Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:32 (721675): wrapper (7.7.26015): starting
20:53:32 (721675): wrapper: running run_atlas (--nthreads 6)
[2026-02-01 20:53:32] Arguments: --nthreads 6
[2026-02-01 20:53:32] Threads: 6
[2026-02-01 20:53:32] Checking for CVMFS
[2026-02-01 20:53:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 20:53:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 20:53:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 20:53:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 20:53:41] 2.13.3.0 707625 134 48660 155749 2 50 41336135 52428800 0 130560 0 45895 99.964 5499 99 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-01 20:53:41] CVMFS is ok
[2026-02-01 20:53:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 20:53:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-01 20:53:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-01 20:53:41] Further information can be found at the LHC@home message board.
[2026-02-01 20:53:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 20:53:41] Checking for apptainer binary...
[2026-02-01 20:53:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 20:53:41] Running /usr/bin/apptainer --version
[2026-02-01 20:53:41] apptainer version 1.4.5-2.el9
[2026-02-01 20:53:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 20:53:41] Atto003
[2026-02-01 20:53:41] apptainer works
[2026-02-01 20:53:41] Set ATHENA_PROC_NUMBER=6
[2026-02-01 20:53:41] Set ATHENA_CORE_NUMBER=6
[2026-02-01 20:53:42] Starting ATLAS job with PandaID=6991269424
[2026-02-01 20:53:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 22:46:38]  *** The last 200 lines of the pilot log: ***
[2026-02-01 22:46:38] 2026-02-01 13:45:42,755 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,755 | INFO     | log transfer has been attempted: DONE
[2026-02-01 22:46:38] 2026-02-01 13:45:42,755 | INFO     | job 6991269424 has finished - writing final server update
[2026-02-01 22:46:38] 2026-02-01 13:45:42,755 | INFO     | total number of processed events: 400 (read)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,757 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6991269424/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,758 | INFO     | extracted standard info from prmon json
[2026-02-01 22:46:38] 2026-02-01 13:45:42,758 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 22:46:38] 2026-02-01 13:45:42,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 22:46:38] 2026-02-01 13:45:42,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 22:46:38] 2026-02-01 13:45:42,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | fitting pss+swap vs Time
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | sum of square deviations: 412686807.5
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | sum of deviations: 6583376138.999999
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | mean x: 1769950208.5
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | mean y: 2446157.345454545
[2026-02-01 22:46:38] 2026-02-01 13:45:42,759 | INFO     | intersect: -28232640979.17992
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | chi2: 2.253031189276652
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | sum of square deviations: 358927660.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | sum of deviations: 12766956448.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | mean x: 1769950056.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | mean y: 2462997.3238095236
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | intersect: -62954165310.69559
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | chi2: 1.5985922635911372
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | current chi2=1.5985922635911372 (change=29.047042437775843 %)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | sum of square deviations: 310052325.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,760 | INFO     | sum of deviations: 12105307199.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | mean x: 1769949903.5
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | mean y: 2460931.28
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | intersect: -69101317950.90677
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | chi2: 1.6025711502818079
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | current chi2=1.6025711502818079 (change=-0.24889940864172475 %)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | right removable region: 99
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | sum of square deviations: 358927660.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | sum of deviations: -9363827387.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | mean x: 1769950361.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | mean y: 2490345.066666667
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | intersect: 46177559895.188095
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | chi2: 0.7613693684563314
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | current chi2=0.7613693684563314 (change=66.20688732228456 %)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,761 | INFO     | sum of square deviations: 310052325.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | sum of deviations: -4559938917.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | mean x: 1769950513.5
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | mean y: 2475242.04
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | intersect: 26033133866.10542
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | chi2: 0.6968235038799077
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | current chi2=0.6968235038799077 (change=8.477601969631355 %)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | left removable region: 20
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | sum of square deviations: 152858680.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | sum of deviations: 516715322.9999998
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | mean x: 1769950483.0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | mean y: 2498845.3924050634
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | intersect: -5980547295.771123
[2026-02-01 22:46:38] 2026-02-01 13:45:42,762 | INFO     | chi2: 0.0009777515069008336
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | current memory leak: 3.38 B/s (using 79 data points, chi2=0.00)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | could have reported an average CPU frequency of 3599 MHz (7 samples)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | ..............................
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . Timing measurements:
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . get job = 0 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . initial setup = 10 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . payload setup = 6 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . stage-in = 0 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . payload execution = 6656 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . stage-out = 0 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | . log creation = 0 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,763 | INFO     | ..............................
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | 
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | job summary report
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | --------------------------------------------------
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | PanDA job id: 6991269424
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | task id: 48318026
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | errors: (none)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 22:46:38] 2026-02-01 13:45:42,798 | INFO     | pilot state: finished 
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | transexitcode: 0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | exeerrorcode: 0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | exeerrordiag: 
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | exitcode: 0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | exitmsg: OK
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | cpuconsumptiontime: 37784 s
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | nevents: 400
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | neventsw: 0
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | pid: 730468
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | pgrp: 730468
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | corecount: 6
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | event service: False
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | sizes: {0: 2278259, 11: 2278259, 6666: 2305444, 6668: 2314470, 6670: 2314720}
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | --------------------------------------------------
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | 
[2026-02-01 22:46:38] 2026-02-01 13:45:42,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 22:46:38] 2026-02-01 13:45:42,813 | INFO     | job 6991269424 has completed (purged errors)
[2026-02-01 22:46:38] 2026-02-01 13:45:42,814 | INFO     | overall cleanup function is called
[2026-02-01 22:46:38] 2026-02-01 13:45:43,819 | INFO     | --- collectZombieJob: --- 10, [730468]
[2026-02-01 22:46:38] 2026-02-01 13:45:43,819 | INFO     | zombie collector waiting for pid 730468
[2026-02-01 22:46:38] 2026-02-01 13:45:43,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 22:46:38] 2026-02-01 13:45:43,819 | INFO     | collected zombie processes
[2026-02-01 22:46:38] 2026-02-01 13:45:43,819 | INFO     | will attempt to kill all subprocesses of pid=730468
[2026-02-01 22:46:38] 2026-02-01 13:45:43,882 | INFO     | process IDs to be killed: [730468] (in reverse order)
[2026-02-01 22:46:38] 2026-02-01 13:45:43,907 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 22:46:38] 2026-02-01 13:45:43,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 22:46:38] 2026-02-01 13:45:43,909 | INFO     | did not find any defunct processes belonging to 730468
[2026-02-01 22:46:38] 2026-02-01 13:45:43,911 | INFO     | did not find any defunct processes belonging to 730468
[2026-02-01 22:46:38] 2026-02-01 13:45:43,911 | INFO     | ready for new job
[2026-02-01 22:46:38] 2026-02-01 13:45:43,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 22:46:38] 2026-02-01 13:45:43,912 | INFO     | **************************************
[2026-02-01 22:46:38] 2026-02-01 13:45:43,912 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 22:46:38] 2026-02-01 13:45:43,912 | INFO     | **************************************
[2026-02-01 22:46:38] 2026-02-01 13:45:43,913 | INFO     | 
[2026-02-01 22:46:38] 2026-02-01 13:45:43,913 | INFO     | architecture information:
[2026-02-01 22:46:38] 2026-02-01 13:45:43,914 | INFO     | executing command: cat /etc/os-release
[2026-02-01 22:46:38] 2026-02-01 13:45:43,923 | INFO     | cat /etc/os-release:
[2026-02-01 22:46:38] NAME="CentOS Linux"
[2026-02-01 22:46:38] VERSION="7 (Core)"
[2026-02-01 22:46:38] ID="centos"
[2026-02-01 22:46:38] ID_LIKE="rhel fedora"
[2026-02-01 22:46:38] VERSION_ID="7"
[2026-02-01 22:46:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 22:46:38] ANSI_COLOR="0;31"
[2026-02-01 22:46:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 22:46:38] HOME_URL="https://www.centos.org/"
[2026-02-01 22:46:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 22:46:38] 
[2026-02-01 22:46:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 22:46:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 22:46:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 22:46:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 22:46:38] 
[2026-02-01 22:46:38] 2026-02-01 13:45:43,923 | INFO     | **************************************
[2026-02-01 22:46:38] 2026-02-01 13:45:44,426 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-01 22:46:38] 2026-02-01 13:45:44,434 | INFO     | sufficient remaining disk space (102516129792 B)
[2026-02-01 22:46:38] 2026-02-01 13:45:44,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | INFO     | update_server=False
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 22:46:38] 2026-02-01 13:45:44,435 | INFO     | aborting loop
[2026-02-01 22:46:38] 2026-02-01 13:45:45,226 | INFO     | all data control threads have been joined
[2026-02-01 22:46:38] 2026-02-01 13:45:45,232 | INFO     | all payload control threads have been joined
[2026-02-01 22:46:38] 2026-02-01 13:45:45,439 | INFO     | [job] retrieve thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:45,440 | INFO     | [job] job monitor thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:45,440 | INFO     | [job] queue monitor thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:45,531 | INFO     | [payload] failed_post thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:45,560 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:45,613 | INFO     | all job control threads have been joined
[2026-02-01 22:46:38] 2026-02-01 13:45:45,702 | INFO     | [data] copytool_in thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,181 | INFO     | [job] validate thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,231 | INFO     | [data] control thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,237 | INFO     | [payload] control thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,322 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,440 | INFO     | [data] copytool_out thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,578 | INFO     | [payload] validate_post thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,619 | INFO     | [job] control thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:46,717 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:48,441 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:45:55,152 | INFO     | job.realtimelogging is not enabled
[2026-02-01 22:46:38] 2026-02-01 13:45:56,157 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 22:46:38] 2026-02-01 13:46:14,884 | INFO     | PID=725829 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 22:46:38] 2026-02-01 13:46:14,884 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 22:46:38] 2026-02-01 13:46:14,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 22:46:38] 2026-02-01 13:46:14,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 22:46:38] 2026-02-01 13:46:31,757 | INFO     | [monitor] cgroup control has ended
[2026-02-01 22:46:38] 2026-02-01 13:46:32,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736570079040)>', '<ExcThread(monitor, started 139736207316736)>']
[2026-02-01 22:46:38] 2026-02-01 13:46:32,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 22:46:38] 2026-02-01 13:46:32,969 | INFO     | [monitor] control thread has ended
[2026-02-01 22:46:38] 2026-02-01 13:46:37,858 | INFO     | all workflow threads have been joined
[2026-02-01 22:46:38] 2026-02-01 13:46:37,858 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 22:46:38] 2026-02-01 13:46:37,858 | INFO     | traces error code: 0
[2026-02-01 22:46:38] 2026-02-01 13:46:37,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 22:46:38] 2026-02-01 13:46:37,934 [wrapper] ==== pilot stdout END ====
[2026-02-01 22:46:38] 2026-02-01 13:46:37,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 22:46:38] 2026-02-01 13:46:37,937 [wrapper] pilotpid: 725829
[2026-02-01 22:46:38] 2026-02-01 13:46:37,938 [wrapper] Pilot exit status: 0
[2026-02-01 22:46:38] 2026-02-01 13:46:37,946 [wrapper] pandaids: 6991269424
[2026-02-01 22:46:38] 2026-02-01 13:46:37,964 [wrapper] cleanup supervisor_pilot  735466 725830
[2026-02-01 22:46:38] 2026-02-01 13:46:37,966 [wrapper] Test setup, not cleaning
[2026-02-01 22:46:38] 2026-02-01 13:46:37,967 [wrapper] apfmon messages muted
[2026-02-01 22:46:38] 2026-02-01 13:46:37,969 [wrapper] ==== wrapper stdout END ====
[2026-02-01 22:46:38] 2026-02-01 13:46:37,970 [wrapper] ==== wrapper stderr END ====
[2026-02-01 22:46:38]  *** Error codes and diagnostics ***
[2026-02-01 22:46:38]     "exeErrorCode": 0,
[2026-02-01 22:46:38]     "exeErrorDiag": "",
[2026-02-01 22:46:38]     "pilotErrorCode": 0,
[2026-02-01 22:46:38]     "pilotErrorDiag": "",
[2026-02-01 22:46:38]  *** Listing of results directory ***
[2026-02-01 22:46:38] total 732156
[2026-02-01 22:46:38] -rwx------. 1 boinc boinc     36322 Jan 31 21:05 runpilot2-wrapper.sh
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc      5111 Jan 31 21:07 queuedata.json
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc    584422 Jan 31 21:07 pilot3.tar.gz
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc       100 Feb  1 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 22:46:38] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 20:53 run_atlas
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc       105 Feb  1 20:53 job.xml
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc     15845 Feb  1 20:53 start_atlas.sh
[2026-02-01 22:46:38] drwxrwx--x. 2 boinc boinc        68 Feb  1 20:53 shared
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc    597765 Feb  1 20:53 input.tar.gz
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc      9345 Feb  1 20:53 init_data.xml
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc 541799190 Feb  1 20:53 EVNT.48318024._000047.pool.root.1
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc         0 Feb  1 20:53 boinc_lockfile
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc      2522 Feb  1 20:53 pandaJob.out
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc   1010520 Feb  1 20:54 agis_schedconf.cvmfs.json
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc   1511668 Feb  1 20:54 agis_ddmendpoints.agis.ALL.json
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc       425 Feb  1 20:54 workernode_map.json
[2026-02-01 22:46:38] drwx------. 5 boinc boinc      4096 Feb  1 20:54 pilot3
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc 201467150 Feb  1 22:45 HITS.48318026._002315.pool.root.1
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc       530 Feb  1 22:45 boinc_task_state.xml
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc      1017 Feb  1 22:45 memory_monitor_summary.json
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc    307019 Feb  1 22:45 log.48318026._002315.job.log.tgz.1
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc      6306 Feb  1 22:45 heartbeat.json
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc        95 Feb  1 22:46 pilot_heartbeat.json
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc      8192 Feb  1 22:46 boinc_mmap_file
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc        27 Feb  1 22:46 wrapper_checkpoint.txt
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc      4816 Feb  1 22:46 pilotlog.txt
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc    959337 Feb  1 22:46 log.48318026._002315.job.log.1
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc       357 Feb  1 22:46 output.list
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc       620 Feb  1 22:46 runtime_log
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc   1280000 Feb  1 22:46 result.tar.gz
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc       640 Feb  1 22:46 tegLDmNuO68n9Rq4apOajLDm4fhM0noT9bVooX4SDmPYNKDmR7y0vn.diag
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc      8764 Feb  1 22:46 runtime_log.err
[2026-02-01 22:46:38] -rw-r--r--. 1 boinc boinc     21037 Feb  1 22:46 stderr.txt
[2026-02-01 22:46:38] HITS file was successfully produced:
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc 201467150 Feb  1 22:45 shared/HITS.pool.root.1
[2026-02-01 22:46:38]  *** Contents of shared directory: ***
[2026-02-01 22:46:38] total 727704
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc     15845 Feb  1 20:53 start_atlas.sh
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc    597765 Feb  1 20:53 input.tar.gz
[2026-02-01 22:46:38] -rw-r--r--. 2 boinc boinc 541799190 Feb  1 20:53 ATLAS.root_0
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc 201467150 Feb  1 22:45 HITS.pool.root.1
[2026-02-01 22:46:38] -rw-------. 1 boinc boinc   1280000 Feb  1 22:46 result.tar.gz
22:46:39 (721675): run_atlas exited; CPU time 37853.538079
22:46:39 (721675): called boinc_finish(0)

</stderr_txt>
]]>

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