Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:22:30 (2339896): wrapper (7.7.26015): starting
07:22:30 (2339896): wrapper: running run_atlas (--nthreads 12)
[2026-02-02 07:22:30] Arguments: --nthreads 12
[2026-02-02 07:22:30] Threads: 12
[2026-02-02 07:22:30] Checking for CVMFS
[2026-02-02 07:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-02 07:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-02 07:22:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-02 07:22:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-02 07:22:32] 2.13.3.0 621116 5813 63892 155777 0 188 2250804 4096000 17284 130560 0 41656856 99.999 218256 736 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-02-02 07:22:32] CVMFS is ok
[2026-02-02 07:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-02 07:22:32] Checking for apptainer binary...
[2026-02-02 07:22:32] apptainer is not installed, using version from CVMFS
[2026-02-02 07:22:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-02 07:22:34] epyc7v12
[2026-02-02 07:22:34] apptainer works
[2026-02-02 07:22:34] Set ATHENA_PROC_NUMBER=12
[2026-02-02 07:22:34] Set ATHENA_CORE_NUMBER=12
[2026-02-02 07:22:34] Starting ATLAS job with PandaID=6978419496
[2026-02-02 07:22:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31418/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-02 09:15:36]  *** The last 200 lines of the pilot log: ***
[2026-02-02 09:15:36] 2026-02-02 09:14:34,283 | INFO     | mean y: 2553321.3076923075
[2026-02-02 09:15:36] 2026-02-02 09:14:34,283 | INFO     | intersect: -163747805965.0688
[2026-02-02 09:15:36] 2026-02-02 09:14:34,283 | INFO     | chi2: 2.3340009678903217
[2026-02-02 09:15:36] 2026-02-02 09:14:34,285 | INFO     | current chi2=2.3340009678903217 (change=0.0847756829862948 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,285 | INFO     | right removable region: 103
[2026-02-02 09:15:36] 2026-02-02 09:14:34,285 | INFO     | sum of square deviations: 348769330.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,292 | INFO     | sum of deviations: 8818922652.5
[2026-02-02 09:15:36] 2026-02-02 09:14:34,293 | INFO     | mean x: 1770020478.5
[2026-02-02 09:15:36] 2026-02-02 09:14:34,293 | INFO     | mean y: 2630967.778846154
[2026-02-02 09:15:36] 2026-02-02 09:14:34,293 | INFO     | intersect: -44753809322.52001
[2026-02-02 09:15:36] 2026-02-02 09:14:34,293 | INFO     | chi2: 0.14855024897850902
[2026-02-02 09:15:36] 2026-02-02 09:14:34,293 | INFO     | current chi2=0.14855024897850902 (change=93.64077750899483 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,294 | INFO     | sum of square deviations: 300842850.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,294 | INFO     | sum of deviations: 1816286041.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,294 | INFO     | mean x: 1770020631.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,294 | INFO     | mean y: 2653048.1414141413
[2026-02-02 09:15:36] 2026-02-02 09:14:34,295 | INFO     | intersect: -10683536649.793278
[2026-02-02 09:15:36] 2026-02-02 09:14:34,295 | INFO     | chi2: 0.0019252985747491974
[2026-02-02 09:15:36] 2026-02-02 09:14:34,295 | INFO     | current chi2=0.0019252985747491974 (change=98.70394119970292 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,295 | INFO     | sum of square deviations: 257521107.5
[2026-02-02 09:15:36] 2026-02-02 09:14:34,296 | INFO     | sum of deviations: 942348770.5000002
[2026-02-02 09:15:36] 2026-02-02 09:14:34,296 | INFO     | mean x: 1770020783.5
[2026-02-02 09:15:36] 2026-02-02 09:14:34,297 | INFO     | mean y: 2656116.4787234045
[2026-02-02 09:15:36] 2026-02-02 09:14:34,297 | INFO     | intersect: -6474393183.608929
[2026-02-02 09:15:36] 2026-02-02 09:14:34,297 | INFO     | chi2: 0.0003871356313320468
[2026-02-02 09:15:36] 2026-02-02 09:14:34,297 | INFO     | current chi2=0.0003871356313320468 (change=79.89217691170431 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,298 | INFO     | sum of square deviations: 218571540.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,298 | INFO     | sum of deviations: 577974023.9999999
[2026-02-02 09:15:36] 2026-02-02 09:14:34,300 | INFO     | mean x: 1770020936.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,300 | INFO     | mean y: 2657525.2359550563
[2026-02-02 09:15:36] 2026-02-02 09:14:34,300 | INFO     | intersect: -4677851762.2228155
[2026-02-02 09:15:36] 2026-02-02 09:14:34,300 | INFO     | chi2: 8.852698351870963e-05
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | current chi2=8.852698351870963e-05 (change=77.13282468624544 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | sum of square deviations: 183761585.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | sum of deviations: 440501282.50000006
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | mean x: 1770021088.5
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | mean y: 2658127.5595238097
[2026-02-02 09:15:36] 2026-02-02 09:14:34,301 | INFO     | intersect: -4240320945.2227235
[2026-02-02 09:15:36] 2026-02-02 09:14:34,302 | INFO     | chi2: 7.84649864065386e-05
[2026-02-02 09:15:36] 2026-02-02 09:14:34,302 | INFO     | current chi2=7.84649864065386e-05 (change=11.366022778856443 %)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,304 | INFO     | left removable region: 50
[2026-02-02 09:15:36] 2026-02-02 09:14:34,304 | INFO     | sum of square deviations: 46147842.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,304 | INFO     | sum of deviations: 46696109.99999999
[2026-02-02 09:15:36] 2026-02-02 09:14:34,305 | INFO     | mean x: 1770021668.0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,305 | INFO     | mean y: 2658803.7924528304
[2026-02-02 09:15:36] 2026-02-02 09:14:34,305 | INFO     | intersect: -1788391935.076582
[2026-02-02 09:15:36] 2026-02-02 09:14:34,305 | INFO     | chi2: 8.004535099558886e-06
[2026-02-02 09:15:36] 2026-02-02 09:14:34,307 | INFO     | current memory leak: 1.01 B/s (using 53 data points, chi2=0.00)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | could have reported an average CPU frequency of 2397 MHz (7 samples)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | ..............................
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . Timing measurements:
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . get job = 0 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . initial setup = 16 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . payload setup = 16 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . stage-in = 0 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . payload execution = 6647 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,308 | INFO     | . stage-out = 1 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,309 | INFO     | . log creation = 0 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,309 | INFO     | ..............................
[2026-02-02 09:15:36] 2026-02-02 09:14:34,452 | INFO     | 
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | job summary report
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | --------------------------------------------------
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | PanDA job id: 6978419496
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | task id: 48310826
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | errors: (none)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | pilot state: finished 
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | transexitcode: 0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | exeerrorcode: 0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | exeerrordiag: 
[2026-02-02 09:15:36] 2026-02-02 09:14:34,453 | INFO     | exitcode: 0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | exitmsg: OK
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | cpuconsumptiontime: 41357 s
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | nevents: 400
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | neventsw: 0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | pid: 2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | pgrp: 2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | corecount: 12
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | event service: False
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | sizes: {0: 2277864, 1: 2278325, 2: 2278353, 6667: 2305687, 6669: 2314731, 6671: 2314787, 6672: 2315109}
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | --------------------------------------------------
[2026-02-02 09:15:36] 2026-02-02 09:14:34,454 | INFO     | 
[2026-02-02 09:15:36] 2026-02-02 09:14:34,455 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-02-02 09:15:36] 2026-02-02 09:14:34,523 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,523 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,523 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,525 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,525 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,525 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,525 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,527 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,527 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-02 09:15:36] 2026-02-02 09:14:34,527 | INFO     | job 6978419496 has completed (purged errors)
[2026-02-02 09:15:36] 2026-02-02 09:14:34,528 | INFO     | overall cleanup function is called
[2026-02-02 09:15:36] 2026-02-02 09:14:35,545 | INFO     | --- collectZombieJob: --- 10, [2349061]
[2026-02-02 09:15:36] 2026-02-02 09:14:35,545 | INFO     | zombie collector waiting for pid 2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:35,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-02 09:15:36] 2026-02-02 09:14:35,546 | INFO     | collected zombie processes
[2026-02-02 09:15:36] 2026-02-02 09:14:35,546 | INFO     | will attempt to kill all subprocesses of pid=2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:36,030 | WARNING  | process 2349061 can no longer be monitored (due to stat problems) - aborting
[2026-02-02 09:15:36] 2026-02-02 09:14:37,265 | INFO     | using path: /opt/boinc/instance_homes/boinc_31418/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-02 09:15:36] 2026-02-02 09:14:37,456 | INFO     | process IDs to be killed: [2349061] (in reverse order)
[2026-02-02 09:15:36] 2026-02-02 09:14:38,031 | WARNING  | found no corresponding commands to process id(s)
[2026-02-02 09:15:36] 2026-02-02 09:14:38,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-02 09:15:36] 2026-02-02 09:14:38,064 | INFO     | did not find any defunct processes belonging to 2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:38,101 | INFO     | did not find any defunct processes belonging to 2349061
[2026-02-02 09:15:36] 2026-02-02 09:14:38,102 | INFO     | ready for new job
[2026-02-02 09:15:36] 2026-02-02 09:14:38,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-02 09:15:36] 2026-02-02 09:14:38,106 | INFO     | **************************************
[2026-02-02 09:15:36] 2026-02-02 09:14:38,106 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-02 09:15:36] 2026-02-02 09:14:38,107 | INFO     | **************************************
[2026-02-02 09:15:36] 2026-02-02 09:14:38,107 | INFO     | 
[2026-02-02 09:15:36] 2026-02-02 09:14:38,121 | INFO     | architecture information:
[2026-02-02 09:15:36] 2026-02-02 09:14:38,123 | INFO     | executing command: cat /etc/os-release
[2026-02-02 09:15:36] 2026-02-02 09:14:38,168 | INFO     | cat /etc/os-release:
[2026-02-02 09:15:36] NAME="CentOS Linux"
[2026-02-02 09:15:36] VERSION="7 (Core)"
[2026-02-02 09:15:36] ID="centos"
[2026-02-02 09:15:36] ID_LIKE="rhel fedora"
[2026-02-02 09:15:36] VERSION_ID="7"
[2026-02-02 09:15:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-02 09:15:36] ANSI_COLOR="0;31"
[2026-02-02 09:15:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-02 09:15:36] HOME_URL="https://www.centos.org/"
[2026-02-02 09:15:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-02 09:15:36] 
[2026-02-02 09:15:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-02 09:15:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-02 09:15:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-02 09:15:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-02 09:15:36] 
[2026-02-02 09:15:36] 2026-02-02 09:14:38,168 | INFO     | **************************************
[2026-02-02 09:15:36] 2026-02-02 09:14:38,517 | INFO     | number of running child processes to parent process 2349061: 1
[2026-02-02 09:15:36] 2026-02-02 09:14:38,518 | INFO     | maximum number of monitored processes: 6
[2026-02-02 09:15:36] 2026-02-02 09:14:38,518 | INFO     | aborting job monitoring since job object (job id=6978419496) has expired
[2026-02-02 09:15:36] 2026-02-02 09:14:38,671 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31418/slots/0
[2026-02-02 09:15:36] 2026-02-02 09:14:38,717 | INFO     | sufficient remaining disk space (212345028608 B)
[2026-02-02 09:15:36] 2026-02-02 09:14:38,717 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-02 09:15:36] 2026-02-02 09:14:38,717 | INFO     | current server update state: UPDATING_FINAL
[2026-02-02 09:15:36] 2026-02-02 09:14:38,718 | INFO     | update_server=False
[2026-02-02 09:15:36] 2026-02-02 09:14:38,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-02 09:15:36] 2026-02-02 09:14:38,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-02 09:15:36] 2026-02-02 09:14:38,719 | INFO     | will abort loop
[2026-02-02 09:15:36] 2026-02-02 09:14:38,844 | INFO     | all payload control threads have been joined
[2026-02-02 09:15:36] 2026-02-02 09:14:39,020 | INFO     | all data control threads have been joined
[2026-02-02 09:15:36] 2026-02-02 09:14:39,218 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-02 09:15:36] 2026-02-02 09:14:39,322 | INFO     | all job control threads have been joined
[2026-02-02 09:15:36] 2026-02-02 09:14:39,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-02 09:15:36] 2026-02-02 09:14:39,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-02 09:15:36] 2026-02-02 09:14:39,724 | INFO     | [job] job monitor thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:39,725 | INFO     | [job] retrieve thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:39,823 | INFO     | [job] create_data_payload thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:39,849 | INFO     | [payload] control thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,025 | INFO     | [data] control thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,202 | INFO     | [payload] failed_post thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,217 | INFO     | [data] copytool_in thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,319 | INFO     | [payload] validate_post thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,328 | INFO     | [job] control thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,483 | INFO     | [job] queue monitor thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,615 | INFO     | [payload] validate_pre thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,810 | INFO     | [job] validate thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:40,952 | INFO     | [payload] execute_payloads thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:41,444 | INFO     | [data] copytool_out thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:43,224 | INFO     | [data] queue_monitor thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:14:49,004 | INFO     | job.realtimelogging is not enabled
[2026-02-02 09:15:36] 2026-02-02 09:14:50,009 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-02 09:15:36] 2026-02-02 09:15:08,057 | INFO     | PID=2344091 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-02 09:15:36] 2026-02-02 09:15:08,057 | INFO     | .. there are 20 such processes running
[2026-02-02 09:15:36] 2026-02-02 09:15:08,058 | INFO     | found 0 job(s) in 20 queues
[2026-02-02 09:15:36] 2026-02-02 09:15:08,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-02 09:15:36] 2026-02-02 09:15:08,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-02 09:15:36] 2026-02-02 09:15:30,482 | INFO     | [monitor] cgroup control has ended
[2026-02-02 09:15:36] 2026-02-02 09:15:30,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967611955008)>', '<ExcThread(monitor, started 139966944376576)>']
[2026-02-02 09:15:36] 2026-02-02 09:15:31,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-02 09:15:36] 2026-02-02 09:15:31,179 | INFO     | [monitor] control thread has ended
[2026-02-02 09:15:36] 2026-02-02 09:15:35,865 | INFO     | all workflow threads have been joined
[2026-02-02 09:15:36] 2026-02-02 09:15:35,865 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-02 09:15:36] 2026-02-02 09:15:35,865 | INFO     | traces error code: 0
[2026-02-02 09:15:36] 2026-02-02 09:15:35,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-02 09:15:36] 2026-02-02 09:15:36,297 [wrapper] ==== pilot stdout END ====
[2026-02-02 09:15:36] 2026-02-02 09:15:36,311 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-02 09:15:36] 2026-02-02 09:15:36,321 [wrapper] pilotpid: 2344091
[2026-02-02 09:15:36] 2026-02-02 09:15:36,331 [wrapper] Pilot exit status: 0
[2026-02-02 09:15:36] 2026-02-02 09:15:36,370 [wrapper] pandaids: 6978419496
[2026-02-02 09:15:36] 2026-02-02 09:15:36,541 [wrapper] cleanup supervisor_pilot 2586216 2344092
[2026-02-02 09:15:36] 2026-02-02 09:15:36,550 [wrapper] Test setup, not cleaning
[2026-02-02 09:15:36] 2026-02-02 09:15:36,559 [wrapper] apfmon messages muted
[2026-02-02 09:15:36] 2026-02-02 09:15:36,570 [wrapper] ==== wrapper stdout END ====
[2026-02-02 09:15:36] 2026-02-02 09:15:36,578 [wrapper] ==== wrapper stderr END ====
[2026-02-02 09:15:36]  *** Error codes and diagnostics ***
[2026-02-02 09:15:36]     "exeErrorCode": 0,
[2026-02-02 09:15:36]     "exeErrorDiag": "",
[2026-02-02 09:15:36]     "pilotErrorCode": 0,
[2026-02-02 09:15:36]     "pilotErrorDiag": "",
[2026-02-02 09:15:36]  *** Listing of results directory ***
[2026-02-02 09:15:36] total 665508
[2026-02-02 09:15:36] -rw-r--r-- 1 boinc boinc    584422 Jan 23 09:46 pilot3.tar.gz
[2026-02-02 09:15:36] -rwx------ 1 boinc boinc     36322 Jan 23 09:47 runpilot2-wrapper.sh
[2026-02-02 09:15:36] -rw-r--r-- 1 boinc boinc      5111 Jan 23 09:48 queuedata.json
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc       100 Feb  2 07:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-02 09:15:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  2 07:22 run_atlas
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc       105 Feb  2 07:22 job.xml
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc 495353744 Feb  2 07:22 EVNT.48310824._000027.pool.root.1
[2026-02-02 09:15:36] drwxrwx--x 2 boinc boinc      4096 Feb  2 07:22 shared
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc    597753 Feb  2 07:22 input.tar.gz
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc     15845 Feb  2 07:22 start_atlas.sh
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc      7051 Feb  2 07:22 init_data.xml
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc         0 Feb  2 07:22 boinc_setup_complete
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc         0 Feb  2 07:22 boinc_lockfile
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc      2525 Feb  2 07:22 pandaJob.out
[2026-02-02 09:15:36] -rw------- 1 boinc boinc   1009823 Feb  2 07:23 agis_schedconf.cvmfs.json
[2026-02-02 09:15:36] -rw------- 1 boinc boinc   1511668 Feb  2 07:23 agis_ddmendpoints.agis.ALL.json
[2026-02-02 09:15:36] -rw------- 1 boinc boinc       420 Feb  2 07:23 workernode_map.json
[2026-02-02 09:15:36] drwx------ 5 boinc boinc      4096 Feb  2 07:23 pilot3
[2026-02-02 09:15:36] -rw------- 1 boinc boinc 179414123 Feb  2 09:13 HITS.48310826._001398.pool.root.1
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc       531 Feb  2 09:13 boinc_task_state.xml
[2026-02-02 09:15:36] -rw------- 1 boinc boinc      1025 Feb  2 09:14 memory_monitor_summary.json
[2026-02-02 09:15:36] -rw------- 1 boinc boinc    454291 Feb  2 09:14 log.48310826._001398.job.log.tgz.1
[2026-02-02 09:15:36] -rw------- 1 boinc boinc      6275 Feb  2 09:14 heartbeat.json
[2026-02-02 09:15:36] -rw------- 1 boinc boinc        95 Feb  2 09:15 pilot_heartbeat.json
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc      8192 Feb  2 09:15 boinc_mmap_file
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc        27 Feb  2 09:15 wrapper_checkpoint.txt
[2026-02-02 09:15:36] -rw------- 1 boinc boinc      5207 Feb  2 09:15 pilotlog.txt
[2026-02-02 09:15:36] -rw------- 1 boinc boinc    933057 Feb  2 09:15 log.48310826._001398.job.log.1
[2026-02-02 09:15:36] -rw------- 1 boinc boinc       357 Feb  2 09:15 output.list
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc       620 Feb  2 09:15 runtime_log
[2026-02-02 09:15:36] -rw------- 1 boinc boinc   1402880 Feb  2 09:15 result.tar.gz
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc      9166 Feb  2 09:15 runtime_log.err
[2026-02-02 09:15:36] -rw------- 1 boinc boinc       652 Feb  2 09:15 jOIMDm2vS38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5Q2KDmBLz4Rn.diag
[2026-02-02 09:15:36] -rw-rw-r-- 1 boinc boinc     20897 Feb  2 09:15 stderr.txt
[2026-02-02 09:15:36] HITS file was successfully produced:
[2026-02-02 09:15:36] -rw------- 1 boinc boinc 179414123 Feb  2 09:13 shared/HITS.pool.root.1
[2026-02-02 09:15:36]  *** Contents of shared directory: ***
[2026-02-02 09:15:36] total 660936
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc 495353744 Feb  2 07:22 ATLAS.root_0
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc    597753 Feb  2 07:22 input.tar.gz
[2026-02-02 09:15:36] -rw-r--r-- 2 boinc boinc     15845 Feb  2 07:22 start_atlas.sh
[2026-02-02 09:15:36] -rw------- 1 boinc boinc 179414123 Feb  2 09:13 HITS.pool.root.1
[2026-02-02 09:15:36] -rw------- 1 boinc boinc   1402880 Feb  2 09:15 result.tar.gz
09:15:38 (2339896): run_atlas exited; CPU time 41739.461671
09:15:38 (2339896): called boinc_finish(0)

</stderr_txt>
]]>

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