Stderr output

<core_client_version>7.14.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 03:45:57 (647180): vboxwrapper version 26210
2026-02-03 03:45:57 (647180): BOINC client version: 7.14.2
2026-02-03 03:45:58 (647180): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2026-02-03 03:45:58 (647180): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 03:45:58 (647180): Create VM. (boinc_e1d7e9b17d4c25b7, slot#1)
2026-02-03 03:45:59 (647180): Setting Memory Size for VM. (4200MB)
2026-02-03 03:45:59 (647180): Setting CPU Count for VM. (2)
2026-02-03 03:45:59 (647180): Setting Chipset Options for VM.
2026-02-03 03:45:59 (647180): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 03:46:00 (647180): Setting Boot Options for VM.
2026-02-03 03:46:00 (647180): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 03:46:00 (647180): Enabling VM Network Access.
2026-02-03 03:46:01 (647180): Disabling USB Support for VM.
2026-02-03 03:46:01 (647180): Disabling COM Port Support for VM.
2026-02-03 03:46:01 (647180): Disabling LPT Port Support for VM.
2026-02-03 03:46:02 (647180): Disabling Audio Support for VM.
2026-02-03 03:46:02 (647180): Disabling Clipboard Support for VM.
2026-02-03 03:46:02 (647180): Disabling Drag and Drop Support for VM.
2026-02-03 03:46:02 (647180): Adding storage controller(s) to VM.
2026-02-03 03:46:03 (647180): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 03:46:03 (647180): Adding VirtualBox Guest Additions to VM.
2026-02-03 03:46:03 (647180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 03:46:04 (647180): forwarding host port 58870 to guest port 80
2026-02-03 03:46:04 (647180): Enabling remote desktop for VM.
2026-02-03 03:46:04 (647180): Enabling shared directory for VM.
2026-02-03 03:46:05 (647180): Starting VM using VBoxManage interface. (boinc_e1d7e9b17d4c25b7, slot#1)
2026-02-03 03:46:12 (647180): Successfully started VM. (PID = '665756')
2026-02-03 03:46:12 (647180): Reporting VM Process ID to BOINC.
2026-02-03 03:46:12 (647180): Guest Log: BIOS: VirtualBox 6.1.40
2026-02-03 03:46:12 (647180): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 03:46:12 (647180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 03:46:12 (647180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 03:46:12 (647180): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 03:46:12 (647180): Detected: Web Application Enabled (http://localhost:58870)
2026-02-03 03:46:12 (647180): Detected: Remote Desktop Enabled (localhost:58871)
2026-02-03 03:46:12 (647180): Preference change detected
2026-02-03 03:46:12 (647180): Setting CPU throttle for VM. (100%)
2026-02-03 03:46:12 (647180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 03:46:14 (647180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 03:46:14 (647180): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 03:46:17 (647180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 03:46:17 (647180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 03:46:17 (647180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 03:46:25 (647180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 03:46:25 (647180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-03 03:46:36 (647180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000487 main     Log opened 2026-02-03T03:46:33.904696000Z
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000663 main     OS Product: Linux
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000735 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000790 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000832 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000833 main     Process ID: 1271
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.000834 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 03:46:36 (647180): Guest Log: 00:00:00.003587 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 03:46:36 (647180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 03:46:36 (647180): Guest Log: [INFO] Mounting shared directory
2026-02-03 03:46:36 (647180): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 03:46:40 (647180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 03:46:40 (647180): Guest Log: [INFO] Detected branch: prod
2026-02-03 03:46:40 (647180): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 03:46:40 (647180): Guest Log: Copying input files
2026-02-03 03:46:46 (647180): Guest Log: 00:00:10.014142 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 357 384 000ns (GuestNow=1 770 108 405 274 854 000 ns GuestLast=1 770 090 393 917 470 000 ns fSetTimeLastLoop=true )
2026-02-03 03:46:53 (647180): Guest Log: Copied input files into RunAtlas.
2026-02-03 03:46:53 (647180): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-03 03:46:53 (647180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-03 03:46:53 (647180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-03 03:46:53 (647180): Guest Log: Further information can be found at the LHC@home message board.
2026-02-03 03:47:06 (647180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-03 03:47:06 (647180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-03 03:47:06 (647180): Guest Log: 2.6.3.0 1547 0 30084 155823 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-03 03:47:08 (647180): Guest Log: copied the webapp to /var/www
2026-02-03 03:47:08 (647180): Guest Log: ATHENA_PROC_NUMBER=2
2026-02-03 03:47:08 (647180): Guest Log: ATHENA_CORE_NUMBER=2
2026-02-03 03:47:09 (647180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-03 03:47:09 (647180): Guest Log:  *** Starting ATLAS job. (PandaID=6994680446 taskID=48310589) ***
2026-02-03 05:26:57 (647180): Status Report: Elapsed Time: '6000.000000'
2026-02-03 05:26:57 (647180): Status Report: CPU Time: '11038.546875'
2026-02-03 07:08:42 (647180): Status Report: Elapsed Time: '12000.000000'
2026-02-03 07:08:42 (647180): Status Report: CPU Time: '22736.578125'
2026-02-03 08:49:33 (647180): Status Report: Elapsed Time: '18000.000000'
2026-02-03 08:49:33 (647180): Status Report: CPU Time: '34378.468750'
2026-02-03 10:30:29 (647180): Status Report: Elapsed Time: '24000.000000'
2026-02-03 10:30:29 (647180): Status Report: CPU Time: '46047.531250'
2026-02-03 11:31:38 (647180): Guest Log:  *** Job finished ***
2026-02-03 11:31:38 (647180): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:13,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:13,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:32,246 | INFO     | [monitor] cgroup control has ended
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:32,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737252034368)>', '<ExcThread(monitor, started 139736660293376)>']
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:33,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:33,622 | INFO     | [monitor] control thread has ended
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,714 | INFO     | all workflow threads have been joined
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,714 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,714 | INFO     | traces error code: 0
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,855 [wrapper] ==== pilot stdout END ====
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,868 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,885 [wrapper] pilotpid: 5926
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,895 [wrapper] Pilot exit status: 0
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:37,981 [wrapper] pandaids: 6994680446
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:38,047 [wrapper] cleanup supervisor_pilot 32175 5927
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:38,053 [wrapper] Test setup, not cleaning
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:38,063 [wrapper] apfmon messages muted
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:38,076 [wrapper] ==== wrapper stdout END ====
2026-02-03 11:31:38 (647180): Guest Log: 2026-02-03 16:31:38,084 [wrapper] ==== wrapper stderr END ====
2026-02-03 11:31:38 (647180): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 11:31:38 (647180): Guest Log:     "exeErrorCode": 0,
2026-02-03 11:31:38 (647180): Guest Log:     "exeErrorDiag": "",
2026-02-03 11:31:38 (647180): Guest Log:     "pilotErrorCode": 0,
2026-02-03 11:31:38 (647180): Guest Log:     "pilotErrorDiag": "",
2026-02-03 11:31:38 (647180): Guest Log:  *** Listing of results directory ***
2026-02-03 11:31:38 (647180): Guest Log: total 189212
2026-02-03 11:31:38 (647180): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 31 13:56 pilot3.tar.gz
2026-02-03 11:31:38 (647180): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 31 14:00 runpilot2-wrapper.sh
2026-02-03 11:31:38 (647180): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 31 14:02 queuedata.json
2026-02-03 11:31:38 (647180): Guest Log: -rwxr-xr-x. 1 atlas atlas      9015 Feb  3 08:46 init_data.xml
2026-02-03 11:31:38 (647180): Guest Log: -rwxr-xr-x. 1 atlas atlas    597760 Feb  3 08:46 input.tar.gz
2026-02-03 11:31:38 (647180): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  3 08:46 start_atlas.sh
2026-02-03 11:31:38 (647180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 08:46 EVNT.48310585._000164.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 11:31:38 (647180): Guest Log: -rw-r--r--. 1 atlas atlas      2529 Feb  3 08:47 pandaJob.out
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas   1009324 Feb  3 08:47 agis_schedconf.cvmfs.json
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas       428 Feb  3 08:48 workernode_map.json
2026-02-03 11:31:38 (647180): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 08:48 pilot3
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas 181050697 Feb  3 16:29 HITS.48310589._008560.pool.root.1
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 16:30 pilot_heartbeat.json
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas      1027 Feb  3 16:30 memory_monitor_summary.json
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  3 16:30 agis_ddmendpoints.agis.ALL.json
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas    564338 Feb  3 16:30 log.48310589._008560.job.log.tgz.1
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas      6372 Feb  3 16:30 heartbeat.json
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas      4873 Feb  3 16:31 pilotlog.txt
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas   3852478 Feb  3 16:31 log.48310589._008560.job.log.1
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 16:31 output.list
2026-02-03 11:31:38 (647180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 16:31 runtime_log
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas   4433920 Feb  3 16:31 result.tar.gz
2026-02-03 11:31:38 (647180): Guest Log: -rw-r--r--. 1 atlas atlas      8731 Feb  3 16:31 runtime_log.err
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas       651 Feb  3 16:31 3H6KDmKhQ68n9Rq4apOajLDm4fhM0noT9bVooX4SDm8oNKDmQWw0Jo.diag
2026-02-03 11:31:38 (647180): Guest Log: Looking for outputfile HITS.48310589._008560.pool.root.1
2026-02-03 11:31:38 (647180): Guest Log: HITS file was successfully produced
2026-02-03 11:31:38 (647180): Guest Log: -rw-------. 1 atlas atlas 181050697 Feb  3 16:29 /home/atlas/RunAtlas/HITS.48310589._008560.pool.root.1
2026-02-03 11:31:40 (647180): Guest Log: Successfully finished the ATLAS job!
2026-02-03 11:31:40 (647180): Guest Log: Copying the results back to the shared directory!
2026-02-03 11:31:41 (647180): Guest Log:  *** Contents of shared directory: ***
2026-02-03 11:31:41 (647180): Guest Log: total 660004
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root 489728656 Feb  3 08:45 ATLAS.root_0
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root 181050697 Feb  3 16:31 HITS.pool.root.1
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root      9015 Feb  3 08:45 init_data.xml
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root    597760 Jan 31 20:12 input.tar.gz
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root   4433920 Feb  3 16:31 result.tar.gz
2026-02-03 11:31:41 (647180): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 31 20:13 start_atlas.sh
2026-02-03 11:31:41 (647180): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 11:31:41 (647180): VM Completion File Detected.
2026-02-03 11:31:41 (647180): Powering off VM.
2026-02-03 11:31:43 (647180): Successfully stopped VM.
2026-02-03 11:31:43 (647180): Deregistering VM. (boinc_e1d7e9b17d4c25b7, slot#1)
2026-02-03 11:31:43 (647180): Removing network bandwidth throttle group from VM.
2026-02-03 11:31:44 (647180): Removing VM from VirtualBox.
2026-02-03 11:31:49 (647180): called boinc_finish(0)

</stderr_txt>
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