Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:37:15 (157381): wrapper (7.7.26015): starting
16:37:15 (157381): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 16:37:15] Arguments: --nthreads 4
[2026-02-01 16:37:15] Threads: 4
[2026-02-01 16:37:15] Checking for CVMFS
[2026-02-01 16:37:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 16:37:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 16:37:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 16:37:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 16:37:16] 2.9.2.0 3251459 5691 99256 155755 2 50 23084330 36864001 0 130560 0 2720575 99.987 187794 6972 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 16:37:16] CVMFS is ok
[2026-02-01 16:37:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 16:37:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 16:37:16] Further information can be found at the LHC@home message board.
[2026-02-01 16:37:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 16:37:16] Checking for apptainer binary...
[2026-02-01 16:37:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 16:37:16] Running /usr/bin/apptainer --version
[2026-02-01 16:37:16] apptainer version 1.4.1-1.1
[2026-02-01 16:37:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 16:37:16] thA314
[2026-02-01 16:37:16] apptainer works
[2026-02-01 16:37:16] Set ATHENA_PROC_NUMBER=4
[2026-02-01 16:37:16] Set ATHENA_CORE_NUMBER=4
[2026-02-01 16:37:16] Starting ATLAS job with PandaID=6994779415
[2026-02-01 16:37:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 17:52:40]  *** The last 200 lines of the pilot log: ***
[2026-02-01 17:52:40]  filesize=287105
[2026-02-01 17:52:40]  filetype=log
[2026-02-01 17:52:40]  guid=2e16ce98-9c45-453c-9683-04883db9acfa
[2026-02-01 17:52:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 17:52:40]  is_altstaged=None
[2026-02-01 17:52:40]  is_tar=False
[2026-02-01 17:52:40]  lfn=log.48317872._015667.job.log.tgz.1
[2026-02-01 17:52:40]  mtime=0
[2026-02-01 17:52:40]  protocol_id=None
[2026-02-01 17:52:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 17:52:40]  replicas=None
[2026-02-01 17:52:40]  scope=mc23_13p6TeV
[2026-02-01 17:52:40]  status=None
[2026-02-01 17:52:40]  status_code=0
[2026-02-01 17:52:40]  storage_token=
[2026-02-01 17:52:40]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6994779415/log.48317872._015667.job.log.tgz.1
[2026-02-01 17:52:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/a9/log.48317872._015667.job.log.tgz.1
[2026-02-01 17:52:40]  workdir=None
[2026-02-01 17:52:40] ]
[2026-02-01 17:52:40] 2026-02-01 16:51:36,488 | INFO     | transferring file log.48317872._015667.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6994779415/log.48317872._015667.job.log.tgz.1 to /local/data/boinc/
[2026-02-01 17:52:40] 2026-02-01 16:51:36,488 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6994779415/log.48317872._015667.job.log.tgz.1 /local/data/boinc/slots/0/log.48317872._0156
[2026-02-01 17:52:40] 2026-02-01 16:51:36,508 | INFO     | adding to output.list: log.48317872._015667.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/a9/log.48317872._015667.job.log.tg
[2026-02-01 17:52:40] 2026-02-01 16:51:36,508 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 17:52:40] 2026-02-01 16:51:36,508 | INFO     | summary of transferred files:
[2026-02-01 17:52:40] 2026-02-01 16:51:36,508 | INFO     |  -- lfn=log.48317872._015667.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 17:52:40] 2026-02-01 16:51:36,508 | INFO     | stage-out finished correctly
[2026-02-01 17:52:40] 2026-02-01 16:51:36,548 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 17:52:40] 2026-02-01 16:51:36,671 | INFO     | monitor loop #344: job 0:6994779415 is in state 'finished'
[2026-02-01 17:52:40] 2026-02-01 16:51:36,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,136 | INFO     | time since job start (4448s) is within the limit (349056.0s)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,669 | INFO     | job 6994779415 has state=finished
[2026-02-01 17:52:40] 2026-02-01 16:51:37,669 | INFO     | preparing for final server update for job 6994779415 in state='finished'
[2026-02-01 17:52:40] 2026-02-01 16:51:37,669 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6994779415/jobReport.json
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | this job has now completed (state=finished)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | log transfer has been attempted: DONE
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | job 6994779415 has finished - writing final server update
[2026-02-01 17:52:40] 2026-02-01 16:51:37,671 | INFO     | total number of processed events: 400 (read)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994779415/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | INFO     | extracted standard info from prmon json
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 17:52:40] 2026-02-01 16:51:37,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 17:52:40] 2026-02-01 16:51:37,674 | INFO     | fitting pss+swap vs Time
[2026-02-01 17:52:40] 2026-02-01 16:51:37,674 | INFO     | sum of square deviations: 89127252.5
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | sum of deviations: -9546248100.5
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | mean x: 1769962556.5
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | mean y: 2516020.0454545454
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | intersect: 189579791421.23938
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | chi2: 0.04849435628722775
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | current memory leak: -107.11 B/s (using 66 data points, chi2=0.05)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | could have reported an average CPU frequency of 3304 MHz (6 samples)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | ..............................
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . Timing measurements:
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . get job = 0 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . initial setup = 4 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . payload setup = 4 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . stage-in = 0 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . payload execution = 4427 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . stage-out = 0 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | . log creation = 0 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,675 | INFO     | ..............................
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | 
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | job summary report
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | --------------------------------------------------
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | PanDA job id: 6994779415
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | task id: 48317872
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | errors: (none)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | pilot state: finished 
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | transexitcode: 0
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | exeerrorcode: 0
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | exeerrordiag: 
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | exitcode: 0
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | exitmsg: OK
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | cpuconsumptiontime: 16794 s
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | nevents: 400
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | neventsw: 0
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | pid: 166065
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | pgrp: 166065
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | corecount: 4
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | event service: False
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | sizes: {0: 2278068, 1: 2278274, 11: 2278302, 4436: 2313544, 4437: 2313682}
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | --------------------------------------------------
[2026-02-01 17:52:40] 2026-02-01 16:51:37,715 | INFO     | 
[2026-02-01 17:52:40] 2026-02-01 16:51:37,716 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 17:52:40] 2026-02-01 16:51:37,735 | INFO     | job 6994779415 has completed (purged errors)
[2026-02-01 17:52:40] 2026-02-01 16:51:37,736 | INFO     | overall cleanup function is called
[2026-02-01 17:52:40] 2026-02-01 16:51:38,743 | INFO     | --- collectZombieJob: --- 10, [166065]
[2026-02-01 17:52:40] 2026-02-01 16:51:38,743 | INFO     | zombie collector waiting for pid 166065
[2026-02-01 17:52:40] 2026-02-01 16:51:38,743 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 17:52:40] 2026-02-01 16:51:38,743 | INFO     | collected zombie processes
[2026-02-01 17:52:40] 2026-02-01 16:51:38,743 | INFO     | will attempt to kill all subprocesses of pid=166065
[2026-02-01 17:52:40] 2026-02-01 16:51:38,793 | INFO     | process IDs to be killed: [166065] (in reverse order)
[2026-02-01 17:52:40] 2026-02-01 16:51:38,829 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 17:52:40] 2026-02-01 16:51:38,829 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 17:52:40] 2026-02-01 16:51:38,831 | INFO     | did not find any defunct processes belonging to 166065
[2026-02-01 17:52:40] 2026-02-01 16:51:38,833 | INFO     | did not find any defunct processes belonging to 166065
[2026-02-01 17:52:40] 2026-02-01 16:51:38,833 | INFO     | ready for new job
[2026-02-01 17:52:40] 2026-02-01 16:51:38,833 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 17:52:40] 2026-02-01 16:51:38,834 | INFO     | **************************************
[2026-02-01 17:52:40] 2026-02-01 16:51:38,834 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 17:52:40] 2026-02-01 16:51:38,834 | INFO     | **************************************
[2026-02-01 17:52:40] 2026-02-01 16:51:38,834 | INFO     | 
[2026-02-01 17:52:40] 2026-02-01 16:51:38,834 | INFO     | architecture information:
[2026-02-01 17:52:40] 2026-02-01 16:51:38,835 | INFO     | executing command: cat /etc/os-release
[2026-02-01 17:52:40] 2026-02-01 16:51:38,849 | INFO     | cat /etc/os-release:
[2026-02-01 17:52:40] NAME="CentOS Linux"
[2026-02-01 17:52:40] VERSION="7 (Core)"
[2026-02-01 17:52:40] ID="centos"
[2026-02-01 17:52:40] ID_LIKE="rhel fedora"
[2026-02-01 17:52:40] VERSION_ID="7"
[2026-02-01 17:52:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 17:52:40] ANSI_COLOR="0;31"
[2026-02-01 17:52:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 17:52:40] HOME_URL="https://www.centos.org/"
[2026-02-01 17:52:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 17:52:40] 
[2026-02-01 17:52:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 17:52:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 17:52:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 17:52:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 17:52:40] 
[2026-02-01 17:52:40] 2026-02-01 16:51:38,849 | INFO     | **************************************
[2026-02-01 17:52:40] 2026-02-01 16:51:39,353 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | INFO     | sufficient remaining disk space (231160676352 B)
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | INFO     | update_server=False
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 17:52:40] 2026-02-01 16:51:39,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:52:40] 2026-02-01 16:51:39,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 17:52:40] 2026-02-01 16:51:39,592 | INFO     | all payload control threads have been joined
[2026-02-01 17:52:40] 2026-02-01 16:51:39,713 | INFO     | all data control threads have been joined
[2026-02-01 17:52:40] 2026-02-01 16:51:40,017 | INFO     | all job control threads have been joined
[2026-02-01 17:52:40] 2026-02-01 16:51:40,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 17:52:40] 2026-02-01 16:51:40,180 | INFO     | aborting loop
[2026-02-01 17:52:40] 2026-02-01 16:51:40,375 | INFO     | [job] retrieve thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:40,376 | INFO     | [job] queue monitor thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:40,443 | INFO     | [payload] failed_post thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:40,597 | INFO     | [payload] control thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:40,719 | INFO     | [data] control thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,022 | INFO     | [job] control thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,186 | INFO     | [job] job monitor thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,500 | INFO     | [job] validate thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,560 | INFO     | [data] copytool_out thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,597 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,604 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,643 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,815 | INFO     | [data] copytool_in thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:41,945 | INFO     | [payload] validate_post thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:42,547 | INFO     | job.realtimelogging is not enabled
[2026-02-01 17:52:40] 2026-02-01 16:51:42,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 17:52:40] 2026-02-01 16:51:43,552 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:51:46,599 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 17:52:40] 2026-02-01 16:52:10,263 | INFO     | PID=161507 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 17:52:40] 2026-02-01 16:52:10,264 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 17:52:40] 2026-02-01 16:52:10,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 17:52:40] 2026-02-01 16:52:10,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 17:52:40] 2026-02-01 16:52:24,305 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-02-01 17:52:40] 2026-02-01 16:52:33,813 | INFO     | [monitor] cgroup control has ended
[2026-02-01 17:52:40] 2026-02-01 16:52:34,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139690219845440)>', '<ExcThread(monitor, started 139688903960320)>']
[2026-02-01 17:52:40] 2026-02-01 16:52:35,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 17:52:40] 2026-02-01 16:52:35,395 | INFO     | [monitor] control thread has ended
[2026-02-01 17:52:40] 2026-02-01 16:52:39,859 | INFO     | all workflow threads have been joined
[2026-02-01 17:52:40] 2026-02-01 16:52:39,859 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 17:52:40] 2026-02-01 16:52:39,860 | INFO     | traces error code: 0
[2026-02-01 17:52:40] 2026-02-01 16:52:39,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 17:52:40] 2026-02-01 16:52:39,938 [wrapper] ==== pilot stdout END ====
[2026-02-01 17:52:40] 2026-02-01 16:52:39,942 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 17:52:40] 2026-02-01 16:52:39,946 [wrapper] pilotpid: 161507
[2026-02-01 17:52:40] 2026-02-01 16:52:39,950 [wrapper] Pilot exit status: 0
[2026-02-01 17:52:40] 2026-02-01 16:52:39,963 [wrapper] pandaids: 6994779415
[2026-02-01 17:52:40] 2026-02-01 16:52:39,988 [wrapper] cleanup supervisor_pilot  172724 161508
[2026-02-01 17:52:40] 2026-02-01 16:52:39,991 [wrapper] Test setup, not cleaning
[2026-02-01 17:52:40] 2026-02-01 16:52:39,996 [wrapper] apfmon messages muted
[2026-02-01 17:52:40] 2026-02-01 16:52:39,999 [wrapper] ==== wrapper stdout END ====
[2026-02-01 17:52:40] 2026-02-01 16:52:40,003 [wrapper] ==== wrapper stderr END ====
[2026-02-01 17:52:40]  *** Error codes and diagnostics ***
[2026-02-01 17:52:40]     "exeErrorCode": 0,
[2026-02-01 17:52:40]     "exeErrorDiag": "",
[2026-02-01 17:52:40]     "pilotErrorCode": 0,
[2026-02-01 17:52:40]     "pilotErrorDiag": "",
[2026-02-01 17:52:40]  *** Listing of results directory ***
[2026-02-01 17:52:40] total 672508
[2026-02-01 17:52:40] -rwx------ 1 boinc boinc     36322 Jan 31 17:04 runpilot2-wrapper.sh
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc    584422 Jan 31 17:04 pilot3.tar.gz
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc      5111 Jan 31 17:05 queuedata.json
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc       100 Feb  1 16:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 17:52:40] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 16:37 run_atlas
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc       105 Feb  1 16:37 job.xml
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc 496728026 Feb  1 16:37 EVNT.48317869._000285.pool.root.1
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc    597755 Feb  1 16:37 input.tar.gz
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc     15845 Feb  1 16:37 start_atlas.sh
[2026-02-01 17:52:40] drwxrwx--x 2 boinc boinc      4096 Feb  1 16:37 shared
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc         0 Feb  1 16:37 boinc_setup_complete
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc      6376 Feb  1 16:37 init_data.xml
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc         0 Feb  1 16:37 boinc_lockfile
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc      2519 Feb  1 16:37 pandaJob.out
[2026-02-01 17:52:40] -rw------- 1 boinc boinc   1010520 Feb  1 16:37 agis_schedconf.cvmfs.json
[2026-02-01 17:52:40] -rw------- 1 boinc boinc   1511668 Feb  1 16:37 agis_ddmendpoints.agis.ALL.json
[2026-02-01 17:52:40] -rw------- 1 boinc boinc       426 Feb  1 16:37 workernode_map.json
[2026-02-01 17:52:40] drwx------ 5 boinc boinc      4096 Feb  1 16:37 pilot3
[2026-02-01 17:52:40] -rw------- 1 boinc boinc 186089013 Feb  1 17:51 HITS.48317872._015667.pool.root.1
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc       530 Feb  1 17:51 boinc_task_state.xml
[2026-02-01 17:52:40] -rw------- 1 boinc boinc      1020 Feb  1 17:51 memory_monitor_summary.json
[2026-02-01 17:52:40] -rw------- 1 boinc boinc    287105 Feb  1 17:51 log.48317872._015667.job.log.tgz.1
[2026-02-01 17:52:40] -rw------- 1 boinc boinc      6316 Feb  1 17:51 heartbeat.json
[2026-02-01 17:52:40] -rw------- 1 boinc boinc        95 Feb  1 17:52 pilot_heartbeat.json
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc        27 Feb  1 17:52 wrapper_checkpoint.txt
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc      8192 Feb  1 17:52 boinc_mmap_file
[2026-02-01 17:52:40] -rw------- 1 boinc boinc      4819 Feb  1 17:52 pilotlog.txt
[2026-02-01 17:52:40] -rw------- 1 boinc boinc    656411 Feb  1 17:52 log.48317872._015667.job.log.1
[2026-02-01 17:52:40] -rw------- 1 boinc boinc       357 Feb  1 17:52 output.list
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc       620 Feb  1 17:52 runtime_log
[2026-02-01 17:52:40] -rw------- 1 boinc boinc    962560 Feb  1 17:52 result.tar.gz
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc      8896 Feb  1 17:52 runtime_log.err
[2026-02-01 17:52:40] -rw------- 1 boinc boinc       657 Feb  1 17:52 0saMDmTdS68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKEOKDmEjr2Im.diag
[2026-02-01 17:52:40] -rw-r--r-- 1 boinc boinc     21148 Feb  1 17:52 stderr.txt
[2026-02-01 17:52:40] HITS file was successfully produced:
[2026-02-01 17:52:40] -rw------- 1 boinc boinc 186089013 Feb  1 17:51 shared/HITS.pool.root.1
[2026-02-01 17:52:40]  *** Contents of shared directory: ***
[2026-02-01 17:52:40] total 668364
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc 496728026 Feb  1 16:37 ATLAS.root_0
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc    597755 Feb  1 16:37 input.tar.gz
[2026-02-01 17:52:40] -rw-r--r-- 2 boinc boinc     15845 Feb  1 16:37 start_atlas.sh
[2026-02-01 17:52:40] -rw------- 1 boinc boinc 186089013 Feb  1 17:51 HITS.pool.root.1
[2026-02-01 17:52:40] -rw------- 1 boinc boinc    962560 Feb  1 17:52 result.tar.gz
17:52:41 (157381): run_atlas exited; CPU time 16818.815764
17:52:41 (157381): called boinc_finish(0)

</stderr_txt>
]]>

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