Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-04 12:12:33 (5072): vboxwrapper version 26210
2026-02-04 12:12:33 (5072): BOINC client version: 8.2.8
2026-02-04 12:12:34 (5072): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2026-02-04 12:12:34 (5072): Successfully copied 'init_data.xml' to the shared directory.
2026-02-04 12:12:34 (5072): Create VM. (boinc_471e1b0473ef9138, slot#0)
2026-02-04 12:12:35 (5072): Setting Memory Size for VM. (4800MB)
2026-02-04 12:12:35 (5072): Setting CPU Count for VM. (8)
2026-02-04 12:12:35 (5072): Setting Chipset Options for VM.
2026-02-04 12:12:36 (5072): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-04 12:12:36 (5072): Setting Boot Options for VM.
2026-02-04 12:12:37 (5072): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-04 12:12:37 (5072): Enabling VM Network Access.
2026-02-04 12:12:37 (5072): Disabling USB Support for VM.
2026-02-04 12:12:38 (5072): Disabling COM Port Support for VM.
2026-02-04 12:12:38 (5072): Disabling LPT Port Support for VM.
2026-02-04 12:12:38 (5072): Disabling Audio Support for VM.
2026-02-04 12:12:38 (5072): Disabling Clipboard Support for VM.
2026-02-04 12:12:39 (5072): Disabling Drag and Drop Support for VM.
2026-02-04 12:12:39 (5072): Adding storage controller(s) to VM.
2026-02-04 12:12:39 (5072): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-04 12:12:42 (5072): Adding VirtualBox Guest Additions to VM.
2026-02-04 12:12:42 (5072): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-04 12:12:42 (5072): forwarding host port 49852 to guest port 80
2026-02-04 12:12:43 (5072): Enabling remote desktop for VM.
2026-02-04 12:12:43 (5072): Required extension pack not installed, remote desktop not enabled.
2026-02-04 12:12:43 (5072): Enabling shared directory for VM.
2026-02-04 12:12:43 (5072): Starting VM using VBoxManage interface. (boinc_471e1b0473ef9138, slot#0)
2026-02-04 12:12:49 (5072): Successfully started VM. (PID = '7904')
2026-02-04 12:12:49 (5072): Reporting VM Process ID to BOINC.
2026-02-04 12:12:49 (5072): Guest Log: BIOS: VirtualBox 7.1.12
2026-02-04 12:12:49 (5072): Guest Log: CPUID EDX: 0x178bfbff
2026-02-04 12:12:49 (5072): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-04 12:12:49 (5072): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-04 12:12:49 (5072): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-04 12:12:49 (5072): Detected: Web Application Enabled (http://localhost:49852)
2026-02-04 12:12:49 (5072): Preference change detected
2026-02-04 12:12:49 (5072): Setting CPU throttle for VM. (50%)
2026-02-04 12:12:49 (5072): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-04 12:12:51 (5072): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-04 12:12:51 (5072): Guest Log: BIOS: Booting from Hard Disk...
2026-02-04 12:12:54 (5072): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-04 12:12:54 (5072): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-04 12:12:54 (5072): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-04 12:13:02 (5072): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-04 12:13:02 (5072): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-04 12:13:08 (5072): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000130 main     Log opened 2026-02-04T12:13:06.278425000Z
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000229 main     OS Product: Linux
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000285 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000310 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000311 main     Process ID: 1378
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.000311 main     Package type: LINUX_64BITS_GENERIC
2026-02-04 12:13:08 (5072): Guest Log: 00:00:00.003002 main     5.2.32 r132073 started. Verbose level = 0
2026-02-04 12:13:08 (5072): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-04 12:13:08 (5072): Guest Log: [INFO] Mounting shared directory
2026-02-04 12:13:08 (5072): Guest Log: [INFO] Checking for init_data.xml
2026-02-04 12:13:18 (5072): Guest Log: 00:00:10.028732 timesync vgsvcTimeSyncWorker: Radical guest time change: -28 788 764 410 000ns (GuestNow=1 770 178 397 518 791 000 ns GuestLast=1 770 207 186 283 201 000 ns fSetTimeLastLoop=true )
2026-02-04 12:13:27 (5072): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-04 12:13:27 (5072): Guest Log: [INFO] Detected branch: prod
2026-02-04 12:13:28 (5072): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-04 12:13:28 (5072): Guest Log: Copying input files
2026-02-04 12:13:35 (5072): Guest Log: Copied input files into RunAtlas.
2026-02-04 12:13:35 (5072): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-04 12:13:35 (5072): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-04 12:13:35 (5072): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-04 12:13:35 (5072): Guest Log: Further information can be found at the LHC@home message board.
2026-02-04 12:13:43 (5072): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-04 12:13:43 (5072): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-04 12:13:43 (5072): Guest Log: 2.6.3.0 1657 0 30156 155853 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-04 12:13:44 (5072): Guest Log: copied the webapp to /var/www
2026-02-04 12:13:44 (5072): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-04 12:13:44 (5072): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-04 12:13:45 (5072): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-04 12:13:45 (5072): Guest Log:  *** Starting ATLAS job. (PandaID=6994681093 taskID=48310589) ***
2026-02-04 13:53:44 (5072): Status Report: Elapsed Time: '6000.000000'
2026-02-04 13:53:44 (5072): Status Report: CPU Time: '12073.171875'
2026-02-04 14:57:35 (5072): Guest Log:  *** Job finished ***
2026-02-04 14:57:35 (5072): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:14,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:14,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:26,862 | INFO     | [monitor] cgroup control has ended
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:27,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681546581824)>', '<ExcThread(monitor, started 140680932333312)>']
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:28,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:28,233 | INFO     | [monitor] control thread has ended
2026-02-04 14:57:35 (5072): Guest Log: 2026-02-04 06:57:32,379 | INFO     | all workflow threads have been joined
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,380 | INFO     | end of generic workflow (traces error code: 0)
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,380 | INFO     | traces error code: 0
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,458 [wrapper] ==== pilot stdout END ====
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,466 [wrapper] ==== wrapper stdout RESUME ====
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,473 [wrapper] pilotpid: 6125
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:32,481 [wrapper] Pilot exit status: 0
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,471 [wrapper] pandaids: 6994681093
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,518 [wrapper] cleanup supervisor_pilot 26563 6126
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,532 [wrapper] Test setup, not cleaning
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,540 [wrapper] apfmon messages muted
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,551 [wrapper] ==== wrapper stdout END ====
2026-02-04 14:57:36 (5072): Guest Log: 2026-02-04 06:57:34,558 [wrapper] ==== wrapper stderr END ====
2026-02-04 14:57:36 (5072): Guest Log:  *** Error codes and diagnostics ***
2026-02-04 14:57:36 (5072): Guest Log:     "exeErrorCode": 0,
2026-02-04 14:57:36 (5072): Guest Log:     "exeErrorDiag": "",
2026-02-04 14:57:36 (5072): Guest Log:     "pilotErrorCode": 0,
2026-02-04 14:57:36 (5072): Guest Log:     "pilotErrorDiag": "",
2026-02-04 14:57:36 (5072): Guest Log:  *** Listing of results directory ***
2026-02-04 14:57:36 (5072): Guest Log: total 182320
2026-02-04 14:57:36 (5072): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 31 13:56 pilot3.tar.gz
2026-02-04 14:57:36 (5072): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 31 13:57 runpilot2-wrapper.sh
2026-02-04 14:57:36 (5072): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 31 13:59 queuedata.json
2026-02-04 14:57:36 (5072): Guest Log: -rwxr-xr-x. 1 atlas atlas      8555 Feb  4 04:13 init_data.xml
2026-02-04 14:57:36 (5072): Guest Log: -rwxr-xr-x. 1 atlas atlas    597754 Feb  4 04:13 input.tar.gz
2026-02-04 14:57:36 (5072): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  4 04:13 start_atlas.sh
2026-02-04 14:57:36 (5072): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  4 04:13 EVNT.48310585._000172.pool.root.1 -> /data/./ATLAS.root_0
2026-02-04 14:57:36 (5072): Guest Log: -rw-r--r--. 1 atlas atlas      2528 Feb  4 04:13 pandaJob.out
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas   1009236 Feb  4 04:18 agis_schedconf.cvmfs.json
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  4 04:18 agis_ddmendpoints.agis.ALL.json
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas       409 Feb  4 04:18 workernode_map.json
2026-02-04 14:57:36 (5072): Guest Log: drwx------. 5 atlas atlas      4096 Feb  4 04:19 pilot3
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas 179425175 Feb  4 06:56 HITS.48310589._008959.pool.root.1
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas        95 Feb  4 06:56 pilot_heartbeat.json
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas      1021 Feb  4 06:56 memory_monitor_summary.json
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas    403197 Feb  4 06:56 log.48310589._008959.job.log.tgz.1
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas      6288 Feb  4 06:56 heartbeat.json
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas      4875 Feb  4 06:57 pilotlog.txt
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas   1298414 Feb  4 06:57 log.48310589._008959.job.log.1
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas       357 Feb  4 06:57 output.list
2026-02-04 14:57:36 (5072): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  4 06:57 runtime_log
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas   1720320 Feb  4 06:57 result.tar.gz
2026-02-04 14:57:36 (5072): Guest Log: -rw-r--r--. 1 atlas atlas      8735 Feb  4 06:57 runtime_log.err
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas       655 Feb  4 06:57 6B7MDmpeQ68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmN4NKDmQrjo9m.diag
2026-02-04 14:57:36 (5072): Guest Log: Looking for outputfile HITS.48310589._008959.pool.root.1
2026-02-04 14:57:36 (5072): Guest Log: HITS file was successfully produced
2026-02-04 14:57:36 (5072): Guest Log: -rw-------. 1 atlas atlas 179425175 Feb  4 06:56 /home/atlas/RunAtlas/HITS.48310589._008959.pool.root.1
2026-02-04 14:57:37 (5072): Guest Log: Successfully finished the ATLAS job!
2026-02-04 14:57:37 (5072): Guest Log: Copying the results back to the shared directory!
2026-02-04 14:57:37 (5072): Guest Log:  *** Contents of shared directory: ***
2026-02-04 14:57:37 (5072): Guest Log: total 665692
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root 499893660 Feb  4 04:12 ATLAS.root_0
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root 179425175 Feb  4 06:57 HITS.pool.root.1
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root      8555 Feb  4 04:12 init_data.xml
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root    597754 Jan 31 19:44 input.tar.gz
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root   1720320 Feb  4 06:57 result.tar.gz
2026-02-04 14:57:37 (5072): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 31 19:44 start_atlas.sh
2026-02-04 14:57:37 (5072): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-04 14:57:37 (5072): VM Completion File Detected.
2026-02-04 14:57:37 (5072): Powering off VM.
2026-02-04 14:57:38 (5072): Successfully stopped VM.
2026-02-04 14:57:38 (5072): Deregistering VM. (boinc_471e1b0473ef9138, slot#0)
2026-02-04 14:57:38 (5072): Removing network bandwidth throttle group from VM.
2026-02-04 14:57:39 (5072): Removing VM from VirtualBox.
2026-02-04 14:57:44 (5072): called boinc_finish(0)

</stderr_txt>
]]>

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