Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:27:49 (3046935): wrapper (7.7.26015): starting
15:27:49 (3046935): wrapper: running run_atlas (--nthreads 9)
[2026-01-31 15:27:49] Arguments: --nthreads 9
[2026-01-31 15:27:49] Threads: 9
[2026-01-31 15:27:49] Checking for CVMFS
[2026-01-31 15:27:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 15:27:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 15:27:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 15:27:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 15:27:52] 2.13.3.0 15733 124131 649156 155726 1 57 19903493 32935936 29087 16776704 0 579492550 99.671 475410957 27563 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-31 15:27:52] CVMFS is ok
[2026-01-31 15:27:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 15:27:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 15:27:52] Further information can be found at the LHC@home message board.
[2026-01-31 15:27:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 15:27:52] Checking for apptainer binary...
[2026-01-31 15:27:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 15:27:52] Running /usr/bin/apptainer --version
[2026-01-31 15:27:52] apptainer version 1.4.5-2.el9
[2026-01-31 15:27:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 15:27:53] c-8-39.aglt2.org
[2026-01-31 15:27:53] apptainer works
[2026-01-31 15:27:53] Set ATHENA_PROC_NUMBER=9
[2026-01-31 15:27:53] Set ATHENA_CORE_NUMBER=9
[2026-01-31 15:27:53] Starting ATLAS job with PandaID=6994680106
[2026-01-31 15:27:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 04:49:16]  *** The last 200 lines of the pilot log: ***
[2026-02-01 04:49:16] 2026-02-01 07:16:30,864 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6994680106/jobReport.json
[2026-02-01 04:49:16] 2026-02-01 07:16:30,866 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-01 04:49:16] 2026-02-01 07:16:30,867 | INFO     | this job has now completed (state=finished)
[2026-02-01 04:49:16] 2026-02-01 07:16:30,867 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 04:49:16] 2026-02-01 07:16:30,867 | INFO     | log transfer has been attempted: DONE
[2026-02-01 04:49:16] 2026-02-01 07:16:30,908 | INFO     | job 6994680106 has finished - writing final server update
[2026-02-01 04:49:16] 2026-02-01 07:16:30,909 | INFO     | total number of processed events: 400 (read)
[2026-02-01 04:49:16] 2026-02-01 07:16:31,232 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994680106/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 04:49:16] 2026-02-01 07:16:31,504 | INFO     | monitor loop #1728: job 0:6994680106 is in state 'finished'
[2026-02-01 04:49:16] 2026-02-01 07:16:31,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 04:49:16] 2026-02-01 07:16:31,513 | INFO     | extracted standard info from prmon json
[2026-02-01 04:49:16] 2026-02-01 07:16:31,514 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 04:49:16] 2026-02-01 07:16:31,514 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 04:49:16] 2026-02-01 07:16:31,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 04:49:16] 2026-02-01 07:16:31,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 04:49:16] 2026-02-01 07:16:32,097 | INFO     | fitting pss+swap vs Time
[2026-02-01 04:49:16] 2026-02-01 07:16:32,098 | INFO     | sum of square deviations: 79028725976.62456
[2026-02-01 04:49:16] 2026-02-01 07:16:32,290 | INFO     | sum of deviations: 87588688869.44144
[2026-02-01 04:49:16] 2026-02-01 07:16:32,290 | INFO     | mean x: 1769910804.7507887
[2026-02-01 04:49:16] 2026-02-01 07:16:32,291 | INFO     | mean y: 2557502.616719243
[2026-02-01 04:49:16] 2026-02-01 07:16:32,291 | INFO     | intersect: -1959060439.3178785
[2026-02-01 04:49:16] 2026-02-01 07:16:32,292 | INFO     | chi2: 3.4158208904625926
[2026-02-01 04:49:16] 2026-02-01 07:16:32,293 | INFO     | sum of square deviations: 77173536640.22899
[2026-02-01 04:49:16] 2026-02-01 07:16:32,596 | INFO     | sum of deviations: 129666656944.56445
[2026-02-01 04:49:16] 2026-02-01 07:16:32,596 | INFO     | mean x: 1769910652.2384737
[2026-02-01 04:49:16] 2026-02-01 07:16:32,596 | INFO     | mean y: 2560939.6295707473
[2026-02-01 04:49:16] 2026-02-01 07:16:32,597 | INFO     | intersect: -2971235614.961704
[2026-02-01 04:49:16] 2026-02-01 07:16:32,597 | INFO     | chi2: 2.5983093999786657
[2026-02-01 04:49:16] 2026-02-01 07:16:32,598 | INFO     | current chi2=2.5983093999786657 (change=23.933090074087996 %)
[2026-02-01 04:49:16] 2026-02-01 07:16:32,598 | INFO     | right removable region: 628
[2026-02-01 04:49:16] 2026-02-01 07:16:32,766 | INFO     | sum of square deviations: 77173593511.24011
[2026-02-01 04:49:16] 2026-02-01 07:16:32,957 | INFO     | sum of deviations: -71347768767.28783
[2026-02-01 04:49:16] 2026-02-01 07:16:32,958 | INFO     | mean x: 1769910957.2607312
[2026-02-01 04:49:16] 2026-02-01 07:16:32,958 | INFO     | mean y: 2570548.1907790145
[2026-02-01 04:49:16] 2026-02-01 07:16:32,958 | INFO     | intersect: 1638871152.7354605
[2026-02-01 04:49:16] 2026-02-01 07:16:32,959 | INFO     | chi2: 1.0449058363983728
[2026-02-01 04:49:16] 2026-02-01 07:16:32,959 | INFO     | current chi2=1.0449058363983728 (change=69.40981773031827 %)
[2026-02-01 04:49:16] 2026-02-01 07:16:33,047 | INFO     | sum of square deviations: 75347755778.76907
[2026-02-01 04:49:16] 2026-02-01 07:16:33,181 | INFO     | sum of deviations: -99314836499.30765
[2026-02-01 04:49:16] 2026-02-01 07:16:33,182 | INFO     | mean x: 1769911109.7692308
[2026-02-01 04:49:16] 2026-02-01 07:16:33,182 | INFO     | mean y: 2572880.7131410255
[2026-02-01 04:49:16] 2026-02-01 07:16:33,182 | INFO     | intersect: 2335468275.7816806
[2026-02-01 04:49:16] 2026-02-01 07:16:33,339 | INFO     | chi2: 0.9658900340506847
[2026-02-01 04:49:16] 2026-02-01 07:16:33,339 | INFO     | current chi2=0.9658900340506847 (change=7.562002201082841 %)
[2026-02-01 04:49:16] 2026-02-01 07:16:33,340 | INFO     | left removable region: 20
[2026-02-01 04:49:16] 2026-02-01 07:16:33,340 | INFO     | sum of square deviations: 69698679547.76305
[2026-02-01 04:49:16] 2026-02-01 07:16:33,673 | INFO     | sum of deviations: -51617453677.526375
[2026-02-01 04:49:16] 2026-02-01 07:16:34,123 | INFO     | mean x: 1769911231.7697368
[2026-02-01 04:49:16] 2026-02-01 07:16:34,124 | INFO     | mean y: 2576108.960526316
[2026-02-01 04:49:16] 2026-02-01 07:16:34,124 | INFO     | intersect: 1313337110.632044
[2026-02-01 04:49:16] 2026-02-01 07:16:34,125 | INFO     | chi2: 0.11132859530278909
[2026-02-01 04:49:16] 2026-02-01 07:16:34,125 | INFO     | current memory leak: -0.74 B/s (using 608 data points, chi2=0.11)
[2026-02-01 04:49:16] 2026-02-01 07:16:34,126 | INFO     | could have reported an average CPU frequency of 2649 MHz (25 samples)
[2026-02-01 04:49:16] 2026-02-01 07:16:34,126 | INFO     | ..............................
[2026-02-01 04:49:16] 2026-02-01 07:16:34,126 | INFO     | . Timing measurements:
[2026-02-01 04:49:16] 2026-02-01 07:16:34,126 | INFO     | . get job = 0 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,127 | INFO     | . initial setup = 46 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,127 | INFO     | . payload setup = 41 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,127 | INFO     | . stage-in = 0 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,127 | INFO     | . payload execution = 38698 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,184 | INFO     | . stage-out = 14 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,185 | INFO     | . log creation = 1 s
[2026-02-01 04:49:16] 2026-02-01 07:16:34,185 | INFO     | ..............................
[2026-02-01 04:49:16] 2026-02-01 07:16:36,218 | INFO     | 
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | job summary report
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | --------------------------------------------------
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | PanDA job id: 6994680106
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | task id: 48310589
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | errors: (none)
[2026-02-01 04:49:16] 2026-02-01 07:16:36,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | pilot state: finished 
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | transexitcode: 0
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | exeerrorcode: 0
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | exeerrordiag: 
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | exitcode: 0
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | exitmsg: OK
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | cpuconsumptiontime: 53480 s
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | nevents: 400
[2026-02-01 04:49:16] 2026-02-01 07:16:36,220 | INFO     | neventsw: 0
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | pid: 3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | pgrp: 3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | corecount: 9
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | event service: False
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | sizes: {0: 2277190, 1: 2277791, 2: 2277875, 3: 2277931, 4: 2277931, 5: 2278548, 38750: 2319004, 38753: 2319003, 38769: 2328057, 38773: 2328113, 38780: 2328371}
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | --------------------------------------------------
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | 
[2026-02-01 04:49:16] 2026-02-01 07:16:36,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-01 04:49:16] 2026-02-01 07:16:36,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,619 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,619 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,619 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,621 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 04:49:16] 2026-02-01 07:16:36,622 | INFO     | job 6994680106 has completed (purged errors)
[2026-02-01 04:49:16] 2026-02-01 07:16:36,622 | INFO     | overall cleanup function is called
[2026-02-01 04:49:16] 2026-02-01 07:16:37,753 | INFO     | --- collectZombieJob: --- 10, [3063682]
[2026-02-01 04:49:16] 2026-02-01 07:16:37,754 | INFO     | zombie collector waiting for pid 3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:37,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 04:49:16] 2026-02-01 07:16:37,754 | INFO     | collected zombie processes
[2026-02-01 04:49:16] 2026-02-01 07:16:37,754 | INFO     | will attempt to kill all subprocesses of pid=3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:46,882 | INFO     | PID=3054859 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 04:49:16] 2026-02-01 07:16:46,882 | INFO     | .. there are 54 such processes running
[2026-02-01 04:49:16] 2026-02-01 07:16:52,423 | INFO     | process IDs to be killed: [3063682] (in reverse order)
[2026-02-01 04:49:16] 2026-02-01 07:16:54,281 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 04:49:16] 2026-02-01 07:16:54,281 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 04:49:16] 2026-02-01 07:16:54,328 | INFO     | did not find any defunct processes belonging to 3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:54,366 | INFO     | did not find any defunct processes belonging to 3063682
[2026-02-01 04:49:16] 2026-02-01 07:16:54,366 | INFO     | ready for new job
[2026-02-01 04:49:16] 2026-02-01 07:16:54,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 04:49:16] 2026-02-01 07:16:54,375 | INFO     | **************************************
[2026-02-01 04:49:16] 2026-02-01 07:16:54,375 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 04:49:16] 2026-02-01 07:16:54,375 | INFO     | **************************************
[2026-02-01 04:49:16] 2026-02-01 07:16:54,375 | INFO     | 
[2026-02-01 04:49:16] 2026-02-01 07:16:54,382 | INFO     | architecture information:
[2026-02-01 04:49:16] 2026-02-01 07:16:54,386 | INFO     | executing command: cat /etc/os-release
[2026-02-01 04:49:16] 2026-02-01 07:16:54,498 | INFO     | cat /etc/os-release:
[2026-02-01 04:49:16] NAME="CentOS Linux"
[2026-02-01 04:49:16] VERSION="7 (Core)"
[2026-02-01 04:49:16] ID="centos"
[2026-02-01 04:49:16] ID_LIKE="rhel fedora"
[2026-02-01 04:49:16] VERSION_ID="7"
[2026-02-01 04:49:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 04:49:16] ANSI_COLOR="0;31"
[2026-02-01 04:49:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 04:49:16] HOME_URL="https://www.centos.org/"
[2026-02-01 04:49:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 04:49:16] 
[2026-02-01 04:49:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 04:49:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 04:49:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 04:49:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 04:49:16] 
[2026-02-01 04:49:16] 2026-02-01 07:16:54,499 | INFO     | **************************************
[2026-02-01 04:49:16] 2026-02-01 07:16:55,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-01 04:49:16] 2026-02-01 07:16:55,149 | INFO     | sufficient remaining disk space (70650953728 B)
[2026-02-01 04:49:16] 2026-02-01 07:16:55,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 04:49:16] 2026-02-01 07:16:55,149 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 04:49:16] 2026-02-01 07:16:55,150 | INFO     | update_server=False
[2026-02-01 04:49:16] 2026-02-01 07:16:55,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 04:49:16] 2026-02-01 07:16:55,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 04:49:16] 2026-02-01 07:16:55,159 | INFO     | aborting loop
[2026-02-01 04:49:16] 2026-02-01 07:16:55,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 04:49:16] 2026-02-01 07:16:55,371 | INFO     | all payload control threads have been joined
[2026-02-01 04:49:16] 2026-02-01 07:16:55,427 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 04:49:16] 2026-02-01 07:16:55,436 | INFO     | all job control threads have been joined
[2026-02-01 04:49:16] 2026-02-01 07:16:55,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 04:49:16] 2026-02-01 07:16:55,543 | INFO     | all data control threads have been joined
[2026-02-01 04:49:16] 2026-02-01 07:16:56,157 | INFO     | [job] retrieve thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,164 | INFO     | [job] job monitor thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,181 | INFO     | [job] queue monitor thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,197 | INFO     | [payload] failed_post thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,407 | INFO     | [payload] control thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,408 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,408 | INFO     | [data] copytool_in thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,442 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,443 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,448 | INFO     | [job] control thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:56,556 | INFO     | [data] control thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:57,062 | INFO     | [payload] validate_post thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:57,437 | INFO     | [data] copytool_out thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:57,497 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:57,545 | INFO     | [job] validate thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:16:59,503 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 04:49:16] 2026-02-01 07:17:29,575 | INFO     | [monitor] cgroup control has ended
[2026-02-01 04:49:16] 2026-02-01 07:17:29,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417783420736)>', '<ExcThread(monitor, started 140417278392064)>']
[2026-02-01 04:49:16] 2026-02-01 07:17:32,206 | INFO     | PID=3054859 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 04:49:16] 2026-02-01 07:17:32,206 | INFO     | .. there are 54 such processes running
[2026-02-01 04:49:16] 2026-02-01 07:17:32,207 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 04:49:16] 2026-02-01 07:17:32,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 04:49:16] 2026-02-01 07:17:32,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 04:49:16] 2026-02-01 07:17:32,244 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 04:49:16] 2026-02-01 07:17:32,244 | INFO     | [monitor] control thread has ended
[2026-02-01 04:49:16] 2026-02-01 07:17:34,925 | INFO     | all workflow threads have been joined
[2026-02-01 04:49:16] 2026-02-01 07:17:34,926 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 04:49:16] 2026-02-01 07:17:34,926 | INFO     | traces error code: 0
[2026-02-01 04:49:16] 2026-02-01 07:17:34,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 04:49:16] 2026-02-01 07:17:43,717 [wrapper] ==== pilot stdout END ====
[2026-02-01 04:49:16] 2026-02-01 07:17:43,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 04:49:16] 2026-02-01 07:17:43,812 [wrapper] pilotpid: 3054859
[2026-02-01 04:49:16] 2026-02-01 07:17:43,857 [wrapper] Pilot exit status: 0
[2026-02-01 04:49:16] 2026-02-01 07:17:44,478 [wrapper] pandaids: 6994680106
[2026-02-01 04:49:16] 2026-02-01 07:17:45,280 [wrapper] cleanup supervisor_pilot 1825527 3054860
[2026-02-01 04:49:16] 2026-02-01 07:17:45,326 [wrapper] Test setup, not cleaning
[2026-02-01 04:49:16] 2026-02-01 07:17:45,347 [wrapper] apfmon messages muted
[2026-02-01 04:49:16] 2026-02-01 07:17:45,368 [wrapper] ==== wrapper stdout END ====
[2026-02-01 04:49:16] 2026-02-01 07:17:45,398 [wrapper] ==== wrapper stderr END ====
[2026-02-01 04:49:16]  *** Error codes and diagnostics ***
[2026-02-01 04:49:16]     "exeErrorCode": 0,
[2026-02-01 04:49:16]     "exeErrorDiag": "",
[2026-02-01 04:49:16]     "pilotErrorCode": 0,
[2026-02-01 04:49:16]     "pilotErrorDiag": "",
[2026-02-01 04:49:16]  *** Listing of results directory ***
[2026-02-01 04:49:16] total 675468
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 08:56 pilot3.tar.gz
[2026-02-01 04:49:16] -rwx------. 1 boincer umatlas     36322 Jan 31 09:00 runpilot2-wrapper.sh
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 09:04 queuedata.json
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas       100 Jan 31 15:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 04:49:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 31 15:27 run_atlas
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas       105 Jan 31 15:27 job.xml
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas 492955153 Jan 31 15:27 EVNT.48310585._000159.pool.root.1
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 15:27 start_atlas.sh
[2026-02-01 04:49:16] drwxrwx--x. 2 boincer umatlas      4096 Jan 31 15:27 shared
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas    597766 Jan 31 15:27 input.tar.gz
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas         0 Jan 31 15:27 boinc_lockfile
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas      2530 Jan 31 15:27 pandaJob.out
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas        57 Jan 31 15:27 setup.sh.local
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas   1010528 Jan 31 15:29 agis_schedconf.cvmfs.json
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas       440 Jan 31 15:30 workernode_map.json
[2026-02-01 04:49:16] drwx------. 5 boincer umatlas      4096 Jan 31 15:30 pilot3
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas 185404481 Feb  1 02:13 HITS.48310589._008315.pool.root.1
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas       531 Feb  1 02:14 boinc_task_state.xml
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas      1045 Feb  1 02:15 memory_monitor_summary.json
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas   1511668 Feb  1 02:16 agis_ddmendpoints.agis.ALL.json
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas    733161 Feb  1 02:16 log.48310589._008315.job.log.tgz.1
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas      6385 Feb  1 02:16 heartbeat.json
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas        95 Feb  1 02:17 pilot_heartbeat.json
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas      4820 Feb  1 02:17 pilotlog.txt
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas   3959312 Feb  1 02:17 log.48310589._008315.job.log.1
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas       357 Feb  1 02:17 output.list
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas       620 Feb  1 02:17 runtime_log
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas   4710400 Feb  1 02:17 result.tar.gz
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas      9332 Feb  1 02:17 runtime_log.err
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas       656 Feb  1 02:17 h09MDmJhQ68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm59NKDmSdD8fn.diag
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas      6613 Feb  1 04:49 init_data.xml
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas      8192 Feb  1 04:49 boinc_mmap_file
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas        28 Feb  1 04:49 wrapper_checkpoint.txt
[2026-02-01 04:49:16] -rw-r--r--. 1 boincer umatlas     15221 Feb  1 04:49 stderr.txt
[2026-02-01 04:49:16] HITS file was successfully produced:
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas 185404481 Feb  1 02:13 shared/HITS.pool.root.1
[2026-02-01 04:49:16]  *** Contents of shared directory: ***
[2026-02-01 04:49:16] total 667672
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas 492955153 Jan 31 15:27 ATLAS.root_0
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 15:27 start_atlas.sh
[2026-02-01 04:49:16] -rw-r--r--. 2 boincer umatlas    597766 Jan 31 15:27 input.tar.gz
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas 185404481 Feb  1 02:13 HITS.pool.root.1
[2026-02-01 04:49:16] -rw-------. 1 boincer umatlas   4710400 Feb  1 02:17 result.tar.gz
04:49:18 (3046935): run_atlas exited; CPU time 55455.261664
04:49:18 (3046935): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN