Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:38:02 (378286): wrapper (7.7.26015): starting
11:38:02 (378286): wrapper: running run_atlas (--nthreads 9)
[2026-01-31 11:38:02] Arguments: --nthreads 9
[2026-01-31 11:38:02] Threads: 9
[2026-01-31 11:38:02] Checking for CVMFS
[2026-01-31 11:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 11:38:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 11:38:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 11:38:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 11:38:03] 2.13.3.0 73771 48810 305396 155720 0 58 36543429 40960000 18312 16776704 0 52154840 99.599 59722209 37800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-31 11:38:03] CVMFS is ok
[2026-01-31 11:38:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 11:38:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 11:38:03] Further information can be found at the LHC@home message board.
[2026-01-31 11:38:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 11:38:03] Checking for apptainer binary...
[2026-01-31 11:38:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 11:38:03] Running /usr/bin/apptainer --version
[2026-01-31 11:38:03] apptainer version 1.4.5-2.el9
[2026-01-31 11:38:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 11:38:04] c-210-31-3.aglt2.org
[2026-01-31 11:38:04] apptainer works
[2026-01-31 11:38:04] Set ATHENA_PROC_NUMBER=9
[2026-01-31 11:38:04] Set ATHENA_CORE_NUMBER=9
[2026-01-31 11:38:04] Starting ATLAS job with PandaID=6985836338
[2026-01-31 11:38:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 14:04:23]  *** The last 200 lines of the pilot log: ***
[2026-01-31 14:04:23] 2026-01-31 19:03:48,502 | INFO     | job 6985836338 has state=finished
[2026-01-31 14:04:23] 2026-01-31 19:03:48,503 | INFO     | preparing for final server update for job 6985836338 in state='finished'
[2026-01-31 14:04:23] 2026-01-31 19:03:48,503 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6985836338/jobReport.json
[2026-01-31 14:04:23] 2026-01-31 19:03:48,505 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-31 14:04:23] 2026-01-31 19:03:48,506 | INFO     | this job has now completed (state=finished)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,506 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,506 | INFO     | log transfer has been attempted: DONE
[2026-01-31 14:04:23] 2026-01-31 19:03:48,506 | INFO     | job 6985836338 has finished - writing final server update
[2026-01-31 14:04:23] 2026-01-31 19:03:48,506 | INFO     | total number of processed events: 400 (read)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,539 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6985836338/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,540 | INFO     | extracted standard info from prmon json
[2026-01-31 14:04:23] 2026-01-31 19:03:48,540 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 14:04:23] 2026-01-31 19:03:48,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 14:04:23] 2026-01-31 19:03:48,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 14:04:23] 2026-01-31 19:03:48,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 14:04:23] 2026-01-31 19:03:48,543 | INFO     | fitting pss+swap vs Time
[2026-01-31 14:04:23] 2026-01-31 19:03:48,543 | INFO     | sum of square deviations: 887863577.8309845
[2026-01-31 14:04:23] 2026-01-31 19:03:48,544 | INFO     | sum of deviations: -10915132423.253513
[2026-01-31 14:04:23] 2026-01-31 19:03:48,544 | INFO     | mean x: 1769881861.2676055
[2026-01-31 14:04:23] 2026-01-31 19:03:48,544 | INFO     | mean y: 2613880.9014084507
[2026-01-31 14:04:23] 2026-01-31 19:03:48,544 | INFO     | intersect: 21761018405.664814
[2026-01-31 14:04:23] 2026-01-31 19:03:48,544 | INFO     | chi2: 1.6336701781793188
[2026-01-31 14:04:23] 2026-01-31 19:03:48,545 | INFO     | sum of square deviations: 797356869.4306594
[2026-01-31 14:04:23] 2026-01-31 19:03:48,545 | INFO     | sum of deviations: -10356269159.160582
[2026-01-31 14:04:23] 2026-01-31 19:03:48,545 | INFO     | mean x: 1769881708.7810218
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | mean y: 2614822.861313869
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | intersect: 22990278262.82031
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | chi2: 1.63093823052102
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | current chi2=1.63093823052102 (change=0.16722761392042074 %)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | right removable region: 136
[2026-01-31 14:04:23] 2026-01-31 19:03:48,546 | INFO     | sum of square deviations: 797307702.2773724
[2026-01-31 14:04:23] 2026-01-31 19:03:48,547 | INFO     | sum of deviations: -31319469731.78103
[2026-01-31 14:04:23] 2026-01-31 19:03:48,547 | INFO     | mean x: 1769882013.7956204
[2026-01-31 14:04:23] 2026-01-31 19:03:48,547 | INFO     | mean y: 2647637.3649635036
[2026-01-31 14:04:23] 2026-01-31 19:03:48,547 | INFO     | intersect: 69526328396.45493
[2026-01-31 14:04:23] 2026-01-31 19:03:48,547 | INFO     | chi2: 0.23812437613097087
[2026-01-31 14:04:23] 2026-01-31 19:03:48,548 | INFO     | current chi2=0.23812437613097087 (change=85.42396260202571 %)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,548 | INFO     | sum of square deviations: 713140754.2651502
[2026-01-31 14:04:23] 2026-01-31 19:03:48,548 | INFO     | sum of deviations: -25990297213.734844
[2026-01-31 14:04:23] 2026-01-31 19:03:48,548 | INFO     | mean x: 1769882166.310606
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | mean y: 2637949.3106060605
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | intersect: 64505701700.17084
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | chi2: 0.23049805650232494
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | current chi2=0.23049805650232494 (change=3.202662303019065 %)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | left removable region: 20
[2026-01-31 14:04:23] 2026-01-31 19:03:48,549 | INFO     | sum of square deviations: 483976922.50862134
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | sum of deviations: -12630328738.620691
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | mean x: 1769882288.3534484
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | mean y: 2613039.5517241377
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | intersect: 46191168920.88738
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | chi2: 0.16884342698279997
[2026-01-31 14:04:23] 2026-01-31 19:03:48,550 | INFO     | current memory leak: -26.10 B/s (using 116 data points, chi2=0.17)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | could have reported an average CPU frequency of 2943 MHz (8 samples)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | ..............................
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . Timing measurements:
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . get job = 0 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . initial setup = 15 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . payload setup = 15 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . stage-in = 0 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . payload execution = 8676 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . stage-out = 2 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,551 | INFO     | . log creation = 0 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,556 | INFO     | ..............................
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | 
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | job summary report
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | --------------------------------------------------
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | PanDA job id: 6985836338
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | task id: 48318010
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | errors: (none)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 14:04:23] 2026-01-31 19:03:48,683 | INFO     | pilot state: finished 
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | transexitcode: 0
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | exeerrorcode: 0
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | exeerrordiag: 
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | exitcode: 0
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | exitmsg: OK
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | cpuconsumptiontime: 40129 s
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | nevents: 400
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | neventsw: 0
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | pid: 386891
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | pgrp: 386891
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | corecount: 9
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | event service: False
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | sizes: {0: 2277841, 1: 2278302, 8696: 2306526, 8699: 2315524, 8701: 2315774}
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | --------------------------------------------------
[2026-01-31 14:04:23] 2026-01-31 19:03:48,684 | INFO     | 
[2026-01-31 14:04:23] 2026-01-31 19:03:48,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,783 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,788 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 14:04:23] 2026-01-31 19:03:48,789 | INFO     | job 6985836338 has completed (purged errors)
[2026-01-31 14:04:23] 2026-01-31 19:03:48,789 | INFO     | overall cleanup function is called
[2026-01-31 14:04:23] 2026-01-31 19:03:48,972 | INFO     | PID=382342 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 14:04:23] 2026-01-31 19:03:48,972 | INFO     | .. there are 17 such processes running
[2026-01-31 14:04:23] 2026-01-31 19:03:49,796 | INFO     | --- collectZombieJob: --- 10, [386891]
[2026-01-31 14:04:23] 2026-01-31 19:03:49,796 | INFO     | zombie collector waiting for pid 386891
[2026-01-31 14:04:23] 2026-01-31 19:03:49,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 14:04:23] 2026-01-31 19:03:49,796 | INFO     | collected zombie processes
[2026-01-31 14:04:23] 2026-01-31 19:03:49,796 | INFO     | will attempt to kill all subprocesses of pid=386891
[2026-01-31 14:04:23] 2026-01-31 19:03:50,512 | INFO     | process IDs to be killed: [386891] (in reverse order)
[2026-01-31 14:04:23] 2026-01-31 19:03:50,928 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 14:04:23] 2026-01-31 19:03:50,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 14:04:23] 2026-01-31 19:03:50,959 | INFO     | did not find any defunct processes belonging to 386891
[2026-01-31 14:04:23] 2026-01-31 19:03:51,038 | INFO     | did not find any defunct processes belonging to 386891
[2026-01-31 14:04:23] 2026-01-31 19:03:51,038 | INFO     | ready for new job
[2026-01-31 14:04:23] 2026-01-31 19:03:51,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 14:04:23] 2026-01-31 19:03:51,043 | INFO     | **************************************
[2026-01-31 14:04:23] 2026-01-31 19:03:51,043 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 14:04:23] 2026-01-31 19:03:51,043 | INFO     | **************************************
[2026-01-31 14:04:23] 2026-01-31 19:03:51,043 | INFO     | 
[2026-01-31 14:04:23] 2026-01-31 19:03:51,046 | INFO     | architecture information:
[2026-01-31 14:04:23] 2026-01-31 19:03:51,046 | INFO     | executing command: cat /etc/os-release
[2026-01-31 14:04:23] 2026-01-31 19:03:51,202 | INFO     | cat /etc/os-release:
[2026-01-31 14:04:23] NAME="CentOS Linux"
[2026-01-31 14:04:23] VERSION="7 (Core)"
[2026-01-31 14:04:23] ID="centos"
[2026-01-31 14:04:23] ID_LIKE="rhel fedora"
[2026-01-31 14:04:23] VERSION_ID="7"
[2026-01-31 14:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 14:04:23] ANSI_COLOR="0;31"
[2026-01-31 14:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 14:04:23] HOME_URL="https://www.centos.org/"
[2026-01-31 14:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 14:04:23] 
[2026-01-31 14:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 14:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 14:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 14:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 14:04:23] 
[2026-01-31 14:04:23] 2026-01-31 19:03:51,202 | INFO     | **************************************
[2026-01-31 14:04:23] 2026-01-31 19:03:51,706 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-31 14:04:23] 2026-01-31 19:03:51,828 | INFO     | sufficient remaining disk space (72466038784 B)
[2026-01-31 14:04:23] 2026-01-31 19:03:51,829 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 14:04:23] 2026-01-31 19:03:51,829 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 14:04:23] 2026-01-31 19:03:51,829 | INFO     | update_server=False
[2026-01-31 14:04:23] 2026-01-31 19:03:51,829 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 14:04:23] 2026-01-31 19:03:51,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 14:04:23] 2026-01-31 19:03:51,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 14:04:23] 2026-01-31 19:03:51,868 | INFO     | aborting loop
[2026-01-31 14:04:23] 2026-01-31 19:03:52,042 | INFO     | all job control threads have been joined
[2026-01-31 14:04:23] 2026-01-31 19:03:52,610 | INFO     | all data control threads have been joined
[2026-01-31 14:04:23] 2026-01-31 19:03:52,812 | INFO     | all payload control threads have been joined
[2026-01-31 14:04:23] 2026-01-31 19:03:52,835 | INFO     | [job] retrieve thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:52,874 | INFO     | [job] job monitor thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:52,875 | INFO     | [payload] validate_post thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,048 | INFO     | [job] control thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,070 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,386 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,386 | INFO     | [job] validate thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,572 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,616 | INFO     | [data] control thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 14:04:23] 2026-01-31 19:03:53,818 | INFO     | [payload] control thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,844 | INFO     | [data] copytool_out thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:53,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:54,039 | INFO     | [data] copytool_in thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:54,400 | INFO     | [payload] failed_post thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:54,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 14:04:23] 2026-01-31 19:03:54,775 | INFO     | [job] queue monitor thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:03:58,563 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 14:04:23] 2026-01-31 19:04:00,493 | INFO     | [monitor] cgroup control has ended
[2026-01-31 14:04:23] 2026-01-31 19:04:00,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638604207936)>', '<ExcThread(monitor, started 140638259488512)>']
[2026-01-31 14:04:23] 2026-01-31 19:04:05,792 | INFO     | all workflow threads have been joined
[2026-01-31 14:04:23] 2026-01-31 19:04:05,792 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 14:04:23] 2026-01-31 19:04:05,792 | INFO     | traces error code: 0
[2026-01-31 14:04:23] 2026-01-31 19:04:05,792 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 14:04:23] 2026-01-31 19:04:21,992 | INFO     | PID=382342 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 14:04:23] 2026-01-31 19:04:21,993 | INFO     | .. there are 17 such processes running
[2026-01-31 14:04:23] 2026-01-31 19:04:21,993 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 14:04:23] 2026-01-31 19:04:21,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 14:04:23] 2026-01-31 19:04:21,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 14:04:23] 2026-01-31 19:04:21,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 14:04:23] 2026-01-31 19:04:21,994 | INFO     | [monitor] control thread has ended
[2026-01-31 14:04:23] 2026-01-31 19:04:22,500 [wrapper] ==== pilot stdout END ====
[2026-01-31 14:04:23] 2026-01-31 19:04:22,537 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 14:04:23] 2026-01-31 19:04:22,555 [wrapper] pilotpid: 382342
[2026-01-31 14:04:23] 2026-01-31 19:04:22,577 [wrapper] Pilot exit status: 0
[2026-01-31 14:04:23] 2026-01-31 19:04:22,664 [wrapper] pandaids: 6985836338
[2026-01-31 14:04:23] 2026-01-31 19:04:22,830 [wrapper] cleanup supervisor_pilot  589237 382343
[2026-01-31 14:04:23] 2026-01-31 19:04:22,844 [wrapper] Test setup, not cleaning
[2026-01-31 14:04:23] 2026-01-31 19:04:22,860 [wrapper] apfmon messages muted
[2026-01-31 14:04:23] 2026-01-31 19:04:22,887 [wrapper] ==== wrapper stdout END ====
[2026-01-31 14:04:23] 2026-01-31 19:04:22,903 [wrapper] ==== wrapper stderr END ====
[2026-01-31 14:04:23]  *** Error codes and diagnostics ***
[2026-01-31 14:04:23]     "exeErrorCode": 0,
[2026-01-31 14:04:23]     "exeErrorDiag": "",
[2026-01-31 14:04:23]     "pilotErrorCode": 0,
[2026-01-31 14:04:23]     "pilotErrorDiag": "",
[2026-01-31 14:04:23]  *** Listing of results directory ***
[2026-01-31 14:04:23] total 670532
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 07:16 pilot3.tar.gz
[2026-01-31 14:04:23] -rwx------. 1 boincer umatlas     36322 Jan 30 08:00 runpilot2-wrapper.sh
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 08:00 queuedata.json
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas       100 Jan 31 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 14:04:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 31 11:38 run_atlas
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas       105 Jan 31 11:38 job.xml
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas 492681379 Jan 31 11:38 EVNT.48318008._000121.pool.root.1
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 11:38 start_atlas.sh
[2026-01-31 14:04:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 31 11:38 shared
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas    597761 Jan 31 11:38 input.tar.gz
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas         0 Jan 31 11:38 boinc_lockfile
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas      2524 Jan 31 11:38 pandaJob.out
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas        57 Jan 31 11:38 setup.sh.local
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas   1010520 Jan 31 11:38 agis_schedconf.cvmfs.json
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas   1511668 Jan 31 11:38 agis_ddmendpoints.agis.ALL.json
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas       442 Jan 31 11:38 workernode_map.json
[2026-01-31 14:04:23] drwx------. 5 boincer umatlas      4096 Jan 31 11:38 pilot3
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas      6842 Jan 31 14:02 init_data.xml
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas 186758244 Jan 31 14:02 HITS.48318010._006371.pool.root.1
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas       530 Jan 31 14:02 boinc_task_state.xml
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas      1037 Jan 31 14:03 memory_monitor_summary.json
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas    430268 Jan 31 14:03 log.48318010._006371.job.log.tgz.1
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas      6387 Jan 31 14:03 heartbeat.json
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 31 14:04 boinc_mmap_file
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas        27 Jan 31 14:04 wrapper_checkpoint.txt
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas        95 Jan 31 14:04 pilot_heartbeat.json
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas       822 Jan 31 14:04 pilotlog.txt
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas   1189038 Jan 31 14:04 log.48318010._006371.job.log.1
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas       357 Jan 31 14:04 output.list
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas       620 Jan 31 14:04 runtime_log
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas   1638400 Jan 31 14:04 result.tar.gz
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas      9351 Jan 31 14:04 runtime_log.err
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas       654 Jan 31 14:04 bTUMDmuH358n9Rq4apOajLDm4fhM0noT9bVooX4SDmU3KKDmpz4dPn.diag
[2026-01-31 14:04:23] -rw-r--r--. 1 boincer umatlas     21374 Jan 31 14:04 stderr.txt
[2026-01-31 14:04:23] HITS file was successfully produced:
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas 186758244 Jan 31 14:02 shared/HITS.pool.root.1
[2026-01-31 14:04:23]  *** Contents of shared directory: ***
[2026-01-31 14:04:23] total 665728
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas 492681379 Jan 31 11:38 ATLAS.root_0
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 31 11:38 start_atlas.sh
[2026-01-31 14:04:23] -rw-r--r--. 2 boincer umatlas    597761 Jan 31 11:38 input.tar.gz
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas 186758244 Jan 31 14:02 HITS.pool.root.1
[2026-01-31 14:04:23] -rw-------. 1 boincer umatlas   1638400 Jan 31 14:04 result.tar.gz
14:04:25 (378286): run_atlas exited; CPU time 40333.509867
14:04:25 (378286): called boinc_finish(0)

</stderr_txt>
]]>

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