Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:17:54 (660894): wrapper (7.7.26015): starting
04:17:54 (660894): wrapper: running run_atlas (--nthreads 3)
[2026-02-01 04:17:54] Arguments: --nthreads 3
[2026-02-01 04:17:54] Threads: 3
[2026-02-01 04:17:54] Checking for CVMFS
[2026-02-01 04:17:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 04:17:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 04:17:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 04:17:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 04:17:55] 2.9.2.0 4004477 5164 83720 155736 1 49 19110701 36864000 0 130560 0 2360310 99.987 157940 8655 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-01 04:17:55] CVMFS is ok
[2026-02-01 04:17:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 04:17:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-01 04:17:55] Further information can be found at the LHC@home message board.
[2026-02-01 04:17:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 04:17:55] Checking for apptainer binary...
[2026-02-01 04:17:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 04:17:55] Running /usr/bin/apptainer --version
[2026-02-01 04:17:55] apptainer version 1.4.1-1.1
[2026-02-01 04:17:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 04:17:55] cosA121b
[2026-02-01 04:17:55] apptainer works
[2026-02-01 04:17:55] Set ATHENA_PROC_NUMBER=3
[2026-02-01 04:17:55] Set ATHENA_CORE_NUMBER=3
[2026-02-01 04:17:55] Starting ATLAS job with PandaID=6994437888
[2026-02-01 04:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 05:43:16]  *** The last 200 lines of the pilot log: ***
[2026-02-01 05:43:16]  storage_token=
[2026-02-01 05:43:16]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6994437888/log.48317931._008335.job.log.tgz.1
[2026-02-01 05:43:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/23/log.48317931._008335.job.log.tgz.1
[2026-02-01 05:43:16]  workdir=None
[2026-02-01 05:43:16] ]
[2026-02-01 05:43:16] 2026-02-01 04:42:06,638 | INFO     | transferring file log.48317931._008335.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6994437888/log.48317931._008335.job.log.tgz.1 to /local/data/boinc/
[2026-02-01 05:43:16] 2026-02-01 04:42:06,638 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6994437888/log.48317931._008335.job.log.tgz.1 /local/data/boinc/slots/0/log.48317931._0083
[2026-02-01 05:43:16] 2026-02-01 04:42:06,650 | INFO     | adding to output.list: log.48317931._008335.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/23/log.48317931._008335.job.log.tg
[2026-02-01 05:43:16] 2026-02-01 04:42:06,650 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-01 05:43:16] 2026-02-01 04:42:06,650 | INFO     | summary of transferred files:
[2026-02-01 05:43:16] 2026-02-01 04:42:06,650 | INFO     |  -- lfn=log.48317931._008335.job.log.tgz.1, status_code=0, status=transferred
[2026-02-01 05:43:16] 2026-02-01 04:42:06,650 | INFO     | stage-out finished correctly
[2026-02-01 05:43:16] 2026-02-01 04:42:06,680 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-01 05:43:16] 2026-02-01 04:42:07,089 | INFO     | PID=664938 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 05:43:16] 2026-02-01 04:42:08,089 | INFO     | time since job start (5043s) is within the limit (349056.0s)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | WARNING  | process 669360 can no longer be monitored (due to stat problems) - aborting
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994437888/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994437888/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | WARNING  | maxPSS not found in memory monitor output
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1972351 B
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15602 B
[2026-02-01 05:43:16] 2026-02-01 04:42:08,406 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 05:43:16] 2026-02-01 04:42:08,416 | INFO     | sufficient remaining disk space (336285663232 B)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,416 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,416 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6994437888: 2271259 B (within 5033164800 B limit)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,417 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6994437888/HITS.48317931._008335.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,417 | INFO     | total size of present files: 0 B (workdir size: 2271259 B)
[2026-02-01 05:43:16] 2026-02-01 04:42:08,417 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6994437888/HITS.48317931._008335.pool.root.1 since it does not exist
[2026-02-01 05:43:16] 2026-02-01 04:42:08,460 | INFO     | number of running child processes to parent process 669360: 1
[2026-02-01 05:43:16] 2026-02-01 04:42:08,461 | INFO     | maximum number of monitored processes: 6
[2026-02-01 05:43:16] 2026-02-01 04:42:09,359 | INFO     | job 6994437888 has state=finished
[2026-02-01 05:43:16] 2026-02-01 04:42:09,359 | INFO     | preparing for final server update for job 6994437888 in state='finished'
[2026-02-01 05:43:16] 2026-02-01 04:42:09,360 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6994437888/jobReport.json
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | this job has now completed (state=finished)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | log transfer has been attempted: DONE
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | job 6994437888 has finished - writing final server update
[2026-02-01 05:43:16] 2026-02-01 04:42:09,361 | INFO     | total number of processed events: 400 (read)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6994437888/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | INFO     | extracted standard info from prmon json
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 05:43:16] 2026-02-01 04:42:09,363 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | fitting pss+swap vs Time
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | sum of square deviations: 136095575.0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | sum of deviations: -14689396732.500002
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | mean x: 1769918493.5
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | mean y: 2550031.8552631577
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | intersect: 191037673217.9708
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | chi2: 0.03972224998728315
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | current memory leak: -107.93 B/s (using 76 data points, chi2=0.04)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,364 | INFO     | could have reported an average CPU frequency of 3754 MHz (6 samples)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | ..............................
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . Timing measurements:
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . get job = 0 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . initial setup = 3 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . payload setup = 2 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . stage-in = 0 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . payload execution = 5022 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . stage-out = 0 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | . log creation = 0 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,365 | INFO     | ..............................
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | 
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | job summary report
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | --------------------------------------------------
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | PanDA job id: 6994437888
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | task id: 48317931
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | errors: (none)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | pilot state: finished 
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | transexitcode: 0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | exeerrorcode: 0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | exeerrordiag: 
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | exitcode: 0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | exitmsg: OK
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | cpuconsumptiontime: 14464 s
[2026-02-01 05:43:16] 2026-02-01 04:42:09,396 | INFO     | nevents: 400
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | neventsw: 0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | pid: 669360
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | pgrp: 669360
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | corecount: 3
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | event service: False
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | sizes: {0: 2278212, 10: 2278212, 5029: 2304645, 5031: 2313705, 5034: 2313871}
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | --------------------------------------------------
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | 
[2026-02-01 05:43:16] 2026-02-01 04:42:09,397 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-01 05:43:16] 2026-02-01 04:42:09,409 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,410 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 05:43:16] 2026-02-01 04:42:09,411 | INFO     | job 6994437888 has completed (purged errors)
[2026-02-01 05:43:16] 2026-02-01 04:42:09,411 | INFO     | overall cleanup function is called
[2026-02-01 05:43:16] 2026-02-01 04:42:10,417 | INFO     | --- collectZombieJob: --- 10, [669360]
[2026-02-01 05:43:16] 2026-02-01 04:42:10,417 | INFO     | zombie collector waiting for pid 669360
[2026-02-01 05:43:16] 2026-02-01 04:42:10,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 05:43:16] 2026-02-01 04:42:10,418 | INFO     | collected zombie processes
[2026-02-01 05:43:16] 2026-02-01 04:42:10,418 | INFO     | will attempt to kill all subprocesses of pid=669360
[2026-02-01 05:43:16] 2026-02-01 04:42:10,466 | INFO     | process IDs to be killed: [669360] (in reverse order)
[2026-02-01 05:43:16] 2026-02-01 04:42:10,491 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 05:43:16] 2026-02-01 04:42:10,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 05:43:16] 2026-02-01 04:42:10,493 | INFO     | did not find any defunct processes belonging to 669360
[2026-02-01 05:43:16] 2026-02-01 04:42:10,494 | INFO     | did not find any defunct processes belonging to 669360
[2026-02-01 05:43:16] 2026-02-01 04:42:10,494 | INFO     | ready for new job
[2026-02-01 05:43:16] 2026-02-01 04:42:10,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | **************************************
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | **************************************
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | 
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | architecture information:
[2026-02-01 05:43:16] 2026-02-01 04:42:10,495 | INFO     | executing command: cat /etc/os-release
[2026-02-01 05:43:16] 2026-02-01 04:42:10,503 | INFO     | cat /etc/os-release:
[2026-02-01 05:43:16] NAME="CentOS Linux"
[2026-02-01 05:43:16] VERSION="7 (Core)"
[2026-02-01 05:43:16] ID="centos"
[2026-02-01 05:43:16] ID_LIKE="rhel fedora"
[2026-02-01 05:43:16] VERSION_ID="7"
[2026-02-01 05:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 05:43:16] ANSI_COLOR="0;31"
[2026-02-01 05:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 05:43:16] HOME_URL="https://www.centos.org/"
[2026-02-01 05:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 05:43:16] 
[2026-02-01 05:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 05:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 05:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 05:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 05:43:16] 
[2026-02-01 05:43:16] 2026-02-01 04:42:10,504 | INFO     | **************************************
[2026-02-01 05:43:16] 2026-02-01 04:42:11,007 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | INFO     | sufficient remaining disk space (336288808960 B)
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | INFO     | update_server=False
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 05:43:16] 2026-02-01 04:42:11,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 05:43:16] 2026-02-01 04:42:11,063 | INFO     | all payload control threads have been joined
[2026-02-01 05:43:16] 2026-02-01 04:42:11,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 05:43:16] 2026-02-01 04:42:11,965 | INFO     | aborting loop
[2026-02-01 05:43:16] 2026-02-01 04:42:12,020 | INFO     | [job] retrieve thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:12,025 | INFO     | [job] queue monitor thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:12,062 | INFO     | all data control threads have been joined
[2026-02-01 05:43:16] 2026-02-01 04:42:12,069 | INFO     | [payload] control thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:12,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 05:43:16] 2026-02-01 04:42:12,454 | INFO     | [payload] validate_post thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:12,553 | INFO     | all job control threads have been joined
[2026-02-01 05:43:16] 2026-02-01 04:42:12,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 05:43:16] 2026-02-01 04:42:12,970 | INFO     | [job] job monitor thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,067 | INFO     | [data] control thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,138 | INFO     | [job] validate thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,251 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,255 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,310 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,360 | INFO     | [data] copytool_in thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,535 | INFO     | [payload] failed_post thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:13,558 | INFO     | [job] control thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:14,195 | INFO     | [data] copytool_out thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:16,719 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:21,788 | INFO     | job.realtimelogging is not enabled
[2026-02-01 05:43:16] 2026-02-01 04:42:22,794 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 05:43:16] 2026-02-01 04:42:41,244 | INFO     | PID=664938 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 05:43:16] 2026-02-01 04:42:41,245 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 05:43:16] 2026-02-01 04:42:41,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 05:43:16] 2026-02-01 04:42:41,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 05:43:16] 2026-02-01 04:43:10,771 | INFO     | [monitor] cgroup control has ended
[2026-02-01 05:43:16] 2026-02-01 04:43:11,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139815140656960)>', '<ExcThread(monitor, started 139814649186048)>']
[2026-02-01 05:43:16] 2026-02-01 04:43:11,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 05:43:16] 2026-02-01 04:43:11,394 | INFO     | [monitor] control thread has ended
[2026-02-01 05:43:16] 2026-02-01 04:43:16,061 | INFO     | all workflow threads have been joined
[2026-02-01 05:43:16] 2026-02-01 04:43:16,062 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 05:43:16] 2026-02-01 04:43:16,062 | INFO     | traces error code: 0
[2026-02-01 05:43:16] 2026-02-01 04:43:16,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 05:43:16] 2026-02-01 04:43:16,109 [wrapper] ==== pilot stdout END ====
[2026-02-01 05:43:16] 2026-02-01 04:43:16,112 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 05:43:16] 2026-02-01 04:43:16,114 [wrapper] pilotpid: 664938
[2026-02-01 05:43:16] 2026-02-01 04:43:16,116 [wrapper] Pilot exit status: 0
[2026-02-01 05:43:16] 2026-02-01 04:43:16,123 [wrapper] pandaids: 6994437888
[2026-02-01 05:43:16] 2026-02-01 04:43:16,141 [wrapper] cleanup supervisor_pilot  675019 664939
[2026-02-01 05:43:16] 2026-02-01 04:43:16,143 [wrapper] Test setup, not cleaning
[2026-02-01 05:43:16] 2026-02-01 04:43:16,145 [wrapper] apfmon messages muted
[2026-02-01 05:43:16] 2026-02-01 04:43:16,148 [wrapper] ==== wrapper stdout END ====
[2026-02-01 05:43:16] 2026-02-01 04:43:16,150 [wrapper] ==== wrapper stderr END ====
[2026-02-01 05:43:16]  *** Error codes and diagnostics ***
[2026-02-01 05:43:16]     "exeErrorCode": 0,
[2026-02-01 05:43:16]     "exeErrorDiag": "",
[2026-02-01 05:43:16]     "pilotErrorCode": 0,
[2026-02-01 05:43:16]     "pilotErrorDiag": "",
[2026-02-01 05:43:16]  *** Listing of results directory ***
[2026-02-01 05:43:16] total 678068
[2026-02-01 05:43:16] -rwx------ 1 boinc boinc     36322 Jan 31 08:30 runpilot2-wrapper.sh
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc      5111 Jan 31 08:30 queuedata.json
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc    584422 Jan 31 08:31 pilot3.tar.gz
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc       100 Feb  1 04:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 05:43:16] -rwxr-xr-x 1 boinc boinc      7986 Feb  1 04:17 run_atlas
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc       105 Feb  1 04:17 job.xml
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc 505614988 Feb  1 04:17 EVNT.48317929._000148.pool.root.1
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc    597753 Feb  1 04:17 input.tar.gz
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:17 start_atlas.sh
[2026-02-01 05:43:16] drwxrwx--x 2 boinc boinc      4096 Feb  1 04:17 shared
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:17 boinc_setup_complete
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc      6440 Feb  1 04:17 init_data.xml
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc         0 Feb  1 04:17 boinc_lockfile
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc      2510 Feb  1 04:17 pandaJob.out
[2026-02-01 05:43:16] -rw------- 1 boinc boinc   1010520 Feb  1 04:18 agis_schedconf.cvmfs.json
[2026-02-01 05:43:16] -rw------- 1 boinc boinc   1511668 Feb  1 04:18 agis_ddmendpoints.agis.ALL.json
[2026-02-01 05:43:16] -rw------- 1 boinc boinc       428 Feb  1 04:18 workernode_map.json
[2026-02-01 05:43:16] drwx------ 5 boinc boinc      4096 Feb  1 04:18 pilot3
[2026-02-01 05:43:16] -rw------- 1 boinc boinc 182809951 Feb  1 05:41 HITS.48317931._008335.pool.root.1
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc       530 Feb  1 05:41 boinc_task_state.xml
[2026-02-01 05:43:16] -rw------- 1 boinc boinc      1021 Feb  1 05:42 memory_monitor_summary.json
[2026-02-01 05:43:16] -rw------- 1 boinc boinc    249265 Feb  1 05:42 log.48317931._008335.job.log.tgz.1
[2026-02-01 05:43:16] -rw------- 1 boinc boinc      6318 Feb  1 05:42 heartbeat.json
[2026-02-01 05:43:16] -rw------- 1 boinc boinc        95 Feb  1 05:42 pilot_heartbeat.json
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc      8192 Feb  1 05:43 boinc_mmap_file
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc        27 Feb  1 05:43 wrapper_checkpoint.txt
[2026-02-01 05:43:16] -rw------- 1 boinc boinc      4819 Feb  1 05:43 pilotlog.txt
[2026-02-01 05:43:16] -rw------- 1 boinc boinc    738388 Feb  1 05:43 log.48317931._008335.job.log.1
[2026-02-01 05:43:16] -rw------- 1 boinc boinc       357 Feb  1 05:43 output.list
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc       620 Feb  1 05:43 runtime_log
[2026-02-01 05:43:16] -rw------- 1 boinc boinc   1003520 Feb  1 05:43 result.tar.gz
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc      8906 Feb  1 05:43 runtime_log.err
[2026-02-01 05:43:16] -rw------- 1 boinc boinc       659 Feb  1 05:43 cKGKDmVcK68n9Rq4apOajLDm4fhM0noT9bVooX4SDmF2MKDmP2E0vm.diag
[2026-02-01 05:43:16] -rw-r--r-- 1 boinc boinc     22589 Feb  1 05:43 stderr.txt
[2026-02-01 05:43:16] HITS file was successfully produced:
[2026-02-01 05:43:16] -rw------- 1 boinc boinc 182809951 Feb  1 05:41 shared/HITS.pool.root.1
[2026-02-01 05:43:16]  *** Contents of shared directory: ***
[2026-02-01 05:43:16] total 673884
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc 505614988 Feb  1 04:17 ATLAS.root_0
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc    597753 Feb  1 04:17 input.tar.gz
[2026-02-01 05:43:16] -rw-r--r-- 2 boinc boinc     15845 Feb  1 04:17 start_atlas.sh
[2026-02-01 05:43:16] -rw------- 1 boinc boinc 182809951 Feb  1 05:41 HITS.pool.root.1
[2026-02-01 05:43:16] -rw------- 1 boinc boinc   1003520 Feb  1 05:43 result.tar.gz
05:43:17 (660894): run_atlas exited; CPU time 14491.806127
05:43:17 (660894): called boinc_finish(0)

</stderr_txt>
]]>

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