Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:11:06 (29697): wrapper (7.7.26015): starting
13:11:06 (29697): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 13:11:06] Arguments: --nthreads 8
[2026-01-31 13:11:06] Threads: 8
[2026-01-31 13:11:06] Checking for CVMFS
[2026-01-31 13:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 13:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 13:11:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 13:11:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 13:11:06] 2.11.2.0 2991 63493 88736 155722 2 52 14360668 20275200 1 130560 0 15406941 99.811 4519569 29621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-31 13:11:06] CVMFS is ok
[2026-01-31 13:11:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 13:11:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 13:11:07] Further information can be found at the LHC@home message board.
[2026-01-31 13:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 13:11:07] Checking for apptainer binary...
[2026-01-31 13:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 13:11:07] Running /usr/bin/apptainer --version
[2026-01-31 13:11:07] apptainer version 1.3.2-1.el7
[2026-01-31 13:11:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 13:11:08] c-115-4.aglt2.org
[2026-01-31 13:11:08] apptainer works
[2026-01-31 13:11:08] Set ATHENA_PROC_NUMBER=8
[2026-01-31 13:11:08] Set ATHENA_CORE_NUMBER=8
[2026-01-31 13:11:08] Starting ATLAS job with PandaID=6994615892
[2026-01-31 13:11:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 15:39:52]  *** The last 200 lines of the pilot log: ***
[2026-01-31 15:39:52] 2026-01-31 20:38:58,205 | INFO     | this job has now completed (state=finished)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,205 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,205 | INFO     | log transfer has been attempted: DONE
[2026-01-31 15:39:52] 2026-01-31 20:38:58,206 | INFO     | job 6994615892 has finished - writing final server update
[2026-01-31 15:39:52] 2026-01-31 20:38:58,206 | INFO     | total number of processed events: 400 (read)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,208 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994615892/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,209 | INFO     | extracted standard info from prmon json
[2026-01-31 15:39:52] 2026-01-31 20:38:58,209 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 15:39:52] 2026-01-31 20:38:58,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 15:39:52] 2026-01-31 20:38:58,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 15:39:52] 2026-01-31 20:38:58,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 15:39:52] 2026-01-31 20:38:58,213 | INFO     | fitting pss+swap vs Time
[2026-01-31 15:39:52] 2026-01-31 20:38:58,214 | INFO     | sum of square deviations: 945282840.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,214 | INFO     | sum of deviations: 12057470266.999994
[2026-01-31 15:39:52] 2026-01-31 20:38:58,215 | INFO     | mean x: 1769887509.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,215 | INFO     | mean y: 2521094.331034483
[2026-01-31 15:39:52] 2026-01-31 20:38:58,215 | INFO     | intersect: -22573119880.70474
[2026-01-31 15:39:52] 2026-01-31 20:38:58,215 | INFO     | chi2: 2.3947879196643296
[2026-01-31 15:39:52] 2026-01-31 20:38:58,215 | INFO     | sum of square deviations: 850825255.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,216 | INFO     | sum of deviations: 21801434190.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,216 | INFO     | mean x: 1769887356.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,216 | INFO     | mean y: 2536362.1071428573
[2026-01-31 15:39:52] 2026-01-31 20:38:58,216 | INFO     | intersect: -45348823979.6034
[2026-01-31 15:39:52] 2026-01-31 20:38:58,217 | INFO     | chi2: 1.5439983995017346
[2026-01-31 15:39:52] 2026-01-31 20:38:58,217 | INFO     | current chi2=1.5439983995017346 (change=35.52671671576862 %)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,217 | INFO     | sum of square deviations: 762879420.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | sum of deviations: 21080602894.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | mean x: 1769887204.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | mean y: 2535111.9185185186
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | intersect: -48904655640.05637
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | chi2: 1.5450539188079462
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | current chi2=1.5450539188079462 (change=-0.06836272023029585 %)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,218 | INFO     | right removable region: 134
[2026-01-31 15:39:52] 2026-01-31 20:38:58,219 | INFO     | sum of square deviations: 850825255.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,219 | INFO     | sum of deviations: -11929150331.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,219 | INFO     | mean x: 1769887661.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,220 | INFO     | mean y: 2559337.492857143
[2026-01-31 15:39:52] 2026-01-31 20:38:58,220 | INFO     | intersect: 24817591401.744976
[2026-01-31 15:39:52] 2026-01-31 20:38:58,220 | INFO     | chi2: 0.9605614137796655
[2026-01-31 15:39:52] 2026-01-31 20:38:58,220 | INFO     | current chi2=0.9605614137796655 (change=59.889499780243405 %)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,220 | INFO     | sum of square deviations: 762879420.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,221 | INFO     | sum of deviations: -16685423330.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,221 | INFO     | mean x: 1769887814.0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,221 | INFO     | mean y: 2567489.6
[2026-01-31 15:39:52] 2026-01-31 20:38:58,221 | INFO     | intersect: 38712914956.04273
[2026-01-31 15:39:52] 2026-01-31 20:38:58,222 | INFO     | chi2: 0.8927231333903791
[2026-01-31 15:39:52] 2026-01-31 20:38:58,222 | INFO     | current chi2=0.8927231333903791 (change=7.062357431405965 %)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,222 | INFO     | left removable region: 20
[2026-01-31 15:39:52] 2026-01-31 20:38:58,222 | INFO     | sum of square deviations: 459366752.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,222 | INFO     | sum of deviations: -5817393374.500001
[2026-01-31 15:39:52] 2026-01-31 20:38:58,223 | INFO     | mean x: 1769887783.5
[2026-01-31 15:39:52] 2026-01-31 20:38:58,223 | INFO     | mean y: 2585355.2192982454
[2026-01-31 15:39:52] 2026-01-31 20:38:58,223 | INFO     | intersect: 22416339527.255054
[2026-01-31 15:39:52] 2026-01-31 20:38:58,223 | INFO     | chi2: 0.009113479428446465
[2026-01-31 15:39:52] 2026-01-31 20:38:58,223 | INFO     | current memory leak: -12.66 B/s (using 114 data points, chi2=0.01)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | could have reported an average CPU frequency of 1729 MHz (8 samples)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | ..............................
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | . Timing measurements:
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | . get job = 0 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | . initial setup = 8 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | . payload setup = 8 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,224 | INFO     | . stage-in = 0 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,225 | INFO     | . payload execution = 8819 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,225 | INFO     | . stage-out = 0 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,225 | INFO     | . log creation = 0 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,225 | INFO     | ..............................
[2026-01-31 15:39:52] 2026-01-31 20:38:58,300 | INFO     | 
[2026-01-31 15:39:52] 2026-01-31 20:38:58,301 | INFO     | job summary report
[2026-01-31 15:39:52] 2026-01-31 20:38:58,303 | INFO     | --------------------------------------------------
[2026-01-31 15:39:52] 2026-01-31 20:38:58,303 | INFO     | PanDA job id: 6994615892
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | task id: 48431080
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | errors: (none)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | pilot state: finished 
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | transexitcode: 0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | exeerrorcode: 0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | exeerrordiag: 
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | exitcode: 0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,304 | INFO     | exitmsg: OK
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | cpuconsumptiontime: 65911 s
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | nevents: 400
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | neventsw: 0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | pid: 5563
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | pgrp: 5563
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | corecount: 8
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | event service: False
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | sizes: {0: 2277827, 1: 2278344, 12: 2278344, 8831: 2306489, 8832: 2315487, 8835: 2315865}
[2026-01-31 15:39:52] 2026-01-31 20:38:58,305 | INFO     | --------------------------------------------------
[2026-01-31 15:39:52] 2026-01-31 20:38:58,306 | INFO     | 
[2026-01-31 15:39:52] 2026-01-31 20:38:58,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-31 15:39:52] 2026-01-31 20:38:58,342 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,342 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,342 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,343 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,344 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,345 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,345 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,345 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 15:39:52] 2026-01-31 20:38:58,346 | INFO     | job 6994615892 has completed (purged errors)
[2026-01-31 15:39:52] 2026-01-31 20:38:58,346 | INFO     | overall cleanup function is called
[2026-01-31 15:39:52] 2026-01-31 20:38:59,355 | INFO     | --- collectZombieJob: --- 10, [5563]
[2026-01-31 15:39:52] 2026-01-31 20:38:59,355 | INFO     | zombie collector waiting for pid 5563
[2026-01-31 15:39:52] 2026-01-31 20:38:59,355 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 15:39:52] 2026-01-31 20:38:59,356 | INFO     | collected zombie processes
[2026-01-31 15:39:52] 2026-01-31 20:38:59,356 | INFO     | will attempt to kill all subprocesses of pid=5563
[2026-01-31 15:39:52] 2026-01-31 20:38:59,440 | INFO     | process IDs to be killed: [5563] (in reverse order)
[2026-01-31 15:39:52] 2026-01-31 20:38:59,502 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 15:39:52] 2026-01-31 20:38:59,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 15:39:52] 2026-01-31 20:38:59,507 | INFO     | did not find any defunct processes belonging to 5563
[2026-01-31 15:39:52] 2026-01-31 20:38:59,511 | INFO     | did not find any defunct processes belonging to 5563
[2026-01-31 15:39:52] 2026-01-31 20:38:59,511 | INFO     | ready for new job
[2026-01-31 15:39:52] 2026-01-31 20:38:59,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 15:39:52] 2026-01-31 20:38:59,513 | INFO     | **************************************
[2026-01-31 15:39:52] 2026-01-31 20:38:59,514 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 15:39:52] 2026-01-31 20:38:59,514 | INFO     | **************************************
[2026-01-31 15:39:52] 2026-01-31 20:38:59,514 | INFO     | 
[2026-01-31 15:39:52] 2026-01-31 20:38:59,514 | INFO     | architecture information:
[2026-01-31 15:39:52] 2026-01-31 20:38:59,515 | INFO     | executing command: cat /etc/os-release
[2026-01-31 15:39:52] 2026-01-31 20:38:59,533 | INFO     | cat /etc/os-release:
[2026-01-31 15:39:52] NAME="CentOS Linux"
[2026-01-31 15:39:52] VERSION="7 (Core)"
[2026-01-31 15:39:52] ID="centos"
[2026-01-31 15:39:52] ID_LIKE="rhel fedora"
[2026-01-31 15:39:52] VERSION_ID="7"
[2026-01-31 15:39:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 15:39:52] ANSI_COLOR="0;31"
[2026-01-31 15:39:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 15:39:52] HOME_URL="https://www.centos.org/"
[2026-01-31 15:39:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 15:39:52] 
[2026-01-31 15:39:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 15:39:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 15:39:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 15:39:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 15:39:52] 
[2026-01-31 15:39:52] 2026-01-31 20:38:59,534 | INFO     | **************************************
[2026-01-31 15:39:52] 2026-01-31 20:39:00,037 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-31 15:39:52] 2026-01-31 20:39:00,056 | INFO     | sufficient remaining disk space (17664311296 B)
[2026-01-31 15:39:52] 2026-01-31 20:39:00,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 15:39:52] 2026-01-31 20:39:00,057 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 15:39:52] 2026-01-31 20:39:00,057 | INFO     | update_server=False
[2026-01-31 15:39:52] 2026-01-31 20:39:00,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 15:39:52] 2026-01-31 20:39:00,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:39:52] 2026-01-31 20:39:00,058 | INFO     | aborting loop
[2026-01-31 15:39:52] 2026-01-31 20:39:00,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:39:52] 2026-01-31 20:39:00,059 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 15:39:52] 2026-01-31 20:39:00,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 15:39:52] 2026-01-31 20:39:00,785 | INFO     | all data control threads have been joined
[2026-01-31 15:39:52] 2026-01-31 20:39:01,063 | INFO     | [job] job monitor thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,064 | INFO     | [job] retrieve thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,065 | INFO     | [job] queue monitor thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,073 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,291 | INFO     | all job control threads have been joined
[2026-01-31 15:39:52] 2026-01-31 20:39:01,356 | INFO     | [payload] failed_post thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,479 | INFO     | all payload control threads have been joined
[2026-01-31 15:39:52] 2026-01-31 20:39:01,549 | INFO     | [payload] validate_post thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,628 | INFO     | [job] validate thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,791 | INFO     | [data] control thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:01,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,103 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,167 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,297 | INFO     | [job] control thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,438 | INFO     | [data] copytool_in thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,484 | INFO     | [payload] control thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:02,624 | INFO     | [data] copytool_out thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:04,064 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 15:39:52] 2026-01-31 20:39:29,849 | INFO     | PID=917 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-31 15:39:52] 2026-01-31 20:39:29,850 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 15:39:52] 2026-01-31 20:39:29,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 15:39:52] 2026-01-31 20:39:29,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 15:39:52] 2026-01-31 20:39:45,282 | INFO     | [monitor] cgroup control has ended
[2026-01-31 15:39:52] 2026-01-31 20:39:46,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365663299392)>', '<ExcThread(monitor, started 140364556003072)>']
[2026-01-31 15:39:52] 2026-01-31 20:39:46,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 15:39:52] 2026-01-31 20:39:46,939 | INFO     | [monitor] control thread has ended
[2026-01-31 15:39:52] 2026-01-31 20:39:51,711 | INFO     | all workflow threads have been joined
[2026-01-31 15:39:52] 2026-01-31 20:39:51,711 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 15:39:52] 2026-01-31 20:39:51,712 | INFO     | traces error code: 0
[2026-01-31 15:39:52] 2026-01-31 20:39:51,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 15:39:52] 2026-01-31 20:39:51,817 [wrapper] ==== pilot stdout END ====
[2026-01-31 15:39:52] 2026-01-31 20:39:51,822 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 15:39:52] 2026-01-31 20:39:51,827 [wrapper] pilotpid: 917
[2026-01-31 15:39:52] 2026-01-31 20:39:51,831 [wrapper] Pilot exit status: 0
[2026-01-31 15:39:52] 2026-01-31 20:39:51,851 [wrapper] pandaids: 6994615892
[2026-01-31 15:39:52] 2026-01-31 20:39:51,900 [wrapper] cleanup supervisor_pilot 27096 918
[2026-01-31 15:39:52] 2026-01-31 20:39:51,905 [wrapper] Test setup, not cleaning
[2026-01-31 15:39:52] 2026-01-31 20:39:51,909 [wrapper] apfmon messages muted
[2026-01-31 15:39:52] 2026-01-31 20:39:51,914 [wrapper] ==== wrapper stdout END ====
[2026-01-31 15:39:52] 2026-01-31 20:39:51,919 [wrapper] ==== wrapper stderr END ====
[2026-01-31 15:39:52]  *** Error codes and diagnostics ***
[2026-01-31 15:39:52]     "exeErrorCode": 0,
[2026-01-31 15:39:52]     "exeErrorDiag": "",
[2026-01-31 15:39:52]     "pilotErrorCode": 0,
[2026-01-31 15:39:52]     "pilotErrorDiag": "",
[2026-01-31 15:39:52]  *** Listing of results directory ***
[2026-01-31 15:39:52] total 882772
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas    584422 Jan 31 07:07 pilot3.tar.gz
[2026-01-31 15:39:52] -rwx------ 1 boincer umatlas     36322 Jan 31 07:07 runpilot2-wrapper.sh
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas      5111 Jan 31 07:11 queuedata.json
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas       100 Jan 31 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 15:39:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan 31 13:11 run_atlas
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas       105 Jan 31 13:11 job.xml
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas 647877610 Jan 31 13:11 EVNT.48431078._000077.pool.root.1
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 13:11 start_atlas.sh
[2026-01-31 15:39:52] drwxrwx--x 2 boincer umatlas      4096 Jan 31 13:11 shared
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas    597766 Jan 31 13:11 input.tar.gz
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas         0 Jan 31 13:11 boinc_lockfile
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas      2558 Jan 31 13:11 pandaJob.out
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas        57 Jan 31 13:11 setup.sh.local
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas   1010528 Jan 31 13:11 agis_schedconf.cvmfs.json
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas   1511668 Jan 31 13:11 agis_ddmendpoints.agis.ALL.json
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas       432 Jan 31 13:11 workernode_map.json
[2026-01-31 15:39:52] drwx------ 5 boincer umatlas      4096 Jan 31 13:11 pilot3
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas      5909 Jan 31 15:29 init_data.xml
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas 248804862 Jan 31 15:38 HITS.48431080._003939.pool.root.1
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas       530 Jan 31 15:38 boinc_task_state.xml
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas      1049 Jan 31 15:38 memory_monitor_summary.json
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas    426295 Jan 31 15:38 log.48431080._003939.job.log.tgz.1
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas      6404 Jan 31 15:38 heartbeat.json
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas        95 Jan 31 15:39 pilot_heartbeat.json
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas        27 Jan 31 15:39 wrapper_checkpoint.txt
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas      8192 Jan 31 15:39 boinc_mmap_file
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas      4740 Jan 31 15:39 pilotlog.txt
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas   1240044 Jan 31 15:39 log.48431080._003939.job.log.1
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas       357 Jan 31 15:39 output.list
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas       620 Jan 31 15:39 runtime_log
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas   1679360 Jan 31 15:39 result.tar.gz
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas      9336 Jan 31 15:39 runtime_log.err
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas       659 Jan 31 15:39 pyzKDmfwO68n9Rq4apOajLDm4fhM0noT9bVooX4SDm7bNKDm46i3Ym.diag
[2026-01-31 15:39:52] -rw-r--r-- 1 boincer umatlas     20989 Jan 31 15:39 stderr.txt
[2026-01-31 15:39:52] HITS file was successfully produced:
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas 248804862 Jan 31 15:38 shared/HITS.pool.root.1
[2026-01-31 15:39:52]  *** Contents of shared directory: ***
[2026-01-31 15:39:52] total 877920
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas 647877610 Jan 31 13:11 ATLAS.root_0
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas     15845 Jan 31 13:11 start_atlas.sh
[2026-01-31 15:39:52] -rw-r--r-- 2 boincer umatlas    597766 Jan 31 13:11 input.tar.gz
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas 248804862 Jan 31 15:38 HITS.pool.root.1
[2026-01-31 15:39:52] -rw------- 1 boincer umatlas   1679360 Jan 31 15:39 result.tar.gz
15:39:53 (29697): run_atlas exited; CPU time 65875.670021
15:39:53 (29697): called boinc_finish(0)

</stderr_txt>
]]>

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