Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:20 (675318): wrapper (7.7.26015): starting
05:43:20 (675318): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 05:43:20] Arguments: --nthreads 3
[2026-02-01 05:43:20] Threads: 3
[2026-02-01 05:43:20] Checking for CVMFS
[2026-02-01 05:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 05:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 05:43:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 05:43:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 05:43:21] 2.9.2.0 4004477 5250 83024 155738 3 50 19118446 36864000 0 130560 0 2400278 99.987 160391 8739 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 05:43:21] CVMFS is ok
[2026-02-01 05:43:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 05:43:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 05:43:21] Further information can be found at the LHC@home message board.
[2026-02-01 05:43:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 05:43:21] Checking for apptainer binary...
[2026-02-01 05:43:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 05:43:21] Running /usr/bin/apptainer --version
[2026-02-01 05:43:21] apptainer version 1.4.1-1.1
[2026-02-01 05:43:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 05:43:21] cosA121b
[2026-02-01 05:43:21] apptainer works
[2026-02-01 05:43:21] Set ATHENA_PROC_NUMBER=3
[2026-02-01 05:43:21] Set ATHENA_CORE_NUMBER=3
[2026-02-01 05:43:21] Starting ATLAS job with PandaID=6994437974
[2026-02-01 05:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 07:08:42]  *** The last 200 lines of the pilot log: ***
[2026-02-01 07:08:42]  direct_access_wan=False
[2026-02-01 07:08:42]  domain=
[2026-02-01 07:08:42]  filesize=291366
[2026-02-01 07:08:42]  filetype=log
[2026-02-01 07:08:42]  guid=fc3ebe1d-51e1-4c46-bedc-a285b14baec0
[2026-02-01 07:08:42]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-01 07:08:42]  is_altstaged=None
[2026-02-01 07:08:42]  is_tar=False
[2026-02-01 07:08:42]  lfn=log.48317931._008421.job.log.tgz.1
[2026-02-01 07:08:42]  mtime=0
[2026-02-01 07:08:42]  protocol_id=None
[2026-02-01 07:08:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-01 07:08:42]  replicas=None
[2026-02-01 07:08:42]  scope=mc23_13p6TeV
[2026-02-01 07:08:42]  status=None
[2026-02-01 07:08:42]  status_code=0
[2026-02-01 07:08:42]  storage_token=
[2026-02-01 07:08:42]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6994437974/log.48317931._008421.job.log.tgz.1
[2026-02-01 07:08:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/fe/log.48317931._008421.job.log.tgz.1
[2026-02-01 07:08:42]  workdir=None
[2026-02-01 07:08:42] ]
[2026-02-01 07:08:42] 2026-02-01 06:08:02,259 | INFO     | transferring file log.48317931._008421.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6994437974/log.48317931._008421.job.log.tgz.1 to /local/data/boinc/
[2026-02-01 07:08:42] 2026-02-01 06:08:02,259 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6994437974/log.48317931._008421.job.log.tgz.1 /local/data/boinc/slots/0/log.48317931._0084
[2026-02-01 07:08:42] 2026-02-01 06:08:02,271 | INFO     | adding to output.list: log.48317931._008421.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/fe/log.48317931._008421.job.log.tg
[2026-02-01 07:08:42] 2026-02-01 06:08:02,271 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 07:08:42] 2026-02-01 06:08:02,271 | INFO     | summary of transferred files:
[2026-02-01 07:08:42] 2026-02-01 06:08:02,271 | INFO     |  -- lfn=log.48317931._008421.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 07:08:42] 2026-02-01 06:08:02,271 | INFO     | stage-out finished correctly
[2026-02-01 07:08:42] 2026-02-01 06:08:02,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 07:08:42] 2026-02-01 06:08:03,009 | INFO     | monitor loop #391: job 0:6994437974 is in state 'finished'
[2026-02-01 07:08:42] 2026-02-01 06:08:03,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,183 | INFO     | job 6994437974 has state=finished
[2026-02-01 07:08:42] 2026-02-01 06:08:03,183 | INFO     | preparing for final server update for job 6994437974 in state='finished'
[2026-02-01 07:08:42] 2026-02-01 06:08:03,183 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6994437974/jobReport.json
[2026-02-01 07:08:42] 2026-02-01 06:08:03,184 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-01 07:08:42] 2026-02-01 06:08:03,184 | INFO     | this job has now completed (state=finished)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,184 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,184 | INFO     | log transfer has been attempted: DONE
[2026-02-01 07:08:42] 2026-02-01 06:08:03,184 | INFO     | job 6994437974 has finished - writing final server update
[2026-02-01 07:08:42] 2026-02-01 06:08:03,185 | INFO     | total number of processed events: 400 (read)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,185 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994437974/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | INFO     | extracted standard info from prmon json
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | INFO     | fitting pss+swap vs Time
[2026-02-01 07:08:42] 2026-02-01 06:08:03,186 | INFO     | sum of square deviations: 136095575.0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | sum of deviations: -12692978576.000002
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | mean x: 1769923619.5
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | mean y: 2446871.763157895
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | intersect: 165074695425.54514
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | chi2: 0.1672166581851776
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | current memory leak: -93.27 B/s (using 76 data points, chi2=0.17)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | could have reported an average CPU frequency of 3584 MHz (6 samples)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | ..............................
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . Timing measurements:
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . get job = 0 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . initial setup = 3 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . payload setup = 2 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . stage-in = 0 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . payload execution = 5053 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . stage-out = 0 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | . log creation = 0 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,187 | INFO     | ..............................
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | 
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | job summary report
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | --------------------------------------------------
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | PanDA job id: 6994437974
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | task id: 48317931
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | errors: (none)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | pilot state: finished 
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | transexitcode: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | exeerrorcode: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | exeerrordiag: 
[2026-02-01 07:08:42] 2026-02-01 06:08:03,298 | INFO     | exitcode: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | exitmsg: OK
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | cpuconsumptiontime: 14514 s
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | nevents: 400
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | neventsw: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | pid: 683795
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | pgrp: 683795
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | corecount: 3
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | event service: False
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | sizes: {0: 2278214, 11: 2278214, 5060: 2304676, 5061: 2313736, 5062: 2313874}
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | --------------------------------------------------
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | 
[2026-02-01 07:08:42] 2026-02-01 06:08:03,299 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-01 07:08:42] 2026-02-01 06:08:03,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | job 6994437974 has completed (purged errors)
[2026-02-01 07:08:42] 2026-02-01 06:08:03,312 | INFO     | overall cleanup function is called
[2026-02-01 07:08:42] 2026-02-01 06:08:04,319 | INFO     | --- collectZombieJob: --- 10, [683795]
[2026-02-01 07:08:42] 2026-02-01 06:08:04,319 | INFO     | zombie collector waiting for pid 683795
[2026-02-01 07:08:42] 2026-02-01 06:08:04,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 07:08:42] 2026-02-01 06:08:04,319 | INFO     | collected zombie processes
[2026-02-01 07:08:42] 2026-02-01 06:08:04,319 | INFO     | will attempt to kill all subprocesses of pid=683795
[2026-02-01 07:08:42] 2026-02-01 06:08:04,363 | INFO     | process IDs to be killed: [683795] (in reverse order)
[2026-02-01 07:08:42] 2026-02-01 06:08:04,389 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 07:08:42] 2026-02-01 06:08:04,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 07:08:42] 2026-02-01 06:08:04,390 | INFO     | did not find any defunct processes belonging to 683795
[2026-02-01 07:08:42] 2026-02-01 06:08:04,392 | INFO     | did not find any defunct processes belonging to 683795
[2026-02-01 07:08:42] 2026-02-01 06:08:04,392 | INFO     | ready for new job
[2026-02-01 07:08:42] 2026-02-01 06:08:04,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | **************************************
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | **************************************
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | 
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | architecture information:
[2026-02-01 07:08:42] 2026-02-01 06:08:04,393 | INFO     | executing command: cat /etc/os-release
[2026-02-01 07:08:42] 2026-02-01 06:08:04,402 | INFO     | cat /etc/os-release:
[2026-02-01 07:08:42] NAME="CentOS Linux"
[2026-02-01 07:08:42] VERSION="7 (Core)"
[2026-02-01 07:08:42] ID="centos"
[2026-02-01 07:08:42] ID_LIKE="rhel fedora"
[2026-02-01 07:08:42] VERSION_ID="7"
[2026-02-01 07:08:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 07:08:42] ANSI_COLOR="0;31"
[2026-02-01 07:08:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 07:08:42] HOME_URL="https://www.centos.org/"
[2026-02-01 07:08:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 07:08:42] 
[2026-02-01 07:08:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 07:08:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 07:08:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 07:08:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 07:08:42] 
[2026-02-01 07:08:42] 2026-02-01 06:08:04,402 | INFO     | **************************************
[2026-02-01 07:08:42] 2026-02-01 06:08:04,905 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | INFO     | sufficient remaining disk space (336289857536 B)
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | INFO     | update_server=False
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 07:08:42] 2026-02-01 06:08:04,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 07:08:42] 2026-02-01 06:08:04,915 | INFO     | aborting loop
[2026-02-01 07:08:42] 2026-02-01 06:08:04,915 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 07:08:42] 2026-02-01 06:08:04,915 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 07:08:42] 2026-02-01 06:08:05,305 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 07:08:42] 2026-02-01 06:08:05,322 | INFO     | all payload control threads have been joined
[2026-02-01 07:08:42] 2026-02-01 06:08:05,344 | INFO     | all data control threads have been joined
[2026-02-01 07:08:42] 2026-02-01 06:08:05,468 | INFO     | all job control threads have been joined
[2026-02-01 07:08:42] 2026-02-01 06:08:05,917 | INFO     | [job] retrieve thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:05,919 | INFO     | [job] queue monitor thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:05,920 | INFO     | [job] job monitor thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:05,926 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:05,972 | INFO     | [data] copytool_in thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:06,327 | INFO     | [payload] control thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:06,349 | INFO     | [data] control thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:06,373 | INFO     | [payload] failed_post thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:06,473 | INFO     | [job] control thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:06,940 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:07,269 | INFO     | [payload] validate_post thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:07,272 | INFO     | [job] validate thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:07,311 | INFO     | [data] copytool_out thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:07,385 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:08,921 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:15,847 | INFO     | job.realtimelogging is not enabled
[2026-02-01 07:08:42] 2026-02-01 06:08:16,852 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 07:08:42] 2026-02-01 06:08:34,780 | INFO     | PID=679371 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 07:08:42] 2026-02-01 06:08:34,780 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 07:08:42] 2026-02-01 06:08:34,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 07:08:42] 2026-02-01 06:08:34,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 07:08:42] 2026-02-01 06:08:36,195 | INFO     | [monitor] cgroup control has ended
[2026-02-01 07:08:42] 2026-02-01 06:08:37,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140682370144064)>', '<ExcThread(monitor, started 140682014467840)>']
[2026-02-01 07:08:42] 2026-02-01 06:08:37,793 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 07:08:42] 2026-02-01 06:08:37,793 | INFO     | [monitor] control thread has ended
[2026-02-01 07:08:42] 2026-02-01 06:08:42,256 | INFO     | all workflow threads have been joined
[2026-02-01 07:08:42] 2026-02-01 06:08:42,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 07:08:42] 2026-02-01 06:08:42,257 | INFO     | traces error code: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:42,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 07:08:42] 2026-02-01 06:08:42,303 [wrapper] ==== pilot stdout END ====
[2026-02-01 07:08:42] 2026-02-01 06:08:42,306 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 07:08:42] 2026-02-01 06:08:42,308 [wrapper] pilotpid: 679371
[2026-02-01 07:08:42] 2026-02-01 06:08:42,311 [wrapper] Pilot exit status: 0
[2026-02-01 07:08:42] 2026-02-01 06:08:42,317 [wrapper] pandaids: 6994437974
[2026-02-01 07:08:42] 2026-02-01 06:08:42,334 [wrapper] cleanup supervisor_pilot  689413 679372
[2026-02-01 07:08:42] 2026-02-01 06:08:42,337 [wrapper] Test setup, not cleaning
[2026-02-01 07:08:42] 2026-02-01 06:08:42,339 [wrapper] apfmon messages muted
[2026-02-01 07:08:42] 2026-02-01 06:08:42,341 [wrapper] ==== wrapper stdout END ====
[2026-02-01 07:08:42] 2026-02-01 06:08:42,343 [wrapper] ==== wrapper stderr END ====
[2026-02-01 07:08:42]  *** Error codes and diagnostics ***
[2026-02-01 07:08:42]     "exeErrorCode": 0,
[2026-02-01 07:08:42]     "exeErrorDiag": "",
[2026-02-01 07:08:42]     "pilotErrorCode": 0,
[2026-02-01 07:08:42]     "pilotErrorDiag": "",
[2026-02-01 07:08:42]  *** Listing of results directory ***
[2026-02-01 07:08:42] total 671420
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc    584422 Jan 31 08:31 pilot3.tar.gz
[2026-02-01 07:08:42] -rwx------ 1 boinc boinc     36322 Jan 31 08:34 runpilot2-wrapper.sh
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc      5111 Jan 31 08:34 queuedata.json
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc       100 Feb  1 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 07:08:42] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 05:43 run_atlas
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc       105 Feb  1 05:43 job.xml
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc 494388072 Feb  1 05:43 EVNT.48317929._000149.pool.root.1
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc    597765 Feb  1 05:43 input.tar.gz
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc     15845 Feb  1 05:43 start_atlas.sh
[2026-02-01 07:08:42] drwxrwx--x 2 boinc boinc      4096 Feb  1 05:43 shared
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc         0 Feb  1 05:43 boinc_setup_complete
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc      6440 Feb  1 05:43 init_data.xml
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc         0 Feb  1 05:43 boinc_lockfile
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc      2511 Feb  1 05:43 pandaJob.out
[2026-02-01 07:08:42] -rw------- 1 boinc boinc   1010520 Feb  1 05:43 agis_schedconf.cvmfs.json
[2026-02-01 07:08:42] -rw------- 1 boinc boinc   1511668 Feb  1 05:43 agis_ddmendpoints.agis.ALL.json
[2026-02-01 07:08:42] -rw------- 1 boinc boinc       421 Feb  1 05:43 workernode_map.json
[2026-02-01 07:08:42] drwx------ 5 boinc boinc      4096 Feb  1 05:43 pilot3
[2026-02-01 07:08:42] -rw------- 1 boinc boinc 187129689 Feb  1 07:07 HITS.48317931._008421.pool.root.1
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc       530 Feb  1 07:07 boinc_task_state.xml
[2026-02-01 07:08:42] -rw------- 1 boinc boinc        95 Feb  1 07:07 pilot_heartbeat.json
[2026-02-01 07:08:42] -rw------- 1 boinc boinc      1022 Feb  1 07:07 memory_monitor_summary.json
[2026-02-01 07:08:42] -rw------- 1 boinc boinc    291366 Feb  1 07:08 log.48317931._008421.job.log.tgz.1
[2026-02-01 07:08:42] -rw------- 1 boinc boinc      6312 Feb  1 07:08 heartbeat.json
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc        27 Feb  1 07:08 wrapper_checkpoint.txt
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc      8192 Feb  1 07:08 boinc_mmap_file
[2026-02-01 07:08:42] -rw------- 1 boinc boinc      4819 Feb  1 07:08 pilotlog.txt
[2026-02-01 07:08:42] -rw------- 1 boinc boinc    741822 Feb  1 07:08 log.48317931._008421.job.log.1
[2026-02-01 07:08:42] -rw------- 1 boinc boinc       357 Feb  1 07:08 output.list
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc       620 Feb  1 07:08 runtime_log
[2026-02-01 07:08:42] -rw------- 1 boinc boinc   1054720 Feb  1 07:08 result.tar.gz
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc      8906 Feb  1 07:08 runtime_log.err
[2026-02-01 07:08:42] -rw------- 1 boinc boinc       659 Feb  1 07:08 lCzNDmkfK68n9Rq4apOajLDm4fhM0noT9bVooX4SDmaANKDmVHllQm.diag
[2026-02-01 07:08:42] -rw-r--r-- 1 boinc boinc     21015 Feb  1 07:08 stderr.txt
[2026-02-01 07:08:42] HITS file was successfully produced:
[2026-02-01 07:08:42] -rw------- 1 boinc boinc 187129689 Feb  1 07:07 shared/HITS.pool.root.1
[2026-02-01 07:08:42]  *** Contents of shared directory: ***
[2026-02-01 07:08:42] total 667188
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc 494388072 Feb  1 05:43 ATLAS.root_0
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc    597765 Feb  1 05:43 input.tar.gz
[2026-02-01 07:08:42] -rw-r--r-- 2 boinc boinc     15845 Feb  1 05:43 start_atlas.sh
[2026-02-01 07:08:42] -rw------- 1 boinc boinc 187129689 Feb  1 07:07 HITS.pool.root.1
[2026-02-01 07:08:42] -rw------- 1 boinc boinc   1054720 Feb  1 07:08 result.tar.gz
07:08:43 (675318): run_atlas exited; CPU time 14542.219949
07:08:43 (675318): called boinc_finish(0)

</stderr_txt>
]]>

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