Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:28:25 (16165): wrapper (7.7.26015): starting
15:28:25 (16165): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 15:28:25] Arguments: --nthreads 12
[2026-01-31 15:28:25] Threads: 12
[2026-01-31 15:28:25] Checking for CVMFS
[2026-01-31 15:28:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 15:28:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 15:28:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 15:28:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 15:28:25] 2.11.2.0 2913 383202 97040 155726 2 50 13580953 20275200 1 130560 1 164286102 99.944 23807298 16602 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-31 15:28:25] CVMFS is ok
[2026-01-31 15:28:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 15:28:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 15:28:25] Further information can be found at the LHC@home message board.
[2026-01-31 15:28:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 15:28:25] Checking for apptainer binary...
[2026-01-31 15:28:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 15:28:25] Running /usr/bin/apptainer --version
[2026-01-31 15:28:25] apptainer version 1.3.2-1.el7
[2026-01-31 15:28:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 15:28:27] c-205-6.aglt2.org
[2026-01-31 15:28:27] apptainer works
[2026-01-31 15:28:27] Set ATHENA_PROC_NUMBER=12
[2026-01-31 15:28:27] Set ATHENA_CORE_NUMBER=12
[2026-01-31 15:28:27] Starting ATLAS job with PandaID=6994680859
[2026-01-31 15:28:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 16:33:58]  *** The last 200 lines of the pilot log: ***
[2026-01-31 16:33:58]  filetype=log
[2026-01-31 16:33:58]  guid=5bb4a0c6-c977-470b-87d5-ccec415ae85c
[2026-01-31 16:33:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-31 16:33:58]  is_altstaged=None
[2026-01-31 16:33:58]  is_tar=False
[2026-01-31 16:33:58]  lfn=log.48310589._008754.job.log.tgz.1
[2026-01-31 16:33:58]  mtime=0
[2026-01-31 16:33:58]  protocol_id=None
[2026-01-31 16:33:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-31 16:33:58]  replicas=None
[2026-01-31 16:33:58]  scope=mc23_13p6TeV
[2026-01-31 16:33:58]  status=None
[2026-01-31 16:33:58]  status_code=0
[2026-01-31 16:33:58]  storage_token=
[2026-01-31 16:33:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6994680859/log.48310589._008754.job.log.tgz.1
[2026-01-31 16:33:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/9b/log.48310589._008754.job.log.tgz.1
[2026-01-31 16:33:58]  workdir=None
[2026-01-31 16:33:58] ]
[2026-01-31 16:33:58] 2026-01-31 21:33:17,405 | INFO     | transferring file log.48310589._008754.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6994680859/log.48310589._008754.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-31 16:33:58] 2026-01-31 21:33:17,406 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6994680859/log.48310589._008754.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310589._008754.job
[2026-01-31 16:33:58] 2026-01-31 21:33:17,428 | INFO     | adding to output.list: log.48310589._008754.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/9b/log.48310589._008754.job.log.tg
[2026-01-31 16:33:58] 2026-01-31 21:33:17,429 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-31 16:33:58] 2026-01-31 21:33:17,429 | INFO     | summary of transferred files:
[2026-01-31 16:33:58] 2026-01-31 21:33:17,429 | INFO     |  -- lfn=log.48310589._008754.job.log.tgz.1, status_code=0, status=transferred
[2026-01-31 16:33:58] 2026-01-31 21:33:17,430 | INFO     | stage-out finished correctly
[2026-01-31 16:33:58] 2026-01-31 21:33:17,614 | INFO     | monitor loop #295: job 0:6994680859 is in state 'finished'
[2026-01-31 16:33:58] 2026-01-31 21:33:17,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-31 16:33:58] 2026-01-31 21:33:18,191 | INFO     | time since job start (3871s) is within the limit (349056.0s)
[2026-01-31 16:33:58] 2026-01-31 21:33:19,317 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-31 16:33:58] 2026-01-31 21:33:20,118 | INFO     | monitor loop #296: job 0:6994680859 is in state 'finished'
[2026-01-31 16:33:58] 2026-01-31 21:33:20,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,199 | INFO     | time since job start (3873s) is within the limit (349056.0s)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,843 | INFO     | job 6994680859 has state=finished
[2026-01-31 16:33:58] 2026-01-31 21:33:20,843 | INFO     | preparing for final server update for job 6994680859 in state='finished'
[2026-01-31 16:33:58] 2026-01-31 21:33:20,844 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6994680859/jobReport.json
[2026-01-31 16:33:58] 2026-01-31 21:33:20,848 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-31 16:33:58] 2026-01-31 21:33:20,849 | INFO     | this job has now completed (state=finished)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,849 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,849 | INFO     | log transfer has been attempted: DONE
[2026-01-31 16:33:58] 2026-01-31 21:33:20,849 | INFO     | job 6994680859 has finished - writing final server update
[2026-01-31 16:33:58] 2026-01-31 21:33:20,850 | INFO     | total number of processed events: 400 (read)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994680859/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,853 | INFO     | extracted standard info from prmon json
[2026-01-31 16:33:58] 2026-01-31 21:33:20,853 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 16:33:58] 2026-01-31 21:33:20,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 16:33:58] 2026-01-31 21:33:20,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 16:33:58] 2026-01-31 21:33:20,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 16:33:58] 2026-01-31 21:33:20,856 | INFO     | fitting pss+swap vs Time
[2026-01-31 16:33:58] 2026-01-31 21:33:20,856 | INFO     | sum of square deviations: 54438230.0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,856 | INFO     | sum of deviations: -4541227594.0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,856 | INFO     | mean x: 1769893333.5
[2026-01-31 16:33:58] 2026-01-31 21:33:20,857 | INFO     | mean y: 2881485.9285714286
[2026-01-31 16:33:58] 2026-01-31 21:33:20,857 | INFO     | intersect: 147647072792.78854
[2026-01-31 16:33:58] 2026-01-31 21:33:20,857 | INFO     | chi2: 0.05688157428311352
[2026-01-31 16:33:58] 2026-01-31 21:33:20,857 | INFO     | current memory leak: -83.42 B/s (using 56 data points, chi2=0.06)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,857 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | ..............................
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . Timing measurements:
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . get job = 0 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . initial setup = 7 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . payload setup = 7 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . stage-in = 0 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . payload execution = 3846 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,858 | INFO     | . stage-out = 0 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,859 | INFO     | . log creation = 0 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,859 | INFO     | ..............................
[2026-01-31 16:33:58] 2026-01-31 21:33:20,937 | INFO     | 
[2026-01-31 16:33:58] 2026-01-31 21:33:20,938 | INFO     | job summary report
[2026-01-31 16:33:58] 2026-01-31 21:33:20,938 | INFO     | --------------------------------------------------
[2026-01-31 16:33:58] 2026-01-31 21:33:20,938 | INFO     | PanDA job id: 6994680859
[2026-01-31 16:33:58] 2026-01-31 21:33:20,938 | INFO     | task id: 48310589
[2026-01-31 16:33:58] 2026-01-31 21:33:20,938 | INFO     | errors: (none)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | pilot state: finished 
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | transexitcode: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | exeerrorcode: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | exeerrordiag: 
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | exitcode: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,939 | INFO     | exitmsg: OK
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | cpuconsumptiontime: 41842 s
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | nevents: 400
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | neventsw: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | pid: 24582
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | pgrp: 24582
[2026-01-31 16:33:58] 2026-01-31 21:33:20,940 | INFO     | corecount: 12
[2026-01-31 16:33:58] 2026-01-31 21:33:20,941 | INFO     | event service: False
[2026-01-31 16:33:58] 2026-01-31 21:33:20,941 | INFO     | sizes: {0: 2278071, 1: 2278277, 11: 2278305, 3857: 2304085, 3859: 2313083, 3860: 2313139, 3862: 2313461}
[2026-01-31 16:33:58] 2026-01-31 21:33:20,941 | INFO     | --------------------------------------------------
[2026-01-31 16:33:58] 2026-01-31 21:33:20,941 | INFO     | 
[2026-01-31 16:33:58] 2026-01-31 21:33:20,941 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-31 16:33:58] 2026-01-31 21:33:20,966 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,967 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,967 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,970 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,970 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 16:33:58] 2026-01-31 21:33:20,970 | INFO     | job 6994680859 has completed (purged errors)
[2026-01-31 16:33:58] 2026-01-31 21:33:20,970 | INFO     | overall cleanup function is called
[2026-01-31 16:33:58] 2026-01-31 21:33:21,978 | INFO     | --- collectZombieJob: --- 10, [24582]
[2026-01-31 16:33:58] 2026-01-31 21:33:21,978 | INFO     | zombie collector waiting for pid 24582
[2026-01-31 16:33:58] 2026-01-31 21:33:21,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 16:33:58] 2026-01-31 21:33:21,979 | INFO     | collected zombie processes
[2026-01-31 16:33:58] 2026-01-31 21:33:21,979 | INFO     | will attempt to kill all subprocesses of pid=24582
[2026-01-31 16:33:58] 2026-01-31 21:33:22,068 | INFO     | process IDs to be killed: [24582] (in reverse order)
[2026-01-31 16:33:58] 2026-01-31 21:33:22,120 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 16:33:58] 2026-01-31 21:33:22,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 16:33:58] 2026-01-31 21:33:22,123 | INFO     | did not find any defunct processes belonging to 24582
[2026-01-31 16:33:58] 2026-01-31 21:33:22,126 | INFO     | did not find any defunct processes belonging to 24582
[2026-01-31 16:33:58] 2026-01-31 21:33:22,126 | INFO     | ready for new job
[2026-01-31 16:33:58] 2026-01-31 21:33:22,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 16:33:58] 2026-01-31 21:33:22,128 | INFO     | **************************************
[2026-01-31 16:33:58] 2026-01-31 21:33:22,128 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 16:33:58] 2026-01-31 21:33:22,128 | INFO     | **************************************
[2026-01-31 16:33:58] 2026-01-31 21:33:22,129 | INFO     | 
[2026-01-31 16:33:58] 2026-01-31 21:33:22,129 | INFO     | architecture information:
[2026-01-31 16:33:58] 2026-01-31 21:33:22,130 | INFO     | executing command: cat /etc/os-release
[2026-01-31 16:33:58] 2026-01-31 21:33:22,144 | INFO     | cat /etc/os-release:
[2026-01-31 16:33:58] NAME="CentOS Linux"
[2026-01-31 16:33:58] VERSION="7 (Core)"
[2026-01-31 16:33:58] ID="centos"
[2026-01-31 16:33:58] ID_LIKE="rhel fedora"
[2026-01-31 16:33:58] VERSION_ID="7"
[2026-01-31 16:33:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 16:33:58] ANSI_COLOR="0;31"
[2026-01-31 16:33:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 16:33:58] HOME_URL="https://www.centos.org/"
[2026-01-31 16:33:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 16:33:58] 
[2026-01-31 16:33:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 16:33:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 16:33:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 16:33:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 16:33:58] 
[2026-01-31 16:33:58] 2026-01-31 21:33:22,144 | INFO     | **************************************
[2026-01-31 16:33:58] 2026-01-31 21:33:22,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-31 16:33:58] 2026-01-31 21:33:22,663 | INFO     | sufficient remaining disk space (28813819904 B)
[2026-01-31 16:33:58] 2026-01-31 21:33:22,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 16:33:58] 2026-01-31 21:33:22,664 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 16:33:58] 2026-01-31 21:33:22,664 | INFO     | update_server=False
[2026-01-31 16:33:58] 2026-01-31 21:33:22,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 16:33:58] 2026-01-31 21:33:22,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 16:33:58] 2026-01-31 21:33:22,784 | INFO     | all payload control threads have been joined
[2026-01-31 16:33:58] 2026-01-31 21:33:23,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 16:33:58] 2026-01-31 21:33:23,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 16:33:58] 2026-01-31 21:33:23,627 | INFO     | aborting loop
[2026-01-31 16:33:58] 2026-01-31 21:33:23,651 | INFO     | all job control threads have been joined
[2026-01-31 16:33:58] 2026-01-31 21:33:23,670 | INFO     | [job] retrieve thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:23,670 | INFO     | [job] queue monitor thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:23,730 | INFO     | [payload] validate_post thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:23,751 | INFO     | all data control threads have been joined
[2026-01-31 16:33:58] 2026-01-31 21:33:23,763 | INFO     | [data] copytool_in thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:23,789 | INFO     | [payload] control thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:23,911 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,112 | INFO     | [payload] failed_post thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,632 | INFO     | [job] job monitor thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,657 | INFO     | [job] control thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,672 | INFO     | [job] validate thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,756 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,756 | INFO     | [data] control thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:24,795 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:25,026 | INFO     | [data] copytool_out thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:25,102 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:25,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 16:33:58] 2026-01-31 21:33:29,421 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 16:33:58] 2026-01-31 21:33:53,358 | INFO     | [monitor] cgroup control has ended
[2026-01-31 16:33:58] 2026-01-31 21:33:53,399 | INFO     | PID=20139 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 16:33:58] 2026-01-31 21:33:53,399 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 16:33:58] 2026-01-31 21:33:53,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 16:33:58] 2026-01-31 21:33:53,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 16:33:58] 2026-01-31 21:33:53,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316423808832)>', '<ExcThread(monitor, started 140315742680832)>']
[2026-01-31 16:33:58] 2026-01-31 21:33:54,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 16:33:58] 2026-01-31 21:33:54,405 | INFO     | [monitor] control thread has ended
[2026-01-31 16:33:58] 2026-01-31 21:33:58,614 | INFO     | all workflow threads have been joined
[2026-01-31 16:33:58] 2026-01-31 21:33:58,614 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 16:33:58] 2026-01-31 21:33:58,614 | INFO     | traces error code: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:58,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 16:33:58] 2026-01-31 21:33:58,700 [wrapper] ==== pilot stdout END ====
[2026-01-31 16:33:58] 2026-01-31 21:33:58,704 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 16:33:58] 2026-01-31 21:33:58,707 [wrapper] pilotpid: 20139
[2026-01-31 16:33:58] 2026-01-31 21:33:58,710 [wrapper] Pilot exit status: 0
[2026-01-31 16:33:58] 2026-01-31 21:33:58,725 [wrapper] pandaids: 6994680859
[2026-01-31 16:33:58] 2026-01-31 21:33:58,764 [wrapper] cleanup supervisor_pilot 10778 20140
[2026-01-31 16:33:58] 2026-01-31 21:33:58,768 [wrapper] Test setup, not cleaning
[2026-01-31 16:33:58] 2026-01-31 21:33:58,771 [wrapper] apfmon messages muted
[2026-01-31 16:33:58] 2026-01-31 21:33:58,775 [wrapper] ==== wrapper stdout END ====
[2026-01-31 16:33:58] 2026-01-31 21:33:58,779 [wrapper] ==== wrapper stderr END ====
[2026-01-31 16:33:58]  *** Error codes and diagnostics ***
[2026-01-31 16:33:58]     "exeErrorCode": 0,
[2026-01-31 16:33:58]     "exeErrorDiag": "",
[2026-01-31 16:33:58]     "pilotErrorCode": 0,
[2026-01-31 16:33:58]     "pilotErrorDiag": "",
[2026-01-31 16:33:58]  *** Listing of results directory ***
[2026-01-31 16:33:58] total 661108
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas    584422 Jan 31 08:56 pilot3.tar.gz
[2026-01-31 16:33:58] -rwx------ 1 boincer umatlas     36322 Jan 31 09:00 runpilot2-wrapper.sh
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas      5111 Jan 31 09:02 queuedata.json
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas       100 Jan 31 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 16:33:58] -rwxr-xr-x 1 boincer umatlas      7986 Jan 31 15:28 run_atlas
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas       105 Jan 31 15:28 job.xml
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas 489084079 Jan 31 15:28 EVNT.48310585._000168.pool.root.1
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 15:28 start_atlas.sh
[2026-01-31 16:33:58] drwxrwx--x 2 boincer umatlas      4096 Jan 31 15:28 shared
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas    597754 Jan 31 15:28 input.tar.gz
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas         0 Jan 31 15:28 boinc_lockfile
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas      2528 Jan 31 15:28 pandaJob.out
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas        57 Jan 31 15:28 setup.sh.local
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas   1010528 Jan 31 15:28 agis_schedconf.cvmfs.json
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas   1511668 Jan 31 15:28 agis_ddmendpoints.agis.ALL.json
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas       444 Jan 31 15:28 workernode_map.json
[2026-01-31 16:33:58] drwx------ 5 boincer umatlas      4096 Jan 31 15:28 pilot3
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas      5952 Jan 31 16:27 init_data.xml
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas 182045830 Jan 31 16:32 HITS.48310589._008754.pool.root.1
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas       530 Jan 31 16:33 boinc_task_state.xml
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas      1044 Jan 31 16:33 memory_monitor_summary.json
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas    379740 Jan 31 16:33 log.48310589._008754.job.log.tgz.1
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas      6414 Jan 31 16:33 heartbeat.json
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas        27 Jan 31 16:33 wrapper_checkpoint.txt
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas      8192 Jan 31 16:33 boinc_mmap_file
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas        95 Jan 31 16:33 pilot_heartbeat.json
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas      4742 Jan 31 16:33 pilotlog.txt
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas    572448 Jan 31 16:33 log.48310589._008754.job.log.1
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas       357 Jan 31 16:33 output.list
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas       620 Jan 31 16:33 runtime_log
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas    972800 Jan 31 16:33 result.tar.gz
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas      9338 Jan 31 16:33 runtime_log.err
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas       658 Jan 31 16:33 2D0LDmKhQ68n9Rq4apOajLDm4fhM0noT9bVooX4SDmhpNKDmtN31Jn.diag
[2026-01-31 16:33:58] -rw-r--r-- 1 boincer umatlas     21317 Jan 31 16:33 stderr.txt
[2026-01-31 16:33:58] HITS file was successfully produced:
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas 182045830 Jan 31 16:32 shared/HITS.pool.root.1
[2026-01-31 16:33:58]  *** Contents of shared directory: ***
[2026-01-31 16:33:58] total 656956
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas 489084079 Jan 31 15:28 ATLAS.root_0
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 15:28 start_atlas.sh
[2026-01-31 16:33:58] -rw-r--r-- 2 boincer umatlas    597754 Jan 31 15:28 input.tar.gz
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas 182045830 Jan 31 16:32 HITS.pool.root.1
[2026-01-31 16:33:58] -rw------- 1 boincer umatlas    972800 Jan 31 16:33 result.tar.gz
16:34:00 (16165): run_atlas exited; CPU time 41824.970755
16:34:00 (16165): called boinc_finish(0)

</stderr_txt>
]]>

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