Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:44 (751942): wrapper (7.7.26015): starting
04:00:44 (751942): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 04:00:44] Arguments: --nthreads 3
[2026-02-01 04:00:44] Threads: 3
[2026-02-01 04:00:44] Checking for CVMFS
[2026-02-01 04:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 04:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 04:00:46] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 04:00:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 04:00:46] 2.9.2.0 4027610 5202 85760 155734 3 50 24975425 36864000 0 130560 0 2399450 99.987 156608 11849 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 04:00:46] CVMFS is ok
[2026-02-01 04:00:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 04:00:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 04:00:46] Further information can be found at the LHC@home message board.
[2026-02-01 04:00:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 04:00:46] Checking for apptainer binary...
[2026-02-01 04:00:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 04:00:46] Running /usr/bin/apptainer --version
[2026-02-01 04:00:46] apptainer version 1.4.1-1.1
[2026-02-01 04:00:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 04:00:46] magicA246a
[2026-02-01 04:00:46] apptainer works
[2026-02-01 04:00:46] Set ATHENA_PROC_NUMBER=3
[2026-02-01 04:00:46] Set ATHENA_CORE_NUMBER=3
[2026-02-01 04:00:46] Starting ATLAS job with PandaID=6994616086
[2026-02-01 04:00:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 05:51:27]  *** The last 200 lines of the pilot log: ***
[2026-02-01 05:51:27] 2026-02-01 04:50:56,320 | INFO     | architecture information:
[2026-02-01 05:51:27] 2026-02-01 04:50:56,321 | INFO     | executing command: cat /etc/os-release
[2026-02-01 05:51:27] 2026-02-01 04:50:56,329 | INFO     | cat /etc/os-release:
[2026-02-01 05:51:27] NAME="CentOS Linux"
[2026-02-01 05:51:27] VERSION="7 (Core)"
[2026-02-01 05:51:27] ID="centos"
[2026-02-01 05:51:27] ID_LIKE="rhel fedora"
[2026-02-01 05:51:27] VERSION_ID="7"
[2026-02-01 05:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 05:51:27] ANSI_COLOR="0;31"
[2026-02-01 05:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 05:51:27] HOME_URL="https://www.centos.org/"
[2026-02-01 05:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 05:51:27] 
[2026-02-01 05:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 05:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 05:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 05:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 05:51:27] 
[2026-02-01 05:51:27] 2026-02-01 04:50:56,330 | INFO     | **************************************
[2026-02-01 05:51:27] 2026-02-01 04:50:56,832 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | INFO     | sufficient remaining disk space (276074332160 B)
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | INFO     | update_server=False
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 05:51:27] 2026-02-01 04:50:56,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 05:51:27] 2026-02-01 04:50:56,860 | WARNING  | process 760418 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 05:51:27] 2026-02-01 04:50:56,902 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 05:51:27] 2026-02-01 04:50:56,905 | INFO     | all payload control threads have been joined
[2026-02-01 05:51:27] 2026-02-01 04:50:56,955 | INFO     | number of running child processes to parent process 760418: 1
[2026-02-01 05:51:27] 2026-02-01 04:50:56,955 | INFO     | maximum number of monitored processes: 6
[2026-02-01 05:51:27] 2026-02-01 04:50:56,955 | INFO     | aborting job monitoring since job object (job id=6994616086) has expired
[2026-02-01 05:51:27] 2026-02-01 04:50:56,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 05:51:27] 2026-02-01 04:50:56,955 | INFO     | will abort loop
[2026-02-01 05:51:27] 2026-02-01 04:50:57,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 05:51:27] 2026-02-01 04:50:57,618 | INFO     | all data control threads have been joined
[2026-02-01 05:51:27] 2026-02-01 04:50:57,847 | INFO     | [job] queue monitor thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:57,847 | INFO     | [job] retrieve thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:57,910 | INFO     | [payload] control thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:57,959 | INFO     | [job] job monitor thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:58,022 | INFO     | all job control threads have been joined
[2026-02-01 05:51:27] 2026-02-01 04:50:58,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:58,198 | INFO     | [payload] validate_post thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:58,623 | INFO     | [data] control thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,028 | INFO     | [job] control thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,040 | INFO     | [job] validate thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,129 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,142 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,144 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,144 | INFO     | [data] copytool_out thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,269 | INFO     | [payload] failed_post thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:50:59,321 | INFO     | [data] copytool_in thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:51:00,849 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 05:51:27] 2026-02-01 04:51:02,990 | INFO     | [monitor] cgroup control has ended
[2026-02-01 05:51:27] 2026-02-01 04:51:04,781 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071027513152)>', '<ExcThread(monitor, started 140070543677184)>']
[2026-02-01 05:51:27] 2026-02-01 04:51:09,807 | INFO     | all workflow threads have been joined
[2026-02-01 05:51:27] 2026-02-01 04:51:09,807 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 05:51:27] 2026-02-01 04:51:09,807 | INFO     | traces error code: 0
[2026-02-01 05:51:27] 2026-02-01 04:51:09,807 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 05:51:27] 2026-02-01 04:51:27,252 | INFO     | PID=755983 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 05:51:27] 2026-02-01 04:51:27,253 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 05:51:27] 2026-02-01 04:51:27,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 05:51:27] 2026-02-01 04:51:27,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 05:51:27] 2026-02-01 04:51:27,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 05:51:27] 2026-02-01 04:51:27,253 | INFO     | [monitor] control thread has ended
[2026-02-01 05:51:27] 2026-02-01 04:51:27,304 [wrapper] ==== pilot stdout END ====
[2026-02-01 05:51:27] 2026-02-01 04:51:27,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 05:51:27] 2026-02-01 04:51:27,309 [wrapper] pilotpid: 755983
[2026-02-01 05:51:27] 2026-02-01 04:51:27,311 [wrapper] Pilot exit status: 0
[2026-02-01 05:51:27] 2026-02-01 04:51:27,319 [wrapper] pandaids: 6994616086
[2026-02-01 05:51:27] 2026-02-01 04:51:27,338 [wrapper] cleanup supervisor_pilot  767313 755984
[2026-02-01 05:51:27] 2026-02-01 04:51:27,340 [wrapper] Test setup, not cleaning
[2026-02-01 05:51:27] 2026-02-01 04:51:27,343 [wrapper] apfmon messages muted
[2026-02-01 05:51:27] 2026-02-01 04:51:27,345 [wrapper] ==== wrapper stdout END ====
[2026-02-01 05:51:27] 2026-02-01 04:51:27,347 [wrapper] ==== wrapper stderr END ====
[2026-02-01 05:51:27]  *** Error codes and diagnostics ***
[2026-02-01 05:51:27]     "exeErrorCode": 0,
[2026-02-01 05:51:27]     "exeErrorDiag": "",
[2026-02-01 05:51:27]     "pilotErrorCode": 0,
[2026-02-01 05:51:27]     "pilotErrorDiag": "",
[2026-02-01 05:51:27]  *** Listing of results directory ***
[2026-02-01 05:51:27] total 886200
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      5111 Jan 31 13:04 queuedata.json
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc    584422 Jan 31 13:04 pilot3.tar.gz
[2026-02-01 05:51:27] -rwx------ 1 boinc boinc     36322 Jan 31 13:04 runpilot2-wrapper.sh
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc       100 Feb  1 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 05:51:27] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 04:00 run_atlas
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc       105 Feb  1 04:00 job.xml
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc 646472125 Feb  1 04:00 EVNT.48431078._000078.pool.root.1
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc    597763 Feb  1 04:00 input.tar.gz
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:00 start_atlas.sh
[2026-02-01 05:51:27] drwxrwx--x 2 boinc boinc      4096 Feb  1 04:00 shared
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:00 boinc_setup_complete
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      6447 Feb  1 04:00 init_data.xml
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:00 boinc_lockfile
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      2558 Feb  1 04:00 pandaJob.out
[2026-02-01 05:51:27] -rw------- 1 boinc boinc   1010520 Feb  1 04:00 agis_schedconf.cvmfs.json
[2026-02-01 05:51:27] -rw------- 1 boinc boinc   1511668 Feb  1 04:00 agis_ddmendpoints.agis.ALL.json
[2026-02-01 05:51:27] -rw------- 1 boinc boinc       428 Feb  1 04:00 workernode_map.json
[2026-02-01 05:51:27] drwx------ 5 boinc boinc      4096 Feb  1 04:00 pilot3
[2026-02-01 05:51:27] -rw------- 1 boinc boinc        95 Feb  1 05:50 pilot_heartbeat.json
[2026-02-01 05:51:27] -rw------- 1 boinc boinc 254562384 Feb  1 05:50 HITS.48431080._003971.pool.root.1
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc       530 Feb  1 05:50 boinc_task_state.xml
[2026-02-01 05:51:27] -rw------- 1 boinc boinc      1029 Feb  1 05:50 memory_monitor_summary.json
[2026-02-01 05:51:27] -rw------- 1 boinc boinc    299624 Feb  1 05:50 log.48431080._003971.job.log.tgz.1
[2026-02-01 05:51:27] -rw------- 1 boinc boinc      6305 Feb  1 05:50 heartbeat.json
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc        27 Feb  1 05:51 wrapper_checkpoint.txt
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      8192 Feb  1 05:51 boinc_mmap_file
[2026-02-01 05:51:27] -rw------- 1 boinc boinc       746 Feb  1 05:51 pilotlog.txt
[2026-02-01 05:51:27] -rw------- 1 boinc boinc    951126 Feb  1 05:51 log.48431080._003971.job.log.1
[2026-02-01 05:51:27] -rw------- 1 boinc boinc       357 Feb  1 05:51 output.list
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc       620 Feb  1 05:51 runtime_log
[2026-02-01 05:51:27] -rw------- 1 boinc boinc   1269760 Feb  1 05:51 result.tar.gz
[2026-02-01 05:51:27] -rw------- 1 boinc boinc       661 Feb  1 05:51 tpzMDmZtO68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOkNKDmiGLPDo.diag
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      8916 Feb  1 05:51 runtime_log.err
[2026-02-01 05:51:27] -rw-r--r-- 1 boinc boinc      9602 Feb  1 05:51 stderr.txt
[2026-02-01 05:51:27] HITS file was successfully produced:
[2026-02-01 05:51:27] -rw------- 1 boinc boinc 254562384 Feb  1 05:50 shared/HITS.pool.root.1
[2026-02-01 05:51:27]  *** Contents of shared directory: ***
[2026-02-01 05:51:27] total 881772
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc 646472125 Feb  1 04:00 ATLAS.root_0
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc    597763 Feb  1 04:00 input.tar.gz
[2026-02-01 05:51:27] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:00 start_atlas.sh
[2026-02-01 05:51:27] -rw------- 1 boinc boinc 254562384 Feb  1 05:50 HITS.pool.root.1
[2026-02-01 05:51:27] -rw------- 1 boinc boinc   1269760 Feb  1 05:51 result.tar.gz
05:51:28 (751942): run_atlas exited; CPU time 19147.324392
05:51:28 (751942): called boinc_finish(0)

</stderr_txt>
]]>

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