Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:47:54 (889567): wrapper (7.7.26015): starting
17:47:54 (889567): wrapper: running run_atlas (--nthreads 4)
[2026-01-31 17:47:54] Arguments: --nthreads 4
[2026-01-31 17:47:54] Threads: 4
[2026-01-31 17:47:54] Checking for CVMFS
[2026-01-31 17:47:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 17:47:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 17:47:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 17:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 17:47:58] 2.13.3.0 3422753 4823 51832 155731 3 188 5526546 6144001 6454 130560 0 11724453 99.997 155457 898 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2026-01-31 17:47:58] CVMFS is ok
[2026-01-31 17:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 17:47:58] Checking for apptainer binary...
[2026-01-31 17:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 17:47:58] Running /usr/bin/apptainer --version
[2026-01-31 17:47:58] apptainer version 1.4.5
[2026-01-31 17:47:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 17:47:58] Starfish-Cruncher
[2026-01-31 17:47:58] apptainer works
[2026-01-31 17:47:58] Set ATHENA_PROC_NUMBER=4
[2026-01-31 17:47:58] Set ATHENA_CORE_NUMBER=4
[2026-01-31 17:47:58] Starting ATLAS job with PandaID=6978169466
[2026-01-31 17:47:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 19:45:29]  *** The last 200 lines of the pilot log: ***
[2026-01-31 19:45:29] 2026-02-01 01:44:29,500 | INFO     | log transfer has been attempted: DONE
[2026-01-31 19:45:29] 2026-02-01 01:44:29,500 | INFO     | job 6978169466 has finished - writing final server update
[2026-01-31 19:45:29] 2026-02-01 01:44:29,500 | INFO     | total number of processed events: 400 (read)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,506 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6978169466/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,506 | INFO     | extracted standard info from prmon json
[2026-01-31 19:45:29] 2026-02-01 01:44:29,506 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 19:45:29] 2026-02-01 01:44:29,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 19:45:29] 2026-02-01 01:44:29,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 19:45:29] 2026-02-01 01:44:29,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 19:45:29] 2026-02-01 01:44:29,509 | INFO     | fitting pss+swap vs Time
[2026-01-31 19:45:29] 2026-02-01 01:44:29,509 | INFO     | sum of square deviations: 459366752.5
[2026-01-31 19:45:29] 2026-02-01 01:44:29,509 | INFO     | sum of deviations: 8725903173.000002
[2026-01-31 19:45:29] 2026-02-01 01:44:29,509 | INFO     | mean x: 1769906758.5
[2026-01-31 19:45:29] 2026-02-01 01:44:29,509 | INFO     | mean y: 2299733.8596491227
[2026-01-31 19:45:29] 2026-02-01 01:44:29,510 | INFO     | intersect: -33617971902.8198
[2026-01-31 19:45:29] 2026-02-01 01:44:29,510 | INFO     | chi2: 1.3910627069860801
[2026-01-31 19:45:29] 2026-02-01 01:44:29,510 | INFO     | sum of square deviations: 401533110.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,510 | INFO     | sum of deviations: 8364543137.999998
[2026-01-31 19:45:29] 2026-02-01 01:44:29,510 | INFO     | mean x: 1769906606.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | mean y: 2298780.3944954127
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | intersect: -36867537821.917496
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | chi2: 1.3936930405829597
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | current chi2=1.3936930405829597 (change=-0.18908806796916788 %)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | right removable region: 108
[2026-01-31 19:45:29] 2026-02-01 01:44:29,511 | INFO     | sum of square deviations: 401533110.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | sum of deviations: -4927770808.000001
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | mean x: 1769906911.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | mean y: 2334811.1559633026
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | intersect: 21723322176.06656
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | chi2: 0.012323919433840595
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | current chi2=0.012323919433840595 (change=99.11406442197404 %)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,512 | INFO     | sum of square deviations: 348769330.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | sum of deviations: -3710768225.9999995
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | mean x: 1769907063.5
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | mean y: 2331283.596153846
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | intersect: 18833444943.185326
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | chi2: 0.011013169065537684
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | current chi2=0.011013169065537684 (change=10.635823897904462 %)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | left removable region: 20
[2026-01-31 19:45:29] 2026-02-01 01:44:29,513 | INFO     | sum of square deviations: 211285822.0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | sum of deviations: -1468228123.4999998
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | mean x: 1769907185.5
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | mean y: 2324207.4886363638
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | intersect: 12301433921.229063
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | chi2: 0.006741713234443075
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | current memory leak: -6.95 B/s (using 88 data points, chi2=0.01)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,514 | INFO     | could have reported an average CPU frequency of 3577 MHz (7 samples)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | ..............................
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . Timing measurements:
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . get job = 0 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . initial setup = 6 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . payload setup = 4 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . stage-in = 0 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . payload execution = 6957 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . stage-out = 0 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | . log creation = 0 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,515 | INFO     | ..............................
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | 
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | job summary report
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | --------------------------------------------------
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | PanDA job id: 6978169466
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | task id: 48310670
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | errors: (none)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | pilot state: finished 
[2026-01-31 19:45:29] 2026-02-01 01:44:29,586 | INFO     | transexitcode: 0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | exeerrorcode: 0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | exeerrordiag: 
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | exitcode: 0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | exitmsg: OK
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | cpuconsumptiontime: 26583 s
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | nevents: 400
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | neventsw: 0
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | pid: 898575
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | pgrp: 898575
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | corecount: 4
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | event service: False
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | sizes: {0: 2277792, 1: 2278309, 11: 2278309, 6965: 2305613, 6966: 2314818}
[2026-01-31 19:45:29] 2026-02-01 01:44:29,587 | INFO     | --------------------------------------------------
[2026-01-31 19:45:29] 2026-02-01 01:44:29,588 | INFO     | 
[2026-01-31 19:45:29] 2026-02-01 01:44:29,588 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 19:45:29] 2026-02-01 01:44:29,606 | INFO     | job 6978169466 has completed (purged errors)
[2026-01-31 19:45:29] 2026-02-01 01:44:29,607 | INFO     | overall cleanup function is called
[2026-01-31 19:45:29] 2026-02-01 01:44:29,780 | INFO     | PID=893854 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 19:45:29] 2026-02-01 01:44:29,780 | INFO     | .. there are 8 such processes running
[2026-01-31 19:45:29] 2026-02-01 01:44:30,615 | INFO     | --- collectZombieJob: --- 10, [898575]
[2026-01-31 19:45:29] 2026-02-01 01:44:30,615 | INFO     | zombie collector waiting for pid 898575
[2026-01-31 19:45:29] 2026-02-01 01:44:30,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 19:45:29] 2026-02-01 01:44:30,615 | INFO     | collected zombie processes
[2026-01-31 19:45:29] 2026-02-01 01:44:30,615 | INFO     | will attempt to kill all subprocesses of pid=898575
[2026-01-31 19:45:29] 2026-02-01 01:44:30,776 | INFO     | process IDs to be killed: [898575] (in reverse order)
[2026-01-31 19:45:29] 2026-02-01 01:44:30,835 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 19:45:29] 2026-02-01 01:44:30,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 19:45:29] 2026-02-01 01:44:30,840 | INFO     | did not find any defunct processes belonging to 898575
[2026-01-31 19:45:29] 2026-02-01 01:44:30,844 | INFO     | did not find any defunct processes belonging to 898575
[2026-01-31 19:45:29] 2026-02-01 01:44:30,844 | INFO     | ready for new job
[2026-01-31 19:45:29] 2026-02-01 01:44:30,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 19:45:29] 2026-02-01 01:44:30,845 | INFO     | **************************************
[2026-01-31 19:45:29] 2026-02-01 01:44:30,846 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 19:45:29] 2026-02-01 01:44:30,846 | INFO     | **************************************
[2026-01-31 19:45:29] 2026-02-01 01:44:30,846 | INFO     | 
[2026-01-31 19:45:29] 2026-02-01 01:44:30,847 | INFO     | architecture information:
[2026-01-31 19:45:29] 2026-02-01 01:44:30,847 | INFO     | executing command: cat /etc/os-release
[2026-01-31 19:45:29] 2026-02-01 01:44:30,859 | INFO     | cat /etc/os-release:
[2026-01-31 19:45:29] NAME="CentOS Linux"
[2026-01-31 19:45:29] VERSION="7 (Core)"
[2026-01-31 19:45:29] ID="centos"
[2026-01-31 19:45:29] ID_LIKE="rhel fedora"
[2026-01-31 19:45:29] VERSION_ID="7"
[2026-01-31 19:45:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 19:45:29] ANSI_COLOR="0;31"
[2026-01-31 19:45:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 19:45:29] HOME_URL="https://www.centos.org/"
[2026-01-31 19:45:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 19:45:29] 
[2026-01-31 19:45:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 19:45:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 19:45:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 19:45:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 19:45:29] 
[2026-01-31 19:45:29] 2026-02-01 01:44:30,859 | INFO     | **************************************
[2026-01-31 19:45:29] 2026-02-01 01:44:31,362 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-01-31 19:45:29] 2026-02-01 01:44:31,375 | INFO     | sufficient remaining disk space (1795863609344 B)
[2026-01-31 19:45:29] 2026-02-01 01:44:31,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 19:45:29] 2026-02-01 01:44:31,376 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 19:45:29] 2026-02-01 01:44:31,376 | INFO     | update_server=False
[2026-01-31 19:45:29] 2026-02-01 01:44:31,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 19:45:29] 2026-02-01 01:44:31,376 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 19:45:29] 2026-02-01 01:44:31,376 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 19:45:29] 2026-02-01 01:44:31,475 | INFO     | all data control threads have been joined
[2026-01-31 19:45:29] 2026-02-01 01:44:31,625 | INFO     | all payload control threads have been joined
[2026-01-31 19:45:29] 2026-02-01 01:44:31,746 | INFO     | all job control threads have been joined
[2026-01-31 19:45:29] 2026-02-01 01:44:32,381 | INFO     | [job] retrieve thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,381 | INFO     | [job] queue monitor thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,432 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 19:45:29] 2026-02-01 01:44:32,480 | INFO     | [data] control thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,509 | INFO     | [data] copytool_in thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,592 | INFO     | job.realtimelogging is not enabled
[2026-01-31 19:45:29] 2026-02-01 01:44:32,628 | INFO     | [payload] control thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,751 | INFO     | [job] control thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:32,805 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,067 | INFO     | [payload] validate_post thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,472 | INFO     | [job] validate thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,617 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,754 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:33,899 | INFO     | [payload] failed_post thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:34,437 | INFO     | [data] copytool_out thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:35,214 | WARNING  | process 898575 can no longer be monitored (due to stat problems) - aborting
[2026-01-31 19:45:29] 2026-02-01 01:44:35,329 | INFO     | using path: /var/lib/boinc-client/slots/6/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 19:45:29] 2026-02-01 01:44:35,382 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:44:35,485 | INFO     | number of running child processes to parent process 898575: 1
[2026-01-31 19:45:29] 2026-02-01 01:44:35,485 | INFO     | maximum number of monitored processes: 6
[2026-01-31 19:45:29] 2026-02-01 01:44:35,486 | INFO     | aborting job monitoring since job object (job id=6978169466) has expired
[2026-01-31 19:45:29] 2026-02-01 01:44:35,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 19:45:29] 2026-02-01 01:44:35,486 | INFO     | will abort loop
[2026-01-31 19:45:29] 2026-02-01 01:44:36,491 | INFO     | [job] job monitor thread has finished
[2026-01-31 19:45:29] 2026-02-01 01:45:02,017 | INFO     | PID=893854 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 19:45:29] 2026-02-01 01:45:02,017 | INFO     | .. there are 8 such processes running
[2026-01-31 19:45:29] 2026-02-01 01:45:02,018 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 19:45:29] 2026-02-01 01:45:02,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 19:45:29] 2026-02-01 01:45:02,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 19:45:29] 2026-02-01 01:45:23,765 | INFO     | [monitor] cgroup control has ended
[2026-01-31 19:45:29] 2026-02-01 01:45:24,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132123699062592)>', '<ExcThread(monitor, started 132122958345984)>']
[2026-01-31 19:45:29] 2026-02-01 01:45:25,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 19:45:29] 2026-02-01 01:45:25,128 | INFO     | [monitor] control thread has ended
[2026-01-31 19:45:29] 2026-02-01 01:45:29,766 | INFO     | all workflow threads have been joined
[2026-01-31 19:45:29] 2026-02-01 01:45:29,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 19:45:29] 2026-02-01 01:45:29,766 | INFO     | traces error code: 0
[2026-01-31 19:45:29] 2026-02-01 01:45:29,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 19:45:29] 2026-02-01 01:45:29,844 [wrapper] ==== pilot stdout END ====
[2026-01-31 19:45:29] 2026-02-01 01:45:29,846 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 19:45:29] 2026-02-01 01:45:29,848 [wrapper] pilotpid: 893854
[2026-01-31 19:45:29] 2026-02-01 01:45:29,850 [wrapper] Pilot exit status: 0
[2026-01-31 19:45:29] 2026-02-01 01:45:29,856 [wrapper] pandaids: 6978169466
[2026-01-31 19:45:29] 2026-02-01 01:45:29,896 [wrapper] cleanup supervisor_pilot  988240 893855
[2026-01-31 19:45:29] 2026-02-01 01:45:29,898 [wrapper] Test setup, not cleaning
[2026-01-31 19:45:29] 2026-02-01 01:45:29,900 [wrapper] apfmon messages muted
[2026-01-31 19:45:29] 2026-02-01 01:45:29,902 [wrapper] ==== wrapper stdout END ====
[2026-01-31 19:45:29] 2026-02-01 01:45:29,904 [wrapper] ==== wrapper stderr END ====
[2026-01-31 19:45:29]  *** Error codes and diagnostics ***
[2026-01-31 19:45:29]     "exeErrorCode": 0,
[2026-01-31 19:45:29]     "exeErrorDiag": "",
[2026-01-31 19:45:29]     "pilotErrorCode": 0,
[2026-01-31 19:45:29]     "pilotErrorDiag": "",
[2026-01-31 19:45:29]  *** Listing of results directory ***
[2026-01-31 19:45:29] total 673448
[2026-01-31 19:45:29] -rwx------ 1 boinc boinc     36322 Jan 22 23:19 runpilot2-wrapper.sh
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc      5111 Jan 22 23:20 queuedata.json
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc    584422 Jan 22 23:20 pilot3.tar.gz
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc       100 Jan 31 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 19:45:29] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 17:47 run_atlas
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc       105 Jan 31 17:47 job.xml
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc      9664 Jan 31 17:47 init_data.xml
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc 504586168 Jan 31 17:47 EVNT.48310665._000093.pool.root.1
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc     15845 Jan 31 17:47 start_atlas.sh
[2026-01-31 19:45:29] drwxrwx--x 2 boinc boinc      4096 Jan 31 17:47 shared
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc    597754 Jan 31 17:47 input.tar.gz
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc         0 Jan 31 17:47 boinc_lockfile
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc      2524 Jan 31 17:47 pandaJob.out
[2026-01-31 19:45:29] -rw------- 1 boinc boinc   1010528 Jan 31 17:48 agis_schedconf.cvmfs.json
[2026-01-31 19:45:29] -rw------- 1 boinc boinc   1511668 Jan 31 17:48 agis_ddmendpoints.agis.ALL.json
[2026-01-31 19:45:29] -rw------- 1 boinc boinc       433 Jan 31 17:48 workernode_map.json
[2026-01-31 19:45:29] drwx------ 5 boinc boinc      4096 Jan 31 17:48 pilot3
[2026-01-31 19:45:29] -rw------- 1 boinc boinc 178428046 Jan 31 19:44 HITS.48310670._004626.pool.root.1
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc       531 Jan 31 19:44 boinc_task_state.xml
[2026-01-31 19:45:29] -rw------- 1 boinc boinc      1036 Jan 31 19:44 memory_monitor_summary.json
[2026-01-31 19:45:29] -rw------- 1 boinc boinc    313371 Jan 31 19:44 log.48310670._004626.job.log.tgz.1
[2026-01-31 19:45:29] -rw------- 1 boinc boinc      6311 Jan 31 19:44 heartbeat.json
[2026-01-31 19:45:29] -rw------- 1 boinc boinc        95 Jan 31 19:45 pilot_heartbeat.json
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc        27 Jan 31 19:45 wrapper_checkpoint.txt
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc      8192 Jan 31 19:45 boinc_mmap_file
[2026-01-31 19:45:29] -rw------- 1 boinc boinc      5425 Jan 31 19:45 pilotlog.txt
[2026-01-31 19:45:29] -rw------- 1 boinc boinc   1012883 Jan 31 19:45 log.48310670._004626.job.log.1
[2026-01-31 19:45:29] -rw------- 1 boinc boinc       357 Jan 31 19:45 output.list
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc       620 Jan 31 19:45 runtime_log
[2026-01-31 19:45:29] -rw------- 1 boinc boinc   1341440 Jan 31 19:45 result.tar.gz
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc      8932 Jan 31 19:45 runtime_log.err
[2026-01-31 19:45:29] -rw------- 1 boinc boinc       652 Jan 31 19:45 GGrLDmskO38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4y1KDmxxnz2n.diag
[2026-01-31 19:45:29] -rw-r--r-- 1 boinc boinc     21016 Jan 31 19:45 stderr.txt
[2026-01-31 19:45:29] HITS file was successfully produced:
[2026-01-31 19:45:29] -rw------- 1 boinc boinc 178428046 Jan 31 19:44 shared/HITS.pool.root.1
[2026-01-31 19:45:29]  *** Contents of shared directory: ***
[2026-01-31 19:45:29] total 668928
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc 504586168 Jan 31 17:47 ATLAS.root_0
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc     15845 Jan 31 17:47 start_atlas.sh
[2026-01-31 19:45:29] -rw-r--r-- 2 boinc boinc    597754 Jan 31 17:47 input.tar.gz
[2026-01-31 19:45:29] -rw------- 1 boinc boinc 178428046 Jan 31 19:44 HITS.pool.root.1
[2026-01-31 19:45:29] -rw------- 1 boinc boinc   1341440 Jan 31 19:45 result.tar.gz
19:45:31 (889567): run_atlas exited; CPU time 26688.012036
19:45:31 (889567): called boinc_finish(0)

</stderr_txt>
]]>

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