Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:46:08 (3317152): wrapper (7.7.26015): starting
09:46:08 (3317152): wrapper: running run_atlas (--nthreads 4)
[2026-02-01 09:46:08] Arguments: --nthreads 4
[2026-02-01 09:46:08] Threads: 4
[2026-02-01 09:46:08] Checking for CVMFS
[2026-02-01 09:46:08] No cvmfs_config command found, will try listing directly
[2026-02-01 09:46:08] CVMFS is ok
[2026-02-01 09:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 09:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 09:46:08] Further information can be found at the LHC@home message board.
[2026-02-01 09:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 09:46:08] Checking for apptainer binary...
[2026-02-01 09:46:08] which: no apptainer in ((null))
[2026-02-01 09:46:08] apptainer is not installed, using version from CVMFS
[2026-02-01 09:46:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 09:46:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-02-01 09:46:08] apptainer works
[2026-02-01 09:46:08] Set ATHENA_PROC_NUMBER=4
[2026-02-01 09:46:08] Set ATHENA_CORE_NUMBER=4
[2026-02-01 09:46:08] Starting ATLAS job with PandaID=6991147967
[2026-02-01 09:46:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 13:05:32]  *** The last 200 lines of the pilot log: ***
[2026-02-01 13:05:32] 2026-02-01 11:52:13,011 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 13:05:32] 2026-02-01 11:52:13,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 13:05:32] 2026-02-01 11:52:13,011 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 13:05:32] 2026-02-01 11:52:13,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 13:05:32] 2026-02-01 11:52:13,015 | INFO     | fitting pss+swap vs Time
[2026-02-01 13:05:32] 2026-02-01 11:52:13,015 | INFO     | sum of square deviations: 1900284932.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,016 | INFO     | sum of deviations: 7969076722.000004
[2026-02-01 13:05:32] 2026-02-01 11:52:13,017 | INFO     | mean x: 1769941172.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,017 | INFO     | mean y: 2307504.5191256832
[2026-02-01 13:05:32] 2026-02-01 11:52:13,017 | INFO     | intersect: -7420156756.274478
[2026-02-01 13:05:32] 2026-02-01 11:52:13,017 | INFO     | chi2: 2.1095934933379317
[2026-02-01 13:05:32] 2026-02-01 11:52:13,018 | INFO     | sum of square deviations: 1748737904.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | sum of deviations: 18854683705.500004
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | mean x: 1769941019.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | mean y: 2318208.0056179776
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | intersect: -19080974956.846527
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | chi2: 1.341041996937573
[2026-02-01 13:05:32] 2026-02-01 11:52:13,019 | INFO     | current chi2=1.341041996937573 (change=36.43126027964316 %)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,020 | INFO     | sum of square deviations: 1605470102.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | sum of deviations: 18288841026.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | mean x: 1769940867.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | mean y: 2317605.543352601
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | intersect: -20160105289.56928
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | chi2: 1.3420641496118002
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | current chi2=1.3420641496118002 (change=-0.07622078030079019 %)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,021 | INFO     | right removable region: 172
[2026-02-01 13:05:32] 2026-02-01 11:52:13,022 | INFO     | sum of square deviations: 1748737904.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | sum of deviations: -15018467515.499996
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | mean x: 1769941324.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | mean y: 2330307.2078651683
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | intersect: 15202896508.66192
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | chi2: 0.7954618746171135
[2026-02-01 13:05:32] 2026-02-01 11:52:13,023 | INFO     | current chi2=0.7954618746171135 (change=62.29312058796297 %)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,024 | INFO     | sum of square deviations: 1605470102.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | sum of deviations: -14408915408.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | mean x: 1769941477.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | mean y: 2329654.7514450867
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | intersect: 15887357340.681892
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | chi2: 0.7957877583946218
[2026-02-01 13:05:32] 2026-02-01 11:52:13,025 | INFO     | current chi2=0.7957877583946218 (change=-0.04096786884540095 %)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,026 | INFO     | left removable region: 20
[2026-02-01 13:05:32] 2026-02-01 11:52:13,026 | INFO     | sum of square deviations: 1088905998.0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | sum of deviations: -1525704153.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | mean x: 1769941446.5
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | mean y: 2339191.9013157897
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | intersect: 2482265853.465033
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | chi2: 0.003727896381922937
[2026-02-01 13:05:32] 2026-02-01 11:52:13,027 | INFO     | current memory leak: -1.40 B/s (using 152 data points, chi2=0.00)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | could have reported an average CPU frequency of 2739 MHz (10 samples)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | ..............................
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | . Timing measurements:
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | . get job = 0 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | . initial setup = 8 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | . payload setup = 9 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,028 | INFO     | . stage-in = 0 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,029 | INFO     | . payload execution = 11110 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,029 | INFO     | . stage-out = 1 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,029 | INFO     | . log creation = 0 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,029 | INFO     | ..............................
[2026-02-01 13:05:32] 2026-02-01 11:52:13,127 | INFO     | 
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | job summary report
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | --------------------------------------------------
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | PanDA job id: 6991147967
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | task id: 48318042
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | errors: (none)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | pilot state: finished 
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | transexitcode: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | exeerrorcode: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | exeerrordiag: 
[2026-02-01 13:05:32] 2026-02-01 11:52:13,128 | INFO     | exitcode: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | exitmsg: OK
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | cpuconsumptiontime: 42470 s
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | nevents: 400
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | neventsw: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | pid: 3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | pgrp: 3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | corecount: 4
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | event service: False
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | sizes: {0: 2277196, 1: 2278325, 12: 2278325, 11123: 2308047, 11124: 2317067, 11128: 2317445}
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | --------------------------------------------------
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | 
[2026-02-01 13:05:32] 2026-02-01 11:52:13,129 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-02-01 13:05:32] 2026-02-01 11:52:13,163 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,163 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,163 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | job 6991147967 has completed (purged errors)
[2026-02-01 13:05:32] 2026-02-01 11:52:13,165 | INFO     | overall cleanup function is called
[2026-02-01 13:05:32] 2026-02-01 11:52:14,175 | INFO     | --- collectZombieJob: --- 10, [3367496]
[2026-02-01 13:05:32] 2026-02-01 11:52:14,175 | INFO     | zombie collector waiting for pid 3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:14,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 13:05:32] 2026-02-01 11:52:14,176 | INFO     | collected zombie processes
[2026-02-01 13:05:32] 2026-02-01 11:52:14,176 | INFO     | will attempt to kill all subprocesses of pid=3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:15,332 | WARNING  | process 3367496 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 13:05:32] 2026-02-01 11:52:16,218 | INFO     | process IDs to be killed: [3367496] (in reverse order)
[2026-02-01 13:05:32] 2026-02-01 11:52:16,485 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 13:05:32] 2026-02-01 11:52:16,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 13:05:32] 2026-02-01 11:52:16,576 | INFO     | did not find any defunct processes belonging to 3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:16,579 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 13:05:32] 2026-02-01 11:52:16,648 | INFO     | did not find any defunct processes belonging to 3367496
[2026-02-01 13:05:32] 2026-02-01 11:52:16,649 | INFO     | ready for new job
[2026-02-01 13:05:32] 2026-02-01 11:52:16,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 13:05:32] 2026-02-01 11:52:16,651 | INFO     | **************************************
[2026-02-01 13:05:32] 2026-02-01 11:52:16,652 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 13:05:32] 2026-02-01 11:52:16,652 | INFO     | **************************************
[2026-02-01 13:05:32] 2026-02-01 11:52:16,652 | INFO     | 
[2026-02-01 13:05:32] 2026-02-01 11:52:16,663 | INFO     | architecture information:
[2026-02-01 13:05:32] 2026-02-01 11:52:16,663 | INFO     | executing command: cat /etc/os-release
[2026-02-01 13:05:32] 2026-02-01 11:52:16,688 | INFO     | cat /etc/os-release:
[2026-02-01 13:05:32] NAME="CentOS Linux"
[2026-02-01 13:05:32] VERSION="7 (Core)"
[2026-02-01 13:05:32] ID="centos"
[2026-02-01 13:05:32] ID_LIKE="rhel fedora"
[2026-02-01 13:05:32] VERSION_ID="7"
[2026-02-01 13:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 13:05:32] ANSI_COLOR="0;31"
[2026-02-01 13:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 13:05:32] HOME_URL="https://www.centos.org/"
[2026-02-01 13:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 13:05:32] 
[2026-02-01 13:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 13:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 13:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 13:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 13:05:32] 
[2026-02-01 13:05:32] 2026-02-01 11:52:16,688 | INFO     | **************************************
[2026-02-01 13:05:32] 2026-02-01 11:52:17,191 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-02-01 13:05:32] 2026-02-01 11:52:17,219 | INFO     | sufficient remaining disk space (3249705844736 B)
[2026-02-01 13:05:32] 2026-02-01 11:52:17,220 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 13:05:32] 2026-02-01 11:52:17,220 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 13:05:32] 2026-02-01 11:52:17,220 | INFO     | update_server=False
[2026-02-01 13:05:32] 2026-02-01 11:52:17,220 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 13:05:32] 2026-02-01 11:52:17,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 13:05:32] 2026-02-01 11:52:17,474 | INFO     | number of running child processes to parent process 3367496: 1
[2026-02-01 13:05:32] 2026-02-01 11:52:17,474 | INFO     | maximum number of monitored processes: 6
[2026-02-01 13:05:32] 2026-02-01 11:52:17,474 | INFO     | aborting job monitoring since job object (job id=6991147967) has expired
[2026-02-01 13:05:32] 2026-02-01 11:52:17,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:05:32] 2026-02-01 11:52:17,474 | INFO     | will abort loop
[2026-02-01 13:05:32] 2026-02-01 11:52:17,748 | INFO     | all data control threads have been joined
[2026-02-01 13:05:32] 2026-02-01 11:52:17,959 | INFO     | all payload control threads have been joined
[2026-02-01 13:05:32] 2026-02-01 11:52:18,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 13:05:32] 2026-02-01 11:52:18,226 | INFO     | [job] retrieve thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,249 | INFO     | [job] validate thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,443 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 13:05:32] 2026-02-01 11:52:18,486 | INFO     | [job] job monitor thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,523 | INFO     | [payload] validate_post thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,753 | INFO     | [data] control thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,817 | INFO     | all job control threads have been joined
[2026-02-01 13:05:32] 2026-02-01 11:52:18,881 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,937 | INFO     | [data] copytool_in thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:18,964 | INFO     | [payload] control thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,134 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,143 | INFO     | [job] queue monitor thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,226 | INFO     | [data] copytool_out thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,349 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,534 | INFO     | [payload] failed_post thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:19,822 | INFO     | [job] control thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:22,451 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:27,585 | INFO     | job.realtimelogging is not enabled
[2026-02-01 13:05:32] 2026-02-01 11:52:28,594 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 13:05:32] 2026-02-01 11:52:45,724 | INFO     | PID=3335820 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-01 13:05:32] 2026-02-01 11:52:45,724 | INFO     | .. there are 10 such processes running
[2026-02-01 13:05:32] 2026-02-01 11:52:45,725 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 13:05:32] 2026-02-01 11:52:45,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 13:05:32] 2026-02-01 11:52:45,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 13:05:32] 2026-02-01 11:52:50,980 | INFO     | [monitor] cgroup control has ended
[2026-02-01 13:05:32] 2026-02-01 11:52:51,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23291812955968)>', '<ExcThread(monitor, started 23291571214080)>']
[2026-02-01 13:05:32] 2026-02-01 11:52:52,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 13:05:32] 2026-02-01 11:52:52,761 | INFO     | [monitor] control thread has ended
[2026-02-01 13:05:32] 2026-02-01 11:52:56,859 | INFO     | all workflow threads have been joined
[2026-02-01 13:05:32] 2026-02-01 11:52:56,860 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 13:05:32] 2026-02-01 11:52:56,860 | INFO     | traces error code: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:56,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 13:05:32] 2026-02-01 11:52:57,047 [wrapper] ==== pilot stdout END ====
[2026-02-01 13:05:32] 2026-02-01 11:52:57,051 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 13:05:32] 2026-02-01 11:52:57,055 [wrapper] pilotpid: 3335820
[2026-02-01 13:05:32] 2026-02-01 11:52:57,059 [wrapper] Pilot exit status: 0
[2026-02-01 13:05:32] 2026-02-01 11:52:57,075 [wrapper] pandaids: 6991147967
[2026-02-01 13:05:32] 2026-02-01 11:52:57,259 [wrapper] cleanup supervisor_pilot 3599880 3335821
[2026-02-01 13:05:32] 2026-02-01 11:52:57,264 [wrapper] Test setup, not cleaning
[2026-02-01 13:05:32] 2026-02-01 11:52:57,268 [wrapper] apfmon messages muted
[2026-02-01 13:05:32] 2026-02-01 11:52:57,272 [wrapper] ==== wrapper stdout END ====
[2026-02-01 13:05:32] 2026-02-01 11:52:57,276 [wrapper] ==== wrapper stderr END ====
[2026-02-01 13:05:32]  *** Error codes and diagnostics ***
[2026-02-01 13:05:32]     "exeErrorCode": 0,
[2026-02-01 13:05:32]     "exeErrorDiag": "",
[2026-02-01 13:05:32]     "pilotErrorCode": 0,
[2026-02-01 13:05:32]     "pilotErrorDiag": "",
[2026-02-01 13:05:32]  *** Listing of results directory ***
[2026-02-01 13:05:32] total 682496
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc    584422 Jan 31 10:27 pilot3.tar.gz
[2026-02-01 13:05:32] -rwx------ 1 boinc boinc     36322 Jan 31 10:28 runpilot2-wrapper.sh
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc      5111 Jan 31 10:30 queuedata.json
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc       100 Feb  1 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 13:05:32] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 09:46 run_atlas
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc       105 Feb  1 09:46 job.xml
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc      6689 Feb  1 09:46 init_data.xml
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc 503354059 Feb  1 09:46 EVNT.48318040._000096.pool.root.1
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc     15845 Feb  1 09:46 start_atlas.sh
[2026-02-01 13:05:32] drwxrwx--x 2 boinc boinc      4096 Feb  1 09:46 shared
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc    597767 Feb  1 09:46 input.tar.gz
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc         0 Feb  1 09:46 boinc_lockfile
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc      2536 Feb  1 09:46 pandaJob.out
[2026-02-01 13:05:32] -rw------- 1 boinc boinc   1010520 Feb  1 09:46 agis_schedconf.cvmfs.json
[2026-02-01 13:05:32] -rw------- 1 boinc boinc       443 Feb  1 09:46 workernode_map.json
[2026-02-01 13:05:32] drwx------ 5 boinc boinc      4096 Feb  1 09:46 pilot3
[2026-02-01 13:05:32] -rw------- 1 boinc boinc 187699942 Feb  1 12:51 HITS.48318042._005055.pool.root.1
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc       529 Feb  1 12:51 boinc_task_state.xml
[2026-02-01 13:05:32] -rw------- 1 boinc boinc      1040 Feb  1 12:52 memory_monitor_summary.json
[2026-02-01 13:05:32] -rw------- 1 boinc boinc   1511668 Feb  1 12:52 agis_ddmendpoints.agis.ALL.json
[2026-02-01 13:05:32] -rw------- 1 boinc boinc    390166 Feb  1 12:52 log.48318042._005055.job.log.tgz.1
[2026-02-01 13:05:32] -rw------- 1 boinc boinc      6351 Feb  1 12:52 heartbeat.json
[2026-02-01 13:05:32] -rw------- 1 boinc boinc        95 Feb  1 12:52 pilot_heartbeat.json
[2026-02-01 13:05:32] -rw------- 1 boinc boinc      5194 Feb  1 12:52 pilotlog.txt
[2026-02-01 13:05:32] -rw------- 1 boinc boinc   1546122 Feb  1 12:52 log.48318042._005055.job.log.1
[2026-02-01 13:05:32] -rw------- 1 boinc boinc       357 Feb  1 12:52 output.list
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc       620 Feb  1 12:52 runtime_log
[2026-02-01 13:05:32] -rw------- 1 boinc boinc   1955840 Feb  1 12:52 result.tar.gz
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc      9205 Feb  1 12:52 runtime_log.err
[2026-02-01 13:05:32] -rw------- 1 boinc boinc       666 Feb  1 12:52 8mmMDmOSM68n9Rq4apOajLDm4fhM0noT9bVooX4SDmqINKDmOmb1Po.diag
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc        26 Feb  1 13:05 wrapper_checkpoint.txt
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc      8192 Feb  1 13:05 boinc_mmap_file
[2026-02-01 13:05:32] -rw-r--r-- 1 boinc boinc     20852 Feb  1 13:05 stderr.txt
[2026-02-01 13:05:32] HITS file was successfully produced:
[2026-02-01 13:05:32] -rw------- 1 boinc boinc 187699942 Feb  1 12:51 shared/HITS.pool.root.1
[2026-02-01 13:05:32]  *** Contents of shared directory: ***
[2026-02-01 13:05:32] total 677384
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc 503354059 Feb  1 09:46 ATLAS.root_0
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc     15845 Feb  1 09:46 start_atlas.sh
[2026-02-01 13:05:32] -rw-r--r-- 2 boinc boinc    597767 Feb  1 09:46 input.tar.gz
[2026-02-01 13:05:32] -rw------- 1 boinc boinc 187699942 Feb  1 12:51 HITS.pool.root.1
[2026-02-01 13:05:32] -rw------- 1 boinc boinc   1955840 Feb  1 12:52 result.tar.gz
13:05:33 (3317152): run_atlas exited; CPU time 43272.300514
13:05:33 (3317152): called boinc_finish(0)

</stderr_txt>
]]>

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