Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:33:16 (2769612): wrapper (7.7.26015): starting
11:33:16 (2769612): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 11:33:16] Arguments: --nthreads 8
[2026-01-31 11:33:16] Threads: 8
[2026-01-31 11:33:16] Checking for CVMFS
[2026-01-31 11:33:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 11:33:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 11:33:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 11:33:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 11:33:18] 2.13.3.0 14106 125286 216264 155720 0 459 32637240 40960000 29995 16776704 0 1389432281 99.723 1024006527 48493 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-31 11:33:18] CVMFS is ok
[2026-01-31 11:33:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 11:33:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 11:33:18] Further information can be found at the LHC@home message board.
[2026-01-31 11:33:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 11:33:18] Checking for apptainer binary...
[2026-01-31 11:33:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 11:33:18] Running /usr/bin/apptainer --version
[2026-01-31 11:33:18] apptainer version 1.4.5-2.el9
[2026-01-31 11:33:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 11:33:19] c8-7-5.aglt2.org
[2026-01-31 11:33:19] apptainer works
[2026-01-31 11:33:19] Set ATHENA_PROC_NUMBER=8
[2026-01-31 11:33:19] Set ATHENA_CORE_NUMBER=8
[2026-01-31 11:33:19] Starting ATLAS job with PandaID=6994616074
[2026-01-31 11:33:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 14:21:55]  *** The last 200 lines of the pilot log: ***
[2026-01-31 14:21:55] 2026-01-31 19:21:13,982 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6994616074/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 14:21:55] 2026-01-31 19:21:13,991 | INFO     | extracted standard info from prmon json
[2026-01-31 14:21:55] 2026-01-31 19:21:13,991 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 14:21:55] 2026-01-31 19:21:13,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 14:21:55] 2026-01-31 19:21:13,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 14:21:55] 2026-01-31 19:21:13,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 14:21:55] 2026-01-31 19:21:13,994 | INFO     | fitting pss+swap vs Time
[2026-01-31 14:21:55] 2026-01-31 19:21:13,994 | INFO     | sum of square deviations: 1342874379.7791367
[2026-01-31 14:21:55] 2026-01-31 19:21:13,994 | INFO     | sum of deviations: 7111563059.938648
[2026-01-31 14:21:55] 2026-01-31 19:21:14,002 | INFO     | mean x: 1769882270.03681
[2026-01-31 14:21:55] 2026-01-31 19:21:14,003 | INFO     | mean y: 2543139.343558282
[2026-01-31 14:21:55] 2026-01-31 19:21:14,003 | INFO     | intersect: -9370358422.829569
[2026-01-31 14:21:55] 2026-01-31 19:21:14,003 | INFO     | chi2: 2.3078856627889244
[2026-01-31 14:21:55] 2026-01-31 19:21:14,003 | INFO     | sum of square deviations: 1223050707.2721517
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | sum of deviations: 17231002792.97467
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | mean x: 1769882117.5379746
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | mean y: 2555688.670886076
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | intersect: -24932505081.255672
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | chi2: 1.6294363152691829
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | current chi2=1.6294363152691829 (change=29.397008632562898 %)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | sum of square deviations: 1110566126.8366048
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | sum of deviations: 16737467802.006535
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | mean x: 1769881965.0326798
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | mean y: 2555019.3986928104
[2026-01-31 14:21:55] 2026-01-31 19:21:14,004 | INFO     | intersect: -26671536407.70725
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | chi2: 1.63135892299775
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | current chi2=1.63135892299775 (change=-0.1179921983173434 %)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | right removable region: 152
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | sum of square deviations: 1223047047.2721517
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | sum of deviations: -18911338795.031643
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | mean x: 1769882422.5379746
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | mean y: 2575763.588607595
[2026-01-31 14:21:55] 2026-01-31 19:21:14,005 | INFO     | intersect: 27369344846.29837
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | chi2: 0.7198176290295515
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | current chi2=0.7198176290295515 (change=68.81051602185092 %)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | sum of square deviations: 1110568689.764709
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | sum of deviations: -17595667103.019608
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | mean x: 1769882575.0392158
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | mean y: 2573965.1699346406
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | intersect: 28044301495.254658
[2026-01-31 14:21:55] 2026-01-31 19:21:14,006 | INFO     | chi2: 0.7197550410613921
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | current chi2=0.7197550410613921 (change=0.008694975732084958 %)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | left removable region: 20
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | sum of square deviations: 713161252.8106064
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | sum of deviations: -3972156871.71212
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | mean x: 1769882544.5378788
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | mean y: 2583589.742424242
[2026-01-31 14:21:55] 2026-01-31 19:21:14,015 | INFO     | intersect: 9860453859.19814
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | chi2: 0.011493829448608578
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | current memory leak: -5.57 B/s (using 132 data points, chi2=0.01)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | could have reported an average CPU frequency of 3793 MHz (9 samples)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | ..............................
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . Timing measurements:
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . get job = 0 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . initial setup = 25 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . payload setup = 27 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . stage-in = 0 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . payload execution = 9954 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . stage-out = 3 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,016 | INFO     | . log creation = 0 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,017 | INFO     | ..............................
[2026-01-31 14:21:55] 2026-01-31 19:21:14,632 | INFO     | 
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | job summary report
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | --------------------------------------------------
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | PanDA job id: 6994616074
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | task id: 48431080
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | errors: (none)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | pilot state: finished 
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | transexitcode: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | exeerrorcode: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | exeerrordiag: 
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | exitcode: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | exitmsg: OK
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | cpuconsumptiontime: 32693 s
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | nevents: 400
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | neventsw: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | pid: 2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | pgrp: 2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | corecount: 8
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | event service: False
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | sizes: {0: 2277825, 1: 2278342, 12: 2278342, 9986: 2306960, 9987: 2306959, 9991: 2316013, 9992: 2316197, 9995: 2316455}
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | --------------------------------------------------
[2026-01-31 14:21:55] 2026-01-31 19:21:14,633 | INFO     | 
[2026-01-31 14:21:55] 2026-01-31 19:21:14,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | job 6994616074 has completed (purged errors)
[2026-01-31 14:21:55] 2026-01-31 19:21:14,929 | INFO     | overall cleanup function is called
[2026-01-31 14:21:55] 2026-01-31 19:21:15,937 | INFO     | --- collectZombieJob: --- 10, [2793445]
[2026-01-31 14:21:55] 2026-01-31 19:21:15,937 | INFO     | zombie collector waiting for pid 2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:15,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 14:21:55] 2026-01-31 19:21:15,937 | INFO     | collected zombie processes
[2026-01-31 14:21:55] 2026-01-31 19:21:15,937 | INFO     | will attempt to kill all subprocesses of pid=2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:18,550 | INFO     | PID=2781131 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-31 14:21:55] 2026-01-31 19:21:18,550 | INFO     | .. there are 26 such processes running
[2026-01-31 14:21:55] 2026-01-31 19:21:18,745 | INFO     | process IDs to be killed: [2793445] (in reverse order)
[2026-01-31 14:21:55] 2026-01-31 19:21:19,528 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 14:21:55] 2026-01-31 19:21:19,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 14:21:55] 2026-01-31 19:21:19,635 | INFO     | did not find any defunct processes belonging to 2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:19,741 | INFO     | did not find any defunct processes belonging to 2793445
[2026-01-31 14:21:55] 2026-01-31 19:21:19,742 | INFO     | ready for new job
[2026-01-31 14:21:55] 2026-01-31 19:21:19,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 14:21:55] 2026-01-31 19:21:19,744 | INFO     | **************************************
[2026-01-31 14:21:55] 2026-01-31 19:21:19,744 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 14:21:55] 2026-01-31 19:21:19,744 | INFO     | **************************************
[2026-01-31 14:21:55] 2026-01-31 19:21:19,744 | INFO     | 
[2026-01-31 14:21:55] 2026-01-31 19:21:19,775 | INFO     | architecture information:
[2026-01-31 14:21:55] 2026-01-31 19:21:19,800 | INFO     | executing command: cat /etc/os-release
[2026-01-31 14:21:55] 2026-01-31 19:21:19,846 | INFO     | cat /etc/os-release:
[2026-01-31 14:21:55] NAME="CentOS Linux"
[2026-01-31 14:21:55] VERSION="7 (Core)"
[2026-01-31 14:21:55] ID="centos"
[2026-01-31 14:21:55] ID_LIKE="rhel fedora"
[2026-01-31 14:21:55] VERSION_ID="7"
[2026-01-31 14:21:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 14:21:55] ANSI_COLOR="0;31"
[2026-01-31 14:21:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 14:21:55] HOME_URL="https://www.centos.org/"
[2026-01-31 14:21:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 14:21:55] 
[2026-01-31 14:21:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 14:21:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 14:21:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 14:21:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 14:21:55] 
[2026-01-31 14:21:55] 2026-01-31 19:21:19,846 | INFO     | **************************************
[2026-01-31 14:21:55] 2026-01-31 19:21:20,350 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-31 14:21:55] 2026-01-31 19:21:20,420 | INFO     | sufficient remaining disk space (169295740928 B)
[2026-01-31 14:21:55] 2026-01-31 19:21:20,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 14:21:55] 2026-01-31 19:21:20,420 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 14:21:55] 2026-01-31 19:21:20,420 | INFO     | update_server=False
[2026-01-31 14:21:55] 2026-01-31 19:21:20,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 14:21:55] 2026-01-31 19:21:20,601 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 14:21:55] 2026-01-31 19:21:20,601 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 14:21:55] 2026-01-31 19:21:20,601 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 14:21:55] 2026-01-31 19:21:20,601 | INFO     | will abort loop
[2026-01-31 14:21:55] 2026-01-31 19:21:20,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 14:21:55] 2026-01-31 19:21:20,982 | INFO     | all data control threads have been joined
[2026-01-31 14:21:55] 2026-01-31 19:21:21,117 | INFO     | all payload control threads have been joined
[2026-01-31 14:21:55] 2026-01-31 19:21:21,277 | INFO     | all job control threads have been joined
[2026-01-31 14:21:55] 2026-01-31 19:21:21,426 | INFO     | [job] retrieve thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:21,463 | INFO     | [data] copytool_in thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:21,465 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:21,607 | INFO     | [job] job monitor thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:21,699 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:21,704 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 14:21:55] 2026-01-31 19:21:22,002 | INFO     | [data] control thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,123 | INFO     | [payload] control thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,283 | INFO     | [job] control thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,685 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,722 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,732 | INFO     | [job] validate thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,876 | INFO     | [payload] failed_post thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,876 | INFO     | [payload] validate_post thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:22,898 | INFO     | [data] copytool_out thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:23,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 14:21:55] 2026-01-31 19:21:24,260 | INFO     | [job] queue monitor thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:25,730 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 14:21:55] 2026-01-31 19:21:43,867 | INFO     | [monitor] cgroup control has ended
[2026-01-31 14:21:55] 2026-01-31 19:21:45,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140531668682560)>', '<ExcThread(monitor, started 140531178919680)>']
[2026-01-31 14:21:55] 2026-01-31 19:21:50,444 | INFO     | all workflow threads have been joined
[2026-01-31 14:21:55] 2026-01-31 19:21:50,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 14:21:55] 2026-01-31 19:21:50,444 | INFO     | traces error code: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:50,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 14:21:55] 2026-01-31 19:21:53,362 | INFO     | PID=2781131 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 14:21:55] 2026-01-31 19:21:53,362 | INFO     | .. there are 26 such processes running
[2026-01-31 14:21:55] 2026-01-31 19:21:53,363 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 14:21:55] 2026-01-31 19:21:53,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 14:21:55] 2026-01-31 19:21:53,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 14:21:55] 2026-01-31 19:21:53,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 14:21:55] 2026-01-31 19:21:53,363 | INFO     | [monitor] control thread has ended
[2026-01-31 14:21:55] 2026-01-31 19:21:53,946 [wrapper] ==== pilot stdout END ====
[2026-01-31 14:21:55] 2026-01-31 19:21:53,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 14:21:55] 2026-01-31 19:21:53,994 [wrapper] pilotpid: 2781131
[2026-01-31 14:21:55] 2026-01-31 19:21:54,021 [wrapper] Pilot exit status: 0
[2026-01-31 14:21:55] 2026-01-31 19:21:54,179 [wrapper] pandaids: 6994616074
[2026-01-31 14:21:55] 2026-01-31 19:21:55,085 [wrapper] cleanup supervisor_pilot 3616793 2781132
[2026-01-31 14:21:55] 2026-01-31 19:21:55,121 [wrapper] Test setup, not cleaning
[2026-01-31 14:21:55] 2026-01-31 19:21:55,151 [wrapper] apfmon messages muted
[2026-01-31 14:21:55] 2026-01-31 19:21:55,176 [wrapper] ==== wrapper stdout END ====
[2026-01-31 14:21:55] 2026-01-31 19:21:55,195 [wrapper] ==== wrapper stderr END ====
[2026-01-31 14:21:55]  *** Error codes and diagnostics ***
[2026-01-31 14:21:55]     "exeErrorCode": 0,
[2026-01-31 14:21:55]     "exeErrorDiag": "",
[2026-01-31 14:21:55]     "pilotErrorCode": 0,
[2026-01-31 14:21:55]     "pilotErrorDiag": "",
[2026-01-31 14:21:55]  *** Listing of results directory ***
[2026-01-31 14:21:55] total 892688
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 07:04 queuedata.json
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 07:04 pilot3.tar.gz
[2026-01-31 14:21:55] -rwx------. 1 boincer umatlas     36322 Jan 31 07:04 runpilot2-wrapper.sh
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas       100 Jan 31 11:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 14:21:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 31 11:33 run_atlas
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas       105 Jan 31 11:33 job.xml
[2026-01-31 14:21:55] -rw-r--r--. 2 boincer umatlas 646472125 Jan 31 11:33 EVNT.48431078._000078.pool.root.1
[2026-01-31 14:21:55] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 11:33 start_atlas.sh
[2026-01-31 14:21:55] drwxrwx--x. 2 boincer umatlas      4096 Jan 31 11:33 shared
[2026-01-31 14:21:55] -rw-r--r--. 2 boincer umatlas    597770 Jan 31 11:33 input.tar.gz
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas         0 Jan 31 11:33 boinc_lockfile
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas      2557 Jan 31 11:33 pandaJob.out
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas        57 Jan 31 11:33 setup.sh.local
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas   1010520 Jan 31 11:34 agis_schedconf.cvmfs.json
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas   1511668 Jan 31 11:34 agis_ddmendpoints.agis.ALL.json
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas       427 Jan 31 11:34 workernode_map.json
[2026-01-31 14:21:55] drwx------. 5 boincer umatlas      4096 Jan 31 11:34 pilot3
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas      7172 Jan 31 14:18 init_data.xml
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas 260330866 Jan 31 14:19 HITS.48431080._003959.pool.root.1
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas       530 Jan 31 14:19 boinc_task_state.xml
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas      1043 Jan 31 14:21 memory_monitor_summary.json
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas    401361 Jan 31 14:21 log.48431080._003959.job.log.tgz.1
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas      6350 Jan 31 14:21 heartbeat.json
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas       823 Jan 31 14:21 pilotlog.txt
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas        95 Jan 31 14:21 pilot_heartbeat.json
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas   1286026 Jan 31 14:21 log.48431080._003959.job.log.1
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas       357 Jan 31 14:21 output.list
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas      8192 Jan 31 14:21 boinc_mmap_file
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas       620 Jan 31 14:21 runtime_log
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas   1699840 Jan 31 14:21 result.tar.gz
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas      9332 Jan 31 14:21 runtime_log.err
[2026-01-31 14:21:55] -rw-------. 1 boincer umatlas       657 Jan 31 14:21 44jMDmZtO68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHkNKDmEQepwn.diag
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas        27 Jan 31 14:21 wrapper_checkpoint.txt
[2026-01-31 14:21:55] -rw-r--r--. 1 boincer umatlas     21261 Jan 31 14:21 stderr.txt
[2026-01-31 14:21:56] HITS file was successfully produced:
[2026-01-31 14:21:56] -rw-------. 1 boincer umatlas 260330866 Jan 31 14:19 shared/HITS.pool.root.1
[2026-01-31 14:21:56]  *** Contents of shared directory: ***
[2026-01-31 14:21:56] total 887824
[2026-01-31 14:21:56] -rw-r--r--. 2 boincer umatlas 646472125 Jan 31 11:33 ATLAS.root_0
[2026-01-31 14:21:56] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 11:33 start_atlas.sh
[2026-01-31 14:21:56] -rw-r--r--. 2 boincer umatlas    597770 Jan 31 11:33 input.tar.gz
[2026-01-31 14:21:56] -rw-------. 1 boincer umatlas 260330866 Jan 31 14:19 HITS.pool.root.1
[2026-01-31 14:21:56] -rw-------. 1 boincer umatlas   1699840 Jan 31 14:21 result.tar.gz
14:21:57 (2769612): run_atlas exited; CPU time 33031.633653
14:21:57 (2769612): called boinc_finish(0)

</stderr_txt>
]]>

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