Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:37:28 (2777698): wrapper (7.7.26015): starting
04:37:28 (2777698): wrapper: running run_atlas (--nthreads 2)
[2026-02-01 04:37:28] Arguments: --nthreads 2
[2026-02-01 04:37:28] Threads: 2
[2026-02-01 04:37:28] Checking for CVMFS
[2026-02-01 04:37:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 04:37:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 04:37:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 04:37:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 04:37:28] 2.9.2.0 2245769 5215 60560 155736 1 49 27862956 36864001 0 130560 0 1589016 99.982 154728 13672 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 04:37:28] CVMFS is ok
[2026-02-01 04:37:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 04:37:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 04:37:28] Further information can be found at the LHC@home message board.
[2026-02-01 04:37:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 04:37:28] Checking for apptainer binary...
[2026-02-01 04:37:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 04:37:28] Running /usr/bin/apptainer --version
[2026-02-01 04:37:28] apptainer version 1.4.1-1.1
[2026-02-01 04:37:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 04:37:28] thA315
[2026-02-01 04:37:28] apptainer works
[2026-02-01 04:37:28] Set ATHENA_PROC_NUMBER=2
[2026-02-01 04:37:28] Set ATHENA_CORE_NUMBER=2
[2026-02-01 04:37:28] Starting ATLAS job with PandaID=6978173418
[2026-02-01 04:37:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 06:30:25]  *** The last 200 lines of the pilot log: ***
[2026-02-01 06:30:25] 2026-02-01 05:29:54,444 | INFO     | did not find any defunct processes belonging to 2786127
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | did not find any defunct processes belonging to 2786127
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | ready for new job
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | **************************************
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 06:30:25] 2026-02-01 05:29:54,445 | INFO     | **************************************
[2026-02-01 06:30:25] 2026-02-01 05:29:54,446 | INFO     | 
[2026-02-01 06:30:25] 2026-02-01 05:29:54,446 | INFO     | architecture information:
[2026-02-01 06:30:25] 2026-02-01 05:29:54,446 | INFO     | executing command: cat /etc/os-release
[2026-02-01 06:30:25] 2026-02-01 05:29:54,455 | INFO     | cat /etc/os-release:
[2026-02-01 06:30:25] NAME="CentOS Linux"
[2026-02-01 06:30:25] VERSION="7 (Core)"
[2026-02-01 06:30:25] ID="centos"
[2026-02-01 06:30:25] ID_LIKE="rhel fedora"
[2026-02-01 06:30:25] VERSION_ID="7"
[2026-02-01 06:30:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 06:30:25] ANSI_COLOR="0;31"
[2026-02-01 06:30:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 06:30:25] HOME_URL="https://www.centos.org/"
[2026-02-01 06:30:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 06:30:25] 
[2026-02-01 06:30:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 06:30:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 06:30:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 06:30:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 06:30:25] 
[2026-02-01 06:30:25] 2026-02-01 05:29:54,455 | INFO     | **************************************
[2026-02-01 06:30:25] 2026-02-01 05:29:54,958 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | INFO     | sufficient remaining disk space (494206451712 B)
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | INFO     | update_server=False
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 06:30:25] 2026-02-01 05:29:54,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:30:25] 2026-02-01 05:29:55,655 | INFO     | all job control threads have been joined
[2026-02-01 06:30:25] 2026-02-01 05:29:55,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 06:30:25] 2026-02-01 05:29:55,706 | INFO     | aborting loop
[2026-02-01 06:30:25] 2026-02-01 05:29:55,836 | INFO     | all data control threads have been joined
[2026-02-01 06:30:25] 2026-02-01 05:29:55,974 | INFO     | [job] queue monitor thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:55,976 | INFO     | [job] retrieve thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,212 | INFO     | [payload] validate_post thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 06:30:25] 2026-02-01 05:29:56,461 | INFO     | all payload control threads have been joined
[2026-02-01 06:30:25] 2026-02-01 05:29:56,475 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,498 | INFO     | [job] validate thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,582 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,659 | INFO     | [job] control thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,712 | INFO     | [job] job monitor thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,842 | INFO     | [data] control thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,897 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,948 | INFO     | [data] copytool_in thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:56,977 | INFO     | [data] copytool_out thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:57,304 | INFO     | [payload] failed_post thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:57,466 | INFO     | [payload] control thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:29:59,092 | INFO     | [monitor] cgroup control has ended
[2026-02-01 06:30:25] 2026-02-01 05:30:00,427 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:30:05,649 | INFO     | job.realtimelogging is not enabled
[2026-02-01 06:30:25] 2026-02-01 05:30:06,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 06:30:25] 2026-02-01 05:30:06,853 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508432365376)>', '<ExcThread(monitor, started 140507942467328)>']
[2026-02-01 06:30:25] 2026-02-01 05:30:11,879 | INFO     | all workflow threads have been joined
[2026-02-01 06:30:25] 2026-02-01 05:30:11,880 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 06:30:25] 2026-02-01 05:30:11,880 | INFO     | traces error code: 0
[2026-02-01 06:30:25] 2026-02-01 05:30:11,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 06:30:25] 2026-02-01 05:30:25,300 | INFO     | PID=2781721 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 06:30:25] 2026-02-01 05:30:25,312 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 06:30:25] 2026-02-01 05:30:25,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 06:30:25] 2026-02-01 05:30:25,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 06:30:25] 2026-02-01 05:30:25,312 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 06:30:25] 2026-02-01 05:30:25,312 | INFO     | [monitor] control thread has ended
[2026-02-01 06:30:25] 2026-02-01 05:30:25,350 [wrapper] ==== pilot stdout END ====
[2026-02-01 06:30:25] 2026-02-01 05:30:25,353 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 06:30:25] 2026-02-01 05:30:25,355 [wrapper] pilotpid: 2781721
[2026-02-01 06:30:25] 2026-02-01 05:30:25,357 [wrapper] Pilot exit status: 0
[2026-02-01 06:30:25] 2026-02-01 05:30:25,363 [wrapper] pandaids: 6978173418
[2026-02-01 06:30:25] 2026-02-01 05:30:25,372 [wrapper] cleanup supervisor_pilot 2791091 2781722
[2026-02-01 06:30:25] 2026-02-01 05:30:25,374 [wrapper] Test setup, not cleaning
[2026-02-01 06:30:25] 2026-02-01 05:30:25,376 [wrapper] apfmon messages muted
[2026-02-01 06:30:25] 2026-02-01 05:30:25,378 [wrapper] ==== wrapper stdout END ====
[2026-02-01 06:30:25] 2026-02-01 05:30:25,380 [wrapper] ==== wrapper stderr END ====
[2026-02-01 06:30:25]  *** Error codes and diagnostics ***
[2026-02-01 06:30:25]     "exeErrorCode": 0,
[2026-02-01 06:30:25]     "exeErrorDiag": "",
[2026-02-01 06:30:25]     "pilotErrorCode": 0,
[2026-02-01 06:30:25]     "pilotErrorDiag": "",
[2026-02-01 06:30:25]  *** Listing of results directory ***
[2026-02-01 06:30:25] total 659564
[2026-02-01 06:30:25] -rwx------ 1 boinc boinc     36322 Jan 23 08:45 runpilot2-wrapper.sh
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc    584422 Jan 23 08:46 pilot3.tar.gz
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      5111 Jan 23 08:47 queuedata.json
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc       100 Feb  1 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 06:30:25] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 04:37 run_atlas
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc       105 Feb  1 04:37 job.xml
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc 493023769 Feb  1 04:37 EVNT.48310665._000123.pool.root.1
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc    597756 Feb  1 04:37 input.tar.gz
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:37 start_atlas.sh
[2026-02-01 06:30:25] drwxrwx--x 2 boinc boinc      4096 Feb  1 04:37 shared
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:37 boinc_setup_complete
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      6206 Feb  1 04:37 init_data.xml
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:37 boinc_lockfile
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      2523 Feb  1 04:37 pandaJob.out
[2026-02-01 06:30:25] -rw------- 1 boinc boinc   1010520 Feb  1 04:37 agis_schedconf.cvmfs.json
[2026-02-01 06:30:25] -rw------- 1 boinc boinc   1511668 Feb  1 04:37 agis_ddmendpoints.agis.ALL.json
[2026-02-01 06:30:25] -rw------- 1 boinc boinc       419 Feb  1 04:37 workernode_map.json
[2026-02-01 06:30:25] drwx------ 5 boinc boinc      4096 Feb  1 04:37 pilot3
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc       530 Feb  1 06:29 boinc_task_state.xml
[2026-02-01 06:30:25] -rw------- 1 boinc boinc 175942236 Feb  1 06:29 HITS.48310670._006127.pool.root.1
[2026-02-01 06:30:25] -rw------- 1 boinc boinc      1016 Feb  1 06:29 memory_monitor_summary.json
[2026-02-01 06:30:25] -rw------- 1 boinc boinc        95 Feb  1 06:29 pilot_heartbeat.json
[2026-02-01 06:30:25] -rw------- 1 boinc boinc    281746 Feb  1 06:29 log.48310670._006127.job.log.tgz.1
[2026-02-01 06:30:25] -rw------- 1 boinc boinc      6296 Feb  1 06:29 heartbeat.json
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      8192 Feb  1 06:29 boinc_mmap_file
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc        27 Feb  1 06:29 wrapper_checkpoint.txt
[2026-02-01 06:30:25] -rw------- 1 boinc boinc       747 Feb  1 06:30 pilotlog.txt
[2026-02-01 06:30:25] -rw------- 1 boinc boinc    967048 Feb  1 06:30 log.48310670._006127.job.log.1
[2026-02-01 06:30:25] -rw------- 1 boinc boinc       357 Feb  1 06:30 output.list
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc       620 Feb  1 06:30 runtime_log
[2026-02-01 06:30:25] -rw------- 1 boinc boinc   1269760 Feb  1 06:30 result.tar.gz
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      8896 Feb  1 06:30 runtime_log.err
[2026-02-01 06:30:25] -rw------- 1 boinc boinc       657 Feb  1 06:30 CULMDmm2Q38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAfvKDmO7icqn.diag
[2026-02-01 06:30:25] -rw-r--r-- 1 boinc boinc      9847 Feb  1 06:30 stderr.txt
[2026-02-01 06:30:25] HITS file was successfully produced:
[2026-02-01 06:30:25] -rw------- 1 boinc boinc 175942236 Feb  1 06:29 shared/HITS.pool.root.1
[2026-02-01 06:30:25]  *** Contents of shared directory: ***
[2026-02-01 06:30:25] total 655140
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc 493023769 Feb  1 04:37 ATLAS.root_0
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc    597756 Feb  1 04:37 input.tar.gz
[2026-02-01 06:30:25] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:37 start_atlas.sh
[2026-02-01 06:30:25] -rw------- 1 boinc boinc 175942236 Feb  1 06:29 HITS.pool.root.1
[2026-02-01 06:30:25] -rw------- 1 boinc boinc   1269760 Feb  1 06:30 result.tar.gz
06:30:27 (2777698): run_atlas exited; CPU time 13075.312687
06:30:27 (2777698): called boinc_finish(0)

</stderr_txt>
]]>

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