drwxrwx--x. 2 boinc boinc        68 Feb  1 20:00 shared
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc    597778 Feb  1 20:00 input.tar.gz
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc 273534654 Feb  1 20:00 EVNT.48329131._000005.pool.root.1
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc         0 Feb  1 20:00 boinc_lockfile
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc      2617 Feb  1 20:01 pandaJob.out
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc   1010520 Feb  1 20:03 agis_schedconf.cvmfs.json
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc       418 Feb  1 20:03 workernode_map.json
[2026-02-01 23:55:56] drwx------. 5 boinc boinc      4096 Feb  1 20:03 pilot3
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc      9318 Feb  1 20:21 init_data.xml
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc 201262314 Feb  1 23:54 HITS.48329133._000124.pool.root.1
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc        95 Feb  1 23:54 pilot_heartbeat.json
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc       530 Feb  1 23:54 boinc_task_state.xml
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc      1012 Feb  1 23:54 memory_monitor_summary.json
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc   1511668 Feb  1 23:54 agis_ddmendpoints.agis.ALL.json
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc    386700 Feb  1 23:54 log.48329133._000124.job.log.tgz.1
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc      6298 Feb  1 23:54 heartbeat.json
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc        28 Feb  1 23:55 wrapper_checkpoint.txt
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc      8192 Feb  1 23:55 boinc_mmap_file
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc      4817 Feb  1 23:55 pilotlog.txt
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc   1937884 Feb  1 23:55 log.48329133._000124.job.log.1
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc       357 Feb  1 23:55 output.list
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc       620 Feb  1 23:55 runtime_log
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc   2344960 Feb  1 23:55 result.tar.gz
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc      8775 Feb  1 23:55 runtime_log.err
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc       646 Feb  1 23:55 buzMDms7F68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmMpMKDmcHhuzn.diag
[2026-02-01 23:55:56] -rw-r--r--. 1 boinc boinc     20798 Feb  1 23:55 stderr.txt
[2026-02-01 23:55:56] HITS file was successfully produced:
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc 201262314 Feb  1 23:54 shared/HITS.pool.root.1
[2026-02-01 23:55:56]  *** Contents of shared directory: ***
[2026-02-01 23:55:56] total 466568
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc     15845 Feb  1 20:00 start_atlas.sh
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc    597778 Feb  1 20:00 input.tar.gz
[2026-02-01 23:55:56] -rw-r--r--. 2 boinc boinc 273534654 Feb  1 20:00 ATLAS.root_0
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc 201262314 Feb  1 23:54 HITS.pool.root.1
[2026-02-01 23:55:56] -rw-------. 1 boinc boinc   2344960 Feb  1 23:55 result.tar.gz
23:55:58 (1892530): run_atlas exited; CPU time 37653.943291
23:55:58 (1892530): called boinc_finish(0)

</stderr_txt>
]]>

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