Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:25:45 (4887): wrapper (7.7.26015): starting
15:25:45 (4887): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 15:25:45] Arguments: --nthreads 12
[2026-01-31 15:25:45] Threads: 12
[2026-01-31 15:25:45] Checking for CVMFS
[2026-01-31 15:25:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 15:25:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 15:25:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 15:25:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 15:25:46] 2.11.2.0 2914 383199 97496 155726 1 49 12223149 20275201 1 130560 1 164358616 99.950 23026751 16630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-31 15:25:46] CVMFS is ok
[2026-01-31 15:25:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 15:25:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 15:25:46] Further information can be found at the LHC@home message board.
[2026-01-31 15:25:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 15:25:46] Checking for apptainer binary...
[2026-01-31 15:25:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 15:25:46] Running /usr/bin/apptainer --version
[2026-01-31 15:25:46] apptainer version 1.3.2-1.el7
[2026-01-31 15:25:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 15:25:47] c-205-5.aglt2.org
[2026-01-31 15:25:47] apptainer works
[2026-01-31 15:25:47] Set ATHENA_PROC_NUMBER=12
[2026-01-31 15:25:47] Set ATHENA_CORE_NUMBER=12
[2026-01-31 15:25:47] Starting ATLAS job with PandaID=6994679763
[2026-01-31 15:25:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 16:29:20]  *** The last 200 lines of the pilot log: ***
[2026-01-31 16:29:20]  ddmendpoint_alt=None
[2026-01-31 16:29:20]  direct_access_lan=False
[2026-01-31 16:29:20]  direct_access_wan=False
[2026-01-31 16:29:20]  domain=
[2026-01-31 16:29:20]  filesize=380640
[2026-01-31 16:29:20]  filetype=log
[2026-01-31 16:29:20]  guid=4f1312bb-d85c-4d69-9fa8-a69ac374bdc0
[2026-01-31 16:29:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-31 16:29:20]  is_altstaged=None
[2026-01-31 16:29:20]  is_tar=False
[2026-01-31 16:29:20]  lfn=log.48310589._008157.job.log.tgz.1
[2026-01-31 16:29:20]  mtime=0
[2026-01-31 16:29:20]  protocol_id=None
[2026-01-31 16:29:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-31 16:29:20]  replicas=None
[2026-01-31 16:29:20]  scope=mc23_13p6TeV
[2026-01-31 16:29:20]  status=None
[2026-01-31 16:29:20]  status_code=0
[2026-01-31 16:29:20]  storage_token=
[2026-01-31 16:29:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6994679763/log.48310589._008157.job.log.tgz.1
[2026-01-31 16:29:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/cd/log.48310589._008157.job.log.tgz.1
[2026-01-31 16:29:20]  workdir=None
[2026-01-31 16:29:20] ]
[2026-01-31 16:29:20] 2026-01-31 21:28:25,903 | INFO     | transferring file log.48310589._008157.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6994679763/log.48310589._008157.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-31 16:29:20] 2026-01-31 21:28:25,903 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6994679763/log.48310589._008157.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310589._008157.job
[2026-01-31 16:29:20] 2026-01-31 21:28:25,925 | INFO     | adding to output.list: log.48310589._008157.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/03/cd/log.48310589._008157.job.log.tg
[2026-01-31 16:29:20] 2026-01-31 21:28:25,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-31 16:29:20] 2026-01-31 21:28:25,926 | INFO     | summary of transferred files:
[2026-01-31 16:29:20] 2026-01-31 21:28:25,926 | INFO     |  -- lfn=log.48310589._008157.job.log.tgz.1, status_code=0, status=transferred
[2026-01-31 16:29:20] 2026-01-31 21:28:25,926 | INFO     | stage-out finished correctly
[2026-01-31 16:29:20] 2026-01-31 21:28:26,008 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-31 16:29:20] 2026-01-31 21:28:26,088 | INFO     | job 6994679763 has state=finished
[2026-01-31 16:29:20] 2026-01-31 21:28:26,089 | INFO     | preparing for final server update for job 6994679763 in state='finished'
[2026-01-31 16:29:20] 2026-01-31 21:28:26,154 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,154 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6994679763/jobReport.json
[2026-01-31 16:29:20] 2026-01-31 21:28:26,157 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-31 16:29:20] 2026-01-31 21:28:26,157 | INFO     | this job has now completed (state=finished)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,158 | INFO     | log transfer has been attempted: DONE
[2026-01-31 16:29:20] 2026-01-31 21:28:26,158 | INFO     | job 6994679763 has finished - writing final server update
[2026-01-31 16:29:20] 2026-01-31 21:28:26,158 | INFO     | total number of processed events: 400 (read)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,160 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994679763/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,160 | INFO     | extracted standard info from prmon json
[2026-01-31 16:29:20] 2026-01-31 21:28:26,160 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 16:29:20] 2026-01-31 21:28:26,160 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 16:29:20] 2026-01-31 21:28:26,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 16:29:20] 2026-01-31 21:28:26,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 16:29:20] 2026-01-31 21:28:26,162 | INFO     | fitting pss+swap vs Time
[2026-01-31 16:29:20] 2026-01-31 21:28:26,162 | INFO     | sum of square deviations: 48810217.5
[2026-01-31 16:29:20] 2026-01-31 21:28:26,162 | INFO     | sum of deviations: -3296711816.0000005
[2026-01-31 16:29:20] 2026-01-31 21:28:26,162 | INFO     | mean x: 1769893114.5
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | mean y: 2909193.962962963
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | intersect: 119544018463.33246
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | chi2: 0.05330075599288776
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | current memory leak: -67.54 B/s (using 54 data points, chi2=0.05)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | could have reported an average CPU frequency of 1717 MHz (6 samples)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,163 | INFO     | ..............................
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . Timing measurements:
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . get job = 0 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . initial setup = 7 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . payload setup = 7 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . stage-in = 0 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . payload execution = 3713 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . stage-out = 0 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | . log creation = 0 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,164 | INFO     | ..............................
[2026-01-31 16:29:20] 2026-01-31 21:28:26,591 | INFO     | 
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | job summary report
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | --------------------------------------------------
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | PanDA job id: 6994679763
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | task id: 48310589
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | errors: (none)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,592 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | pilot state: finished 
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | transexitcode: 0
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | exeerrorcode: 0
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | exeerrordiag: 
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | exitcode: 0
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | exitmsg: OK
[2026-01-31 16:29:20] 2026-01-31 21:28:26,593 | INFO     | cpuconsumptiontime: 40545 s
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | nevents: 400
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | neventsw: 0
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | pid: 13282
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | pgrp: 13282
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | corecount: 12
[2026-01-31 16:29:20] 2026-01-31 21:28:26,594 | INFO     | event service: False
[2026-01-31 16:29:20] 2026-01-31 21:28:26,595 | INFO     | sizes: {0: 2277844, 1: 2278305, 12: 2278305, 3723: 2304029, 3725: 2313221}
[2026-01-31 16:29:20] 2026-01-31 21:28:26,595 | INFO     | --------------------------------------------------
[2026-01-31 16:29:20] 2026-01-31 21:28:26,595 | INFO     | 
[2026-01-31 16:29:20] 2026-01-31 21:28:26,595 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-31 16:29:20] 2026-01-31 21:28:26,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,619 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,619 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,619 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | job 6994679763 has completed (purged errors)
[2026-01-31 16:29:20] 2026-01-31 21:28:26,621 | INFO     | overall cleanup function is called
[2026-01-31 16:29:20] 2026-01-31 21:28:27,629 | INFO     | --- collectZombieJob: --- 10, [13282]
[2026-01-31 16:29:20] 2026-01-31 21:28:27,629 | INFO     | zombie collector waiting for pid 13282
[2026-01-31 16:29:20] 2026-01-31 21:28:27,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 16:29:20] 2026-01-31 21:28:27,629 | INFO     | collected zombie processes
[2026-01-31 16:29:20] 2026-01-31 21:28:27,630 | INFO     | will attempt to kill all subprocesses of pid=13282
[2026-01-31 16:29:20] 2026-01-31 21:28:27,722 | INFO     | process IDs to be killed: [13282] (in reverse order)
[2026-01-31 16:29:20] 2026-01-31 21:28:27,773 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 16:29:20] 2026-01-31 21:28:27,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 16:29:20] 2026-01-31 21:28:27,777 | INFO     | did not find any defunct processes belonging to 13282
[2026-01-31 16:29:20] 2026-01-31 21:28:27,780 | INFO     | did not find any defunct processes belonging to 13282
[2026-01-31 16:29:20] 2026-01-31 21:28:27,780 | INFO     | ready for new job
[2026-01-31 16:29:20] 2026-01-31 21:28:27,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 16:29:20] 2026-01-31 21:28:27,781 | INFO     | **************************************
[2026-01-31 16:29:20] 2026-01-31 21:28:27,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 16:29:20] 2026-01-31 21:28:27,781 | INFO     | **************************************
[2026-01-31 16:29:20] 2026-01-31 21:28:27,781 | INFO     | 
[2026-01-31 16:29:20] 2026-01-31 21:28:27,782 | INFO     | architecture information:
[2026-01-31 16:29:20] 2026-01-31 21:28:27,782 | INFO     | executing command: cat /etc/os-release
[2026-01-31 16:29:20] 2026-01-31 21:28:27,798 | INFO     | cat /etc/os-release:
[2026-01-31 16:29:20] NAME="CentOS Linux"
[2026-01-31 16:29:20] VERSION="7 (Core)"
[2026-01-31 16:29:20] ID="centos"
[2026-01-31 16:29:20] ID_LIKE="rhel fedora"
[2026-01-31 16:29:20] VERSION_ID="7"
[2026-01-31 16:29:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 16:29:20] ANSI_COLOR="0;31"
[2026-01-31 16:29:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 16:29:20] HOME_URL="https://www.centos.org/"
[2026-01-31 16:29:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 16:29:20] 
[2026-01-31 16:29:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 16:29:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 16:29:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 16:29:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 16:29:20] 
[2026-01-31 16:29:20] 2026-01-31 21:28:27,798 | INFO     | **************************************
[2026-01-31 16:29:20] 2026-01-31 21:28:28,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-31 16:29:20] 2026-01-31 21:28:28,317 | INFO     | sufficient remaining disk space (28819062784 B)
[2026-01-31 16:29:20] 2026-01-31 21:28:28,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 16:29:20] 2026-01-31 21:28:28,318 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 16:29:20] 2026-01-31 21:28:28,318 | INFO     | update_server=False
[2026-01-31 16:29:20] 2026-01-31 21:28:28,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 16:29:20] 2026-01-31 21:28:28,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 16:29:20] 2026-01-31 21:28:28,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 16:29:20] 2026-01-31 21:28:28,615 | INFO     | aborting loop
[2026-01-31 16:29:20] 2026-01-31 21:28:28,723 | INFO     | all job control threads have been joined
[2026-01-31 16:29:20] 2026-01-31 21:28:29,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 16:29:20] 2026-01-31 21:28:29,139 | INFO     | all data control threads have been joined
[2026-01-31 16:29:20] 2026-01-31 21:28:29,321 | INFO     | [job] retrieve thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,363 | INFO     | all payload control threads have been joined
[2026-01-31 16:29:20] 2026-01-31 21:28:29,557 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,578 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,587 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,620 | INFO     | [job] job monitor thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,731 | INFO     | [job] control thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,806 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:29,945 | INFO     | [payload] validate_post thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:30,091 | INFO     | [data] copytool_in thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:30,145 | INFO     | [data] control thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:30,369 | INFO     | [payload] control thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:30,582 | INFO     | [payload] failed_post thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:30,703 | INFO     | [job] validate thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:31,020 | INFO     | [data] copytool_out thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:31,251 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 16:29:20] 2026-01-31 21:28:32,256 | INFO     | [job] queue monitor thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:32,325 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 16:29:20] 2026-01-31 21:28:58,779 | INFO     | PID=8858 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-31 16:29:20] 2026-01-31 21:28:58,780 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 16:29:20] 2026-01-31 21:28:58,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 16:29:20] 2026-01-31 21:28:58,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 16:29:20] 2026-01-31 21:29:14,707 | INFO     | [monitor] cgroup control has ended
[2026-01-31 16:29:20] 2026-01-31 21:29:14,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681719416640)>', '<ExcThread(monitor, started 140680731006720)>']
[2026-01-31 16:29:20] 2026-01-31 21:29:14,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 16:29:20] 2026-01-31 21:29:14,856 | INFO     | [monitor] control thread has ended
[2026-01-31 16:29:20] 2026-01-31 21:29:19,800 | INFO     | all workflow threads have been joined
[2026-01-31 16:29:20] 2026-01-31 21:29:19,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 16:29:20] 2026-01-31 21:29:19,809 | INFO     | traces error code: 0
[2026-01-31 16:29:20] 2026-01-31 21:29:19,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 16:29:20] 2026-01-31 21:29:19,911 [wrapper] ==== pilot stdout END ====
[2026-01-31 16:29:20] 2026-01-31 21:29:19,915 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 16:29:20] 2026-01-31 21:29:19,919 [wrapper] pilotpid: 8858
[2026-01-31 16:29:20] 2026-01-31 21:29:19,923 [wrapper] Pilot exit status: 0
[2026-01-31 16:29:20] 2026-01-31 21:29:19,938 [wrapper] pandaids: 6994679763
[2026-01-31 16:29:20] 2026-01-31 21:29:19,989 [wrapper] cleanup supervisor_pilot 31828 8859
[2026-01-31 16:29:20] 2026-01-31 21:29:19,993 [wrapper] Test setup, not cleaning
[2026-01-31 16:29:20] 2026-01-31 21:29:19,997 [wrapper] apfmon messages muted
[2026-01-31 16:29:20] 2026-01-31 21:29:20,001 [wrapper] ==== wrapper stdout END ====
[2026-01-31 16:29:20] 2026-01-31 21:29:20,005 [wrapper] ==== wrapper stderr END ====
[2026-01-31 16:29:20]  *** Error codes and diagnostics ***
[2026-01-31 16:29:20]     "exeErrorCode": 0,
[2026-01-31 16:29:20]     "exeErrorDiag": "",
[2026-01-31 16:29:20]     "pilotErrorCode": 0,
[2026-01-31 16:29:20]     "pilotErrorDiag": "",
[2026-01-31 16:29:20]  *** Listing of results directory ***
[2026-01-31 16:29:20] total 658068
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas    584422 Jan 31 08:56 pilot3.tar.gz
[2026-01-31 16:29:20] -rwx------ 1 boincer umatlas     36322 Jan 31 08:56 runpilot2-wrapper.sh
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas      5111 Jan 31 08:57 queuedata.json
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas       100 Jan 31 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 16:29:20] -rwxr-xr-x 1 boincer umatlas      7986 Jan 31 15:25 run_atlas
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas       105 Jan 31 15:25 job.xml
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas 490823779 Jan 31 15:25 EVNT.48310585._000156.pool.root.1
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 15:25 start_atlas.sh
[2026-01-31 16:29:20] drwxrwx--x 2 boincer umatlas      4096 Jan 31 15:25 shared
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas    597752 Jan 31 15:25 input.tar.gz
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas         0 Jan 31 15:25 boinc_lockfile
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas      2528 Jan 31 15:25 pandaJob.out
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas        57 Jan 31 15:25 setup.sh.local
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas   1010528 Jan 31 15:26 agis_schedconf.cvmfs.json
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas   1511668 Jan 31 15:26 agis_ddmendpoints.agis.ALL.json
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas       444 Jan 31 15:26 workernode_map.json
[2026-01-31 16:29:20] drwx------ 5 boincer umatlas      4096 Jan 31 15:26 pilot3
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas      5952 Jan 31 16:27 init_data.xml
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas 177217582 Jan 31 16:27 HITS.48310589._008157.pool.root.1
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas      1044 Jan 31 16:28 memory_monitor_summary.json
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas    380640 Jan 31 16:28 log.48310589._008157.job.log.tgz.1
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas      6409 Jan 31 16:28 heartbeat.json
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas       530 Jan 31 16:28 boinc_task_state.xml
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas        95 Jan 31 16:28 pilot_heartbeat.json
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas      8192 Jan 31 16:29 boinc_mmap_file
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas        27 Jan 31 16:29 wrapper_checkpoint.txt
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas      4741 Jan 31 16:29 pilotlog.txt
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas    553481 Jan 31 16:29 log.48310589._008157.job.log.1
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas       357 Jan 31 16:29 output.list
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas       620 Jan 31 16:29 runtime_log
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas    952320 Jan 31 16:29 result.tar.gz
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas       658 Jan 31 16:29 szZLDmAeQ68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZzNKDmAKIZCn.diag
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas      9338 Jan 31 16:29 runtime_log.err
[2026-01-31 16:29:20] -rw-r--r-- 1 boincer umatlas     20863 Jan 31 16:29 stderr.txt
[2026-01-31 16:29:20] HITS file was successfully produced:
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas 177217582 Jan 31 16:27 shared/HITS.pool.root.1
[2026-01-31 16:29:20]  *** Contents of shared directory: ***
[2026-01-31 16:29:20] total 653932
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas 490823779 Jan 31 15:25 ATLAS.root_0
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 15:25 start_atlas.sh
[2026-01-31 16:29:20] -rw-r--r-- 2 boincer umatlas    597752 Jan 31 15:25 input.tar.gz
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas 177217582 Jan 31 16:27 HITS.pool.root.1
[2026-01-31 16:29:20] -rw------- 1 boincer umatlas    952320 Jan 31 16:29 result.tar.gz
16:29:21 (4887): run_atlas exited; CPU time 40533.383173
16:29:21 (4887): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN