Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-01 11:59:50 (43864): vboxwrapper version 26210
2026-02-01 11:59:50 (43864): BOINC client version: 8.2.8
2026-02-01 11:59:51 (43864): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-01 11:59:51 (43864): Successfully copied 'init_data.xml' to the shared directory.
2026-02-01 11:59:51 (43864): Create VM. (boinc_fcc60a0f6c9fccaa, slot#2)
2026-02-01 11:59:52 (43864): Setting Memory Size for VM. (4700MB)
2026-02-01 11:59:52 (43864): Setting CPU Count for VM. (7)
2026-02-01 11:59:52 (43864): Setting Chipset Options for VM.
2026-02-01 11:59:52 (43864): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-01 11:59:53 (43864): Setting Boot Options for VM.
2026-02-01 11:59:53 (43864): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-01 11:59:53 (43864): Enabling VM Network Access.
2026-02-01 11:59:54 (43864): Disabling USB Support for VM.
2026-02-01 11:59:54 (43864): Disabling COM Port Support for VM.
2026-02-01 11:59:54 (43864): Disabling LPT Port Support for VM.
2026-02-01 11:59:54 (43864): Disabling Audio Support for VM.
2026-02-01 11:59:55 (43864): Disabling Clipboard Support for VM.
2026-02-01 11:59:55 (43864): Disabling Drag and Drop Support for VM.
2026-02-01 11:59:55 (43864): Adding storage controller(s) to VM.
2026-02-01 11:59:55 (43864): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-01 11:59:56 (43864): Adding VirtualBox Guest Additions to VM.
2026-02-01 11:59:56 (43864): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-01 11:59:56 (43864): forwarding host port 51649 to guest port 80
2026-02-01 11:59:57 (43864): Enabling remote desktop for VM.
2026-02-01 11:59:57 (43864): Required extension pack not installed, remote desktop not enabled.
2026-02-01 11:59:57 (43864): Enabling shared directory for VM.
2026-02-01 11:59:57 (43864): Starting VM using VBoxManage interface. (boinc_fcc60a0f6c9fccaa, slot#2)
2026-02-01 12:00:01 (43864): Successfully started VM. (PID = '24768')
2026-02-01 12:00:01 (43864): Reporting VM Process ID to BOINC.
2026-02-01 12:00:01 (43864): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-01 12:00:01 (43864): Guest Log: CPUID EDX: 0x178bfbff
2026-02-01 12:00:01 (43864): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-01 12:00:01 (43864): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-01 12:00:01 (43864): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-01 12:00:01 (43864): Detected: Web Application Enabled (http://localhost:51649)
2026-02-01 12:00:01 (43864): Preference change detected
2026-02-01 12:00:01 (43864): Setting CPU throttle for VM. (100%)
2026-02-01 12:00:02 (43864): Setting checkpoint interval to 3300 seconds. (Higher value of (Preference: 3300 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-01 12:00:03 (43864): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-01 12:00:03 (43864): Guest Log: BIOS: Booting from Hard Disk...
2026-02-01 12:00:06 (43864): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-01 12:00:06 (43864): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-01 12:00:06 (43864): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-01 12:00:11 (43864): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-01 12:00:11 (43864): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-01 12:00:14 (43864): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000109 main     Log opened 2026-02-01T12:00:12.742862000Z
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000194 main     OS Product: Linux
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000221 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000265 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000266 main     Process ID: 1359
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.000266 main     Package type: LINUX_64BITS_GENERIC
2026-02-01 12:00:14 (43864): Guest Log: 00:00:00.001296 main     5.2.32 r132073 started. Verbose level = 0
2026-02-01 12:00:14 (43864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-01 12:00:14 (43864): Guest Log: [INFO] Mounting shared directory
2026-02-01 12:00:14 (43864): Guest Log: [INFO] Checking for init_data.xml
2026-02-01 12:00:21 (43864): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-01 12:00:21 (43864): Guest Log: [INFO] Detected branch: prod
2026-02-01 12:00:21 (43864): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-01 12:00:21 (43864): Guest Log: Copying input files
2026-02-01 12:00:22 (43864): Guest Log: Copied input files into RunAtlas.
2026-02-01 12:00:23 (43864): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-01 12:00:23 (43864): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-01 12:00:23 (43864): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-01 12:00:23 (43864): Guest Log: Further information can be found at the LHC@home message board.
2026-02-01 12:00:24 (43864): Guest Log: 00:00:10.018334 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 387 923 018 000ns (GuestNow=1 769 914 824 822 508 000 ns GuestLast=1 769 947 212 745 526 000 ns fSetTimeLastLoop=true )
2026-02-01 12:00:36 (43864): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-01 12:00:36 (43864): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-01 12:00:36 (43864): Guest Log: 2.6.3.0 1640 0 32200 155734 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-01 12:00:37 (43864): Guest Log: copied the webapp to /var/www
2026-02-01 12:00:37 (43864): Guest Log: ATHENA_PROC_NUMBER=7
2026-02-01 12:00:37 (43864): Guest Log: ATHENA_CORE_NUMBER=7
2026-02-01 12:00:37 (43864): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-01 12:00:37 (43864): Guest Log:  *** Starting ATLAS job. (PandaID=6991149457 taskID=48318042) ***
2026-02-01 13:02:52 (43864): Guest Log:  *** Job finished ***
2026-02-01 13:02:52 (43864): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:32,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:32,428 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:44,801 | INFO     | [monitor] cgroup control has ended
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:46,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024752928576)>', '<ExcThread(monitor, started 140023584257792)>']
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:46,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:46,647 | INFO     | [monitor] control thread has ended
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,031 | INFO     | all workflow threads have been joined
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,031 | INFO     | end of generic workflow (traces error code: 0)
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,032 | INFO     | traces error code: 0
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,076 [wrapper] ==== pilot stdout END ====
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,079 [wrapper] ==== wrapper stdout RESUME ====
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,081 [wrapper] pilotpid: 6075
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,084 [wrapper] Pilot exit status: 0
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,127 [wrapper] pandaids: 6991149457
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,143 [wrapper] cleanup supervisor_pilot 25051 6076
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,146 [wrapper] Test setup, not cleaning
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,151 [wrapper] apfmon messages muted
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,154 [wrapper] ==== wrapper stdout END ====
2026-02-01 13:02:52 (43864): Guest Log: 2026-02-01 04:02:51,156 [wrapper] ==== wrapper stderr END ====
2026-02-01 13:02:52 (43864): Guest Log:  *** Error codes and diagnostics ***
2026-02-01 13:02:52 (43864): Guest Log:     "exeErrorCode": 0,
2026-02-01 13:02:52 (43864): Guest Log:     "exeErrorDiag": "",
2026-02-01 13:02:52 (43864): Guest Log:     "pilotErrorCode": 0,
2026-02-01 13:02:52 (43864): Guest Log:     "pilotErrorDiag": "",
2026-02-01 13:02:52 (43864): Guest Log:  *** Listing of results directory ***
2026-02-01 13:02:52 (43864): Guest Log: total 187556
2026-02-01 13:02:52 (43864): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 31 09:27 pilot3.tar.gz
2026-02-01 13:02:52 (43864): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 31 09:31 runpilot2-wrapper.sh
2026-02-01 13:02:52 (43864): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 31 09:35 queuedata.json
2026-02-01 13:02:52 (43864): Guest Log: -rwxr-xr-x. 1 atlas atlas      8964 Feb  1 03:00 init_data.xml
2026-02-01 13:02:52 (43864): Guest Log: -rwxr-xr-x. 1 atlas atlas    597769 Feb  1 03:00 input.tar.gz
2026-02-01 13:02:52 (43864): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  1 03:00 start_atlas.sh
2026-02-01 13:02:52 (43864): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  1 03:00 EVNT.48318040._000103.pool.root.1 -> /data/./ATLAS.root_0
2026-02-01 13:02:52 (43864): Guest Log: -rw-r--r--. 1 atlas atlas      2536 Feb  1 03:00 pandaJob.out
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas   1010520 Feb  1 03:01 agis_schedconf.cvmfs.json
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  1 03:01 agis_ddmendpoints.agis.ALL.json
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas       434 Feb  1 03:01 workernode_map.json
2026-02-01 13:02:52 (43864): Guest Log: drwx------. 5 atlas atlas      4096 Feb  1 03:01 pilot3
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas 186481871 Feb  1 04:01 HITS.48318042._005387.pool.root.1
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas      1027 Feb  1 04:01 memory_monitor_summary.json
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas        95 Feb  1 04:01 pilot_heartbeat.json
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas    312330 Feb  1 04:01 log.48318042._005387.job.log.tgz.1
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas      6384 Feb  1 04:02 heartbeat.json
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas      5059 Feb  1 04:02 pilotlog.txt
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas    539456 Feb  1 04:02 log.48318042._005387.job.log.1
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas       357 Feb  1 04:02 output.list
2026-02-01 13:02:52 (43864): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  1 04:02 runtime_log
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas    870400 Feb  1 04:02 result.tar.gz
2026-02-01 13:02:52 (43864): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Feb  1 04:02 runtime_log.err
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas       650 Feb  1 04:02 iXnLDm8UM68n9Rq4apOajLDm4fhM0noT9bVooX4SDm4PNKDmRMqWsn.diag
2026-02-01 13:02:52 (43864): Guest Log: Looking for outputfile HITS.48318042._005387.pool.root.1
2026-02-01 13:02:52 (43864): Guest Log: HITS file was successfully produced
2026-02-01 13:02:52 (43864): Guest Log: -rw-------. 1 atlas atlas 186481871 Feb  1 04:01 /home/atlas/RunAtlas/HITS.48318042._005387.pool.root.1
2026-02-01 13:02:53 (43864): Guest Log: Successfully finished the ATLAS job!
2026-02-01 13:02:53 (43864): Guest Log: Copying the results back to the shared directory!
2026-02-01 13:02:53 (43864): Guest Log:  *** Contents of shared directory: ***
2026-02-01 13:02:53 (43864): Guest Log: total 667060
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root 495087388 Feb  1 02:59 ATLAS.root_0
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root 186481871 Feb  1 04:02 HITS.pool.root.1
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root      8964 Feb  1 02:59 init_data.xml
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root    597769 Jan 31 16:36 input.tar.gz
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root    870400 Feb  1 04:02 result.tar.gz
2026-02-01 13:02:53 (43864): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 31 16:36 start_atlas.sh
2026-02-01 13:02:53 (43864): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-01 13:02:53 (43864): VM Completion File Detected.
2026-02-01 13:02:53 (43864): Powering off VM.
2026-02-01 13:02:53 (43864): Successfully stopped VM.
2026-02-01 13:02:53 (43864): Deregistering VM. (boinc_fcc60a0f6c9fccaa, slot#2)
2026-02-01 13:02:53 (43864): Removing network bandwidth throttle group from VM.
2026-02-01 13:02:53 (43864): Removing VM from VirtualBox.
2026-02-01 13:02:59 (43864): called boinc_finish(0)

</stderr_txt>
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