Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:08 (439906): wrapper (7.7.26015): starting
21:54:08 (439906): wrapper: running run_atlas (--nthreads 4)
[2026-02-02 21:54:08] Arguments: --nthreads 4
[2026-02-02 21:54:08] Threads: 4
[2026-02-02 21:54:08] Checking for CVMFS
[2026-02-02 21:54:08] No cvmfs_config command found, will try listing directly
[2026-02-02 21:54:08] CVMFS is ok
[2026-02-02 21:54:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-02 21:54:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-02 21:54:08] Further information can be found at the LHC@home message board.
[2026-02-02 21:54:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 21:54:08] Checking for apptainer binary...
[2026-02-02 21:54:08] which: no apptainer in ((null))
[2026-02-02 21:54:08] apptainer is not installed, using version from CVMFS
[2026-02-02 21:54:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 21:54:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-02 21:54:09] apptainer works
[2026-02-02 21:54:09] Set ATHENA_PROC_NUMBER=4
[2026-02-02 21:54:09] Set ATHENA_CORE_NUMBER=4
[2026-02-02 21:54:09] Starting ATLAS job with PandaID=6994616392
[2026-02-02 21:54:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 01:28:07]  *** The last 200 lines of the pilot log: ***
[2026-02-03 01:28:07] 2026-02-03 00:25:15,858 | INFO     | job 6994616392 has finished - writing final server update
[2026-02-03 01:28:07] 2026-02-03 00:25:15,858 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3331005/.job.ad'
[2026-02-03 01:28:07] 2026-02-03 00:25:15,858 | INFO     | total number of processed events: 400 (read)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,882 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6994616392/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,883 | INFO     | extracted standard info from prmon json
[2026-02-03 01:28:07] 2026-02-03 00:25:15,883 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 01:28:07] 2026-02-03 00:25:15,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 01:28:07] 2026-02-03 00:25:15,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 01:28:07] 2026-02-03 00:25:15,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 01:28:07] 2026-02-03 00:25:15,888 | INFO     | fitting pss+swap vs Time
[2026-02-03 01:28:07] 2026-02-03 00:25:15,888 | INFO     | sum of square deviations: 2750295288.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,890 | INFO     | sum of deviations: 28680464427.99999
[2026-02-03 01:28:07] 2026-02-03 00:25:15,890 | INFO     | mean x: 1770071979.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,890 | INFO     | mean y: 2343053.84057971
[2026-02-03 01:28:07] 2026-02-03 00:25:15,890 | INFO     | intersect: -18456215432.66512
[2026-02-03 01:28:07] 2026-02-03 00:25:15,890 | INFO     | chi2: 1.3299633020450825
[2026-02-03 01:28:07] 2026-02-03 00:25:15,891 | INFO     | sum of square deviations: 2555770710.5
[2026-02-03 01:28:07] 2026-02-03 00:25:15,892 | INFO     | sum of deviations: 27850067646.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,892 | INFO     | mean x: 1770071826.5
[2026-02-03 01:28:07] 2026-02-03 00:25:15,892 | INFO     | mean y: 2342402.702970297
[2026-02-03 01:28:07] 2026-02-03 00:25:15,892 | INFO     | intersect: -19286015470.628944
[2026-02-03 01:28:07] 2026-02-03 00:25:15,893 | INFO     | chi2: 1.3306165192144386
[2026-02-03 01:28:07] 2026-02-03 00:25:15,893 | INFO     | current chi2=1.3306165192144386 (change=-0.04911542809877666 %)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,893 | INFO     | right removable region: 201
[2026-02-03 01:28:07] 2026-02-03 00:25:15,893 | INFO     | sum of square deviations: 2555770710.5
[2026-02-03 01:28:07] 2026-02-03 00:25:15,894 | INFO     | sum of deviations: 1828621888.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,895 | INFO     | mean x: 1770072131.5
[2026-02-03 01:28:07] 2026-02-03 00:25:15,895 | INFO     | mean y: 2363847.8613861385
[2026-02-03 01:28:07] 2026-02-03 00:25:15,895 | INFO     | intersect: -1264100561.3682206
[2026-02-03 01:28:07] 2026-02-03 00:25:15,895 | INFO     | chi2: 0.0100437091157399
[2026-02-03 01:28:07] 2026-02-03 00:25:15,895 | INFO     | current chi2=0.0100437091157399 (change=99.24481306361643 %)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,896 | INFO     | sum of square deviations: 2370641658.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,897 | INFO     | sum of deviations: 955782830.9999992
[2026-02-03 01:28:07] 2026-02-03 00:25:15,897 | INFO     | mean x: 1770072284.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,897 | INFO     | mean y: 2364549.446700508
[2026-02-03 01:28:07] 2026-02-03 00:25:15,897 | INFO     | intersect: -711283881.1235492
[2026-02-03 01:28:07] 2026-02-03 00:25:15,898 | INFO     | chi2: 0.006057385320346307
[2026-02-03 01:28:07] 2026-02-03 00:25:15,898 | INFO     | current chi2=0.006057385320346307 (change=39.68975753336449 %)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,898 | INFO     | sum of square deviations: 2194675568.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,899 | INFO     | sum of deviations: 1888336800.9999998
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | mean x: 1770072436.5
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | mean y: 2363738.7708333335
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | intersect: -1520637187.204156
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | chi2: 0.004913972347919822
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | current chi2=0.004913972347919822 (change=18.876345352933807 %)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,900 | INFO     | left removable region: 30
[2026-02-03 01:28:07] 2026-02-03 00:25:15,901 | INFO     | sum of square deviations: 1550429070.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | sum of deviations: 2713598481.0000005
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | mean x: 1770072711.0
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | mean y: 2362626.678362573
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | intersect: -3095661470.5021377
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | chi2: 0.00014286790128633704
[2026-02-03 01:28:07] 2026-02-03 00:25:15,902 | INFO     | current memory leak: 1.75 B/s (using 171 data points, chi2=0.00)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | could have reported an average CPU frequency of 2702 MHz (10 samples)
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | ..............................
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | . Timing measurements:
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | . get job = 0 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | . initial setup = 8 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,903 | INFO     | . payload setup = 8 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,904 | INFO     | . stage-in = 0 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,904 | INFO     | . payload execution = 12620 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,904 | INFO     | . stage-out = 1 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,904 | INFO     | . log creation = 0 s
[2026-02-03 01:28:07] 2026-02-03 00:25:15,904 | INFO     | ..............................
[2026-02-03 01:28:07] 2026-02-03 00:25:16,000 | INFO     | 
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | job summary report
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | --------------------------------------------------
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | PanDA job id: 6994616392
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | task id: 48431080
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | errors: (none)
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | pilot state: finished 
[2026-02-03 01:28:07] 2026-02-03 00:25:16,001 | INFO     | transexitcode: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | exeerrorcode: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | exeerrordiag: 
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | exitcode: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | exitmsg: OK
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | cpuconsumptiontime: 48063 s
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | nevents: 400
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | neventsw: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | pid: 458611
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | pgrp: 458611
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | corecount: 4
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | event service: False
[2026-02-03 01:28:07] 2026-02-03 00:25:16,002 | INFO     | sizes: {0: 2277224, 1: 2278354, 12: 2278354, 12633: 2308745, 12634: 2317767, 12635: 2318145}
[2026-02-03 01:28:07] 2026-02-03 00:25:16,003 | INFO     | --------------------------------------------------
[2026-02-03 01:28:07] 2026-02-03 00:25:16,003 | INFO     | 
[2026-02-03 01:28:07] 2026-02-03 00:25:16,003 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-02-03 01:28:07] 2026-02-03 00:25:16,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,029 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,029 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,029 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,030 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | job 6994616392 has completed (purged errors)
[2026-02-03 01:28:07] 2026-02-03 00:25:16,031 | INFO     | overall cleanup function is called
[2026-02-03 01:28:07] 2026-02-03 00:25:17,040 | INFO     | --- collectZombieJob: --- 10, [458611]
[2026-02-03 01:28:07] 2026-02-03 00:25:17,040 | INFO     | zombie collector waiting for pid 458611
[2026-02-03 01:28:07] 2026-02-03 00:25:17,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 01:28:07] 2026-02-03 00:25:17,040 | INFO     | collected zombie processes
[2026-02-03 01:28:07] 2026-02-03 00:25:17,041 | INFO     | will attempt to kill all subprocesses of pid=458611
[2026-02-03 01:28:07] 2026-02-03 00:25:17,836 | INFO     | process IDs to be killed: [458611] (in reverse order)
[2026-02-03 01:28:07] 2026-02-03 00:25:18,098 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 01:28:07] 2026-02-03 00:25:18,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 01:28:07] 2026-02-03 00:25:18,131 | INFO     | did not find any defunct processes belonging to 458611
[2026-02-03 01:28:07] 2026-02-03 00:25:18,158 | INFO     | did not find any defunct processes belonging to 458611
[2026-02-03 01:28:07] 2026-02-03 00:25:18,158 | INFO     | ready for new job
[2026-02-03 01:28:07] 2026-02-03 00:25:18,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 01:28:07] 2026-02-03 00:25:18,161 | INFO     | **************************************
[2026-02-03 01:28:07] 2026-02-03 00:25:18,161 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 01:28:07] 2026-02-03 00:25:18,161 | INFO     | **************************************
[2026-02-03 01:28:07] 2026-02-03 00:25:18,161 | INFO     | 
[2026-02-03 01:28:07] 2026-02-03 00:25:18,170 | INFO     | architecture information:
[2026-02-03 01:28:07] 2026-02-03 00:25:18,170 | INFO     | executing command: cat /etc/os-release
[2026-02-03 01:28:07] 2026-02-03 00:25:18,197 | INFO     | cat /etc/os-release:
[2026-02-03 01:28:07] NAME="CentOS Linux"
[2026-02-03 01:28:07] VERSION="7 (Core)"
[2026-02-03 01:28:07] ID="centos"
[2026-02-03 01:28:07] ID_LIKE="rhel fedora"
[2026-02-03 01:28:07] VERSION_ID="7"
[2026-02-03 01:28:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 01:28:07] ANSI_COLOR="0;31"
[2026-02-03 01:28:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 01:28:07] HOME_URL="https://www.centos.org/"
[2026-02-03 01:28:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 01:28:07] 
[2026-02-03 01:28:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 01:28:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 01:28:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 01:28:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 01:28:07] 
[2026-02-03 01:28:07] 2026-02-03 00:25:18,197 | INFO     | **************************************
[2026-02-03 01:28:07] 2026-02-03 00:25:18,700 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-02-03 01:28:07] 2026-02-03 00:25:18,726 | INFO     | sufficient remaining disk space (3289213042688 B)
[2026-02-03 01:28:07] 2026-02-03 00:25:18,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 01:28:07] 2026-02-03 00:25:18,727 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 01:28:07] 2026-02-03 00:25:18,727 | INFO     | update_server=False
[2026-02-03 01:28:07] 2026-02-03 00:25:18,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 01:28:07] 2026-02-03 00:25:18,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 01:28:07] 2026-02-03 00:25:18,783 | INFO     | all payload control threads have been joined
[2026-02-03 01:28:07] 2026-02-03 00:25:18,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:28:07] 2026-02-03 00:25:18,810 | INFO     | aborting loop
[2026-02-03 01:28:07] 2026-02-03 00:25:19,584 | INFO     | all job control threads have been joined
[2026-02-03 01:28:07] 2026-02-03 00:25:19,728 | INFO     | [job] retrieve thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:19,776 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:19,785 | INFO     | all data control threads have been joined
[2026-02-03 01:28:07] 2026-02-03 00:25:19,786 | INFO     | [payload] control thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:19,815 | INFO     | [job] job monitor thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:19,944 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,320 | INFO     | [data] copytool_in thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,412 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,589 | INFO     | [job] control thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,733 | INFO     | [data] copytool_out thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,790 | INFO     | [data] control thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,928 | INFO     | [payload] validate_post thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:20,990 | INFO     | [payload] failed_post thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:21,011 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 01:28:07] 2026-02-03 00:25:21,088 | INFO     | [job] validate thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:21,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 01:28:07] 2026-02-03 00:25:22,016 | INFO     | [job] queue monitor thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:25,540 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:29,011 | INFO     | job.realtimelogging is not enabled
[2026-02-03 01:28:07] 2026-02-03 00:25:30,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 01:28:07] 2026-02-03 00:25:48,491 | INFO     | [monitor] cgroup control has ended
[2026-02-03 01:28:07] 2026-02-03 00:25:48,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22665165887296)>', '<ExcThread(monitor, started 22664921220864)>']
[2026-02-03 01:28:07] 2026-02-03 00:25:49,614 | INFO     | PID=447146 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | INFO     | .. there are 11 such processes running
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 01:28:07] 2026-02-03 00:25:49,615 | INFO     | [monitor] control thread has ended
[2026-02-03 01:28:07] 2026-02-03 00:25:54,008 | INFO     | all workflow threads have been joined
[2026-02-03 01:28:07] 2026-02-03 00:25:54,008 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 01:28:07] 2026-02-03 00:25:54,009 | INFO     | traces error code: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:54,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 01:28:07] 2026-02-03 00:25:54,180 [wrapper] ==== pilot stdout END ====
[2026-02-03 01:28:07] 2026-02-03 00:25:54,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 01:28:07] 2026-02-03 00:25:54,188 [wrapper] pilotpid: 447146
[2026-02-03 01:28:07] 2026-02-03 00:25:54,191 [wrapper] Pilot exit status: 0
[2026-02-03 01:28:07] 2026-02-03 00:25:54,206 [wrapper] pandaids: 6994616392
[2026-02-03 01:28:07] 2026-02-03 00:25:54,375 [wrapper] cleanup supervisor_pilot  766267 447147
[2026-02-03 01:28:07] 2026-02-03 00:25:54,380 [wrapper] Test setup, not cleaning
[2026-02-03 01:28:07] 2026-02-03 00:25:54,384 [wrapper] apfmon messages muted
[2026-02-03 01:28:07] 2026-02-03 00:25:54,388 [wrapper] ==== wrapper stdout END ====
[2026-02-03 01:28:07] 2026-02-03 00:25:54,392 [wrapper] ==== wrapper stderr END ====
[2026-02-03 01:28:07]  *** Error codes and diagnostics ***
[2026-02-03 01:28:07]     "exeErrorCode": 0,
[2026-02-03 01:28:07]     "exeErrorDiag": "",
[2026-02-03 01:28:07]     "pilotErrorCode": 0,
[2026-02-03 01:28:07]     "pilotErrorDiag": "",
[2026-02-03 01:28:07]  *** Listing of results directory ***
[2026-02-03 01:28:07] total 894152
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc      5111 Jan 31 13:04 queuedata.json
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc    584422 Jan 31 13:04 pilot3.tar.gz
[2026-02-03 01:28:07] -rwx------ 1 boinc boinc     36322 Jan 31 13:04 runpilot2-wrapper.sh
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc       100 Feb  2 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 01:28:07] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 21:54 run_atlas
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc       105 Feb  2 21:54 job.xml
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc      6692 Feb  2 21:54 init_data.xml
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc 652773749 Feb  2 21:54 EVNT.48431078._000080.pool.root.1
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc     15845 Feb  2 21:54 start_atlas.sh
[2026-02-03 01:28:07] drwxrwx--x 2 boinc boinc      4096 Feb  2 21:54 shared
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc    597765 Feb  2 21:54 input.tar.gz
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc         0 Feb  2 21:54 boinc_lockfile
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc      2557 Feb  2 21:54 pandaJob.out
[2026-02-03 01:28:07] -rw------- 1 boinc boinc   1009316 Feb  2 21:54 agis_schedconf.cvmfs.json
[2026-02-03 01:28:07] -rw------- 1 boinc boinc       444 Feb  2 21:54 workernode_map.json
[2026-02-03 01:28:07] drwx------ 5 boinc boinc      4096 Feb  2 21:54 pilot3
[2026-02-03 01:28:07] -rw------- 1 boinc boinc 254623925 Feb  3 01:24 HITS.48431080._004052.pool.root.1
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc       529 Feb  3 01:24 boinc_task_state.xml
[2026-02-03 01:28:07] -rw------- 1 boinc boinc        95 Feb  3 01:24 pilot_heartbeat.json
[2026-02-03 01:28:07] -rw------- 1 boinc boinc      1026 Feb  3 01:25 memory_monitor_summary.json
[2026-02-03 01:28:07] -rw------- 1 boinc boinc   1511668 Feb  3 01:25 agis_ddmendpoints.agis.ALL.json
[2026-02-03 01:28:07] -rw------- 1 boinc boinc    377020 Feb  3 01:25 log.48431080._004052.job.log.tgz.1
[2026-02-03 01:28:07] -rw------- 1 boinc boinc      6352 Feb  3 01:25 heartbeat.json
[2026-02-03 01:28:07] -rw------- 1 boinc boinc      4903 Feb  3 01:25 pilotlog.txt
[2026-02-03 01:28:07] -rw------- 1 boinc boinc   1759854 Feb  3 01:25 log.48431080._004052.job.log.1
[2026-02-03 01:28:07] -rw------- 1 boinc boinc       357 Feb  3 01:25 output.list
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc       620 Feb  3 01:25 runtime_log
[2026-02-03 01:28:07] -rw------- 1 boinc boinc   2150400 Feb  3 01:25 result.tar.gz
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc      9222 Feb  3 01:25 runtime_log.err
[2026-02-03 01:28:07] -rw------- 1 boinc boinc       665 Feb  3 01:25 2AkKDmatO68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmDlNKDm3FZUTn.diag
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc        26 Feb  3 01:27 wrapper_checkpoint.txt
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc      8192 Feb  3 01:28 boinc_mmap_file
[2026-02-03 01:28:07] -rw-r--r-- 1 boinc boinc     20885 Feb  3 01:28 stderr.txt
[2026-02-03 01:28:07] HITS file was successfully produced:
[2026-02-03 01:28:07] -rw------- 1 boinc boinc 254623925 Feb  3 01:24 shared/HITS.pool.root.1
[2026-02-03 01:28:07]  *** Contents of shared directory: ***
[2026-02-03 01:28:07] total 888844
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc 652773749 Feb  2 21:54 ATLAS.root_0
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc     15845 Feb  2 21:54 start_atlas.sh
[2026-02-03 01:28:07] -rw-r--r-- 2 boinc boinc    597765 Feb  2 21:54 input.tar.gz
[2026-02-03 01:28:07] -rw------- 1 boinc boinc 254623925 Feb  3 01:24 HITS.pool.root.1
[2026-02-03 01:28:07] -rw------- 1 boinc boinc   2150400 Feb  3 01:25 result.tar.gz
01:28:08 (439906): run_atlas exited; CPU time 48954.601410
01:28:08 (439906): called boinc_finish(0)

</stderr_txt>
]]>

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