Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:12 (2133253): wrapper (7.7.26015): starting
22:52:12 (2133253): wrapper: running run_atlas (--nthreads 3)
[2026-01-31 22:52:12] Arguments: --nthreads 3
[2026-01-31 22:52:12] Threads: 3
[2026-01-31 22:52:12] Checking for CVMFS
[2026-01-31 22:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 22:52:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 22:52:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 22:52:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 22:52:13] 2.9.2.0 1381994 4690 84308 155727 3 50 25816683 36864001 0 130560 0 2159816 99.987 147040 16975 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-31 22:52:13] CVMFS is ok
[2026-01-31 22:52:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 22:52:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 22:52:13] Further information can be found at the LHC@home message board.
[2026-01-31 22:52:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 22:52:13] Checking for apptainer binary...
[2026-01-31 22:52:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 22:52:13] Running /usr/bin/apptainer --version
[2026-01-31 22:52:13] apptainer version 1.4.1-1.1
[2026-01-31 22:52:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 22:52:13] magicA161a
[2026-01-31 22:52:13] apptainer works
[2026-01-31 22:52:13] Set ATHENA_PROC_NUMBER=3
[2026-01-31 22:52:13] Set ATHENA_CORE_NUMBER=3
[2026-01-31 22:52:13] Starting ATLAS job with PandaID=6994435910
[2026-01-31 22:52:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 00:14:56]  *** The last 200 lines of the pilot log: ***
[2026-02-01 00:14:56] 2026-01-31 23:14:25,420 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 00:14:56] 2026-01-31 23:14:25,421 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 00:14:56] 2026-01-31 23:14:25,422 | INFO     | did not find any defunct processes belonging to 2141722
[2026-02-01 00:14:56] 2026-01-31 23:14:25,423 | INFO     | did not find any defunct processes belonging to 2141722
[2026-02-01 00:14:56] 2026-01-31 23:14:25,423 | INFO     | ready for new job
[2026-02-01 00:14:56] 2026-01-31 23:14:25,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | **************************************
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | **************************************
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | 
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | architecture information:
[2026-02-01 00:14:56] 2026-01-31 23:14:25,424 | INFO     | executing command: cat /etc/os-release
[2026-02-01 00:14:56] 2026-01-31 23:14:25,433 | INFO     | cat /etc/os-release:
[2026-02-01 00:14:56] NAME="CentOS Linux"
[2026-02-01 00:14:56] VERSION="7 (Core)"
[2026-02-01 00:14:56] ID="centos"
[2026-02-01 00:14:56] ID_LIKE="rhel fedora"
[2026-02-01 00:14:56] VERSION_ID="7"
[2026-02-01 00:14:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 00:14:56] ANSI_COLOR="0;31"
[2026-02-01 00:14:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 00:14:56] HOME_URL="https://www.centos.org/"
[2026-02-01 00:14:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 00:14:56] 
[2026-02-01 00:14:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 00:14:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 00:14:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 00:14:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 00:14:56] 
[2026-02-01 00:14:56] 2026-01-31 23:14:25,433 | INFO     | **************************************
[2026-02-01 00:14:56] 2026-01-31 23:14:25,935 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | INFO     | sufficient remaining disk space (375978459136 B)
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | INFO     | update_server=False
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 00:14:56] 2026-01-31 23:14:25,948 | INFO     | aborting loop
[2026-02-01 00:14:56] 2026-01-31 23:14:26,100 | INFO     | all payload control threads have been joined
[2026-02-01 00:14:56] 2026-01-31 23:14:26,608 | INFO     | all job control threads have been joined
[2026-02-01 00:14:56] 2026-01-31 23:14:26,949 | INFO     | [job] retrieve thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:26,949 | INFO     | [job] job monitor thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:26,988 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,046 | INFO     | all data control threads have been joined
[2026-02-01 00:14:56] 2026-01-31 23:14:27,094 | INFO     | [data] copytool_in thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,105 | INFO     | [payload] control thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,395 | INFO     | [payload] validate_post thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,613 | INFO     | [job] control thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,776 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,955 | INFO     | [data] copytool_out thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:27,992 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:28,052 | INFO     | [data] control thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:28,149 | INFO     | [monitor] cgroup control has ended
[2026-02-01 00:14:56] 2026-01-31 23:14:28,343 | INFO     | [job] validate thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:28,386 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:28,472 | INFO     | [payload] failed_post thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:28,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 00:14:56] 2026-01-31 23:14:28,942 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 00:14:56] 2026-01-31 23:14:29,948 | INFO     | [job] queue monitor thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:32,490 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 00:14:56] 2026-01-31 23:14:33,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081451759424)>', '<ExcThread(monitor, started 140080828118784)>']
[2026-02-01 00:14:56] 2026-01-31 23:14:38,403 | INFO     | all workflow threads have been joined
[2026-02-01 00:14:56] 2026-01-31 23:14:38,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 00:14:56] 2026-01-31 23:14:38,404 | INFO     | traces error code: 0
[2026-02-01 00:14:56] 2026-01-31 23:14:38,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | INFO     | PID=2137297 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 00:14:56] 2026-01-31 23:14:56,472 | INFO     | [monitor] control thread has ended
[2026-02-01 00:14:56] 2026-01-31 23:14:56,519 [wrapper] ==== pilot stdout END ====
[2026-02-01 00:14:56] 2026-01-31 23:14:56,521 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 00:14:56] 2026-01-31 23:14:56,524 [wrapper] pilotpid: 2137297
[2026-02-01 00:14:56] 2026-01-31 23:14:56,526 [wrapper] Pilot exit status: 0
[2026-02-01 00:14:56] 2026-01-31 23:14:56,533 [wrapper] pandaids: 6994435910
[2026-02-01 00:14:56] 2026-01-31 23:14:56,548 [wrapper] cleanup supervisor_pilot 2147015 2137298
[2026-02-01 00:14:56] 2026-01-31 23:14:56,551 [wrapper] Test setup, not cleaning
[2026-02-01 00:14:56] 2026-01-31 23:14:56,553 [wrapper] apfmon messages muted
[2026-02-01 00:14:56] 2026-01-31 23:14:56,555 [wrapper] ==== wrapper stdout END ====
[2026-02-01 00:14:56] 2026-01-31 23:14:56,557 [wrapper] ==== wrapper stderr END ====
[2026-02-01 00:14:56]  *** Error codes and diagnostics ***
[2026-02-01 00:14:56]     "exeErrorCode": 0,
[2026-02-01 00:14:56]     "exeErrorDiag": "",
[2026-02-01 00:14:56]     "pilotErrorCode": 0,
[2026-02-01 00:14:56]     "pilotErrorDiag": "",
[2026-02-01 00:14:56]  *** Listing of results directory ***
[2026-02-01 00:14:56] total 676060
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc    584422 Jan 31 05:35 pilot3.tar.gz
[2026-02-01 00:14:56] -rwx------ 1 boinc boinc     36322 Jan 31 06:28 runpilot2-wrapper.sh
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      5111 Jan 31 06:30 queuedata.json
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc       100 Jan 31 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 00:14:56] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 22:52 run_atlas
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc       105 Jan 31 22:52 job.xml
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc 504426939 Jan 31 22:52 EVNT.48317929._000129.pool.root.1
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc    597753 Jan 31 22:52 input.tar.gz
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc     15845 Jan 31 22:52 start_atlas.sh
[2026-02-01 00:14:56] drwxrwx--x 2 boinc boinc      4096 Jan 31 22:52 shared
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc         0 Jan 31 22:52 boinc_setup_complete
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      6448 Jan 31 22:52 init_data.xml
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc         0 Jan 31 22:52 boinc_lockfile
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      2510 Jan 31 22:52 pandaJob.out
[2026-02-01 00:14:56] -rw------- 1 boinc boinc   1010528 Jan 31 22:52 agis_schedconf.cvmfs.json
[2026-02-01 00:14:56] -rw------- 1 boinc boinc   1511668 Jan 31 22:52 agis_ddmendpoints.agis.ALL.json
[2026-02-01 00:14:56] -rw------- 1 boinc boinc       426 Jan 31 22:52 workernode_map.json
[2026-02-01 00:14:56] drwx------ 5 boinc boinc      4096 Jan 31 22:52 pilot3
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc       530 Feb  1 00:14 boinc_task_state.xml
[2026-02-01 00:14:56] -rw------- 1 boinc boinc 181995735 Feb  1 00:14 HITS.48317931._007386.pool.root.1
[2026-02-01 00:14:56] -rw------- 1 boinc boinc      1015 Feb  1 00:14 memory_monitor_summary.json
[2026-02-01 00:14:56] -rw------- 1 boinc boinc    248176 Feb  1 00:14 log.48317931._007386.job.log.tgz.1
[2026-02-01 00:14:56] -rw------- 1 boinc boinc      6306 Feb  1 00:14 heartbeat.json
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      8192 Feb  1 00:14 boinc_mmap_file
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc        27 Feb  1 00:14 wrapper_checkpoint.txt
[2026-02-01 00:14:56] -rw------- 1 boinc boinc       747 Feb  1 00:14 pilotlog.txt
[2026-02-01 00:14:56] -rw------- 1 boinc boinc        95 Feb  1 00:14 pilot_heartbeat.json
[2026-02-01 00:14:56] -rw------- 1 boinc boinc    721316 Feb  1 00:14 log.48317931._007386.job.log.1
[2026-02-01 00:14:56] -rw------- 1 boinc boinc       357 Feb  1 00:14 output.list
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc       620 Feb  1 00:14 runtime_log
[2026-02-01 00:14:56] -rw------- 1 boinc boinc    983040 Feb  1 00:14 result.tar.gz
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      8916 Feb  1 00:14 runtime_log.err
[2026-02-01 00:14:56] -rw------- 1 boinc boinc       661 Feb  1 00:14 C9zMDmciI68n9Rq4apOajLDm4fhM0noT9bVooX4SDmltMKDmG4Ucfm.diag
[2026-02-01 00:14:56] -rw-r--r-- 1 boinc boinc      9971 Feb  1 00:14 stderr.txt
[2026-02-01 00:14:56] HITS file was successfully produced:
[2026-02-01 00:14:56] -rw------- 1 boinc boinc 181995735 Feb  1 00:14 shared/HITS.pool.root.1
[2026-02-01 00:14:56]  *** Contents of shared directory: ***
[2026-02-01 00:14:56] total 671908
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc 504426939 Jan 31 22:52 ATLAS.root_0
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc    597753 Jan 31 22:52 input.tar.gz
[2026-02-01 00:14:56] -rw-r--r-- 2 boinc boinc     15845 Jan 31 22:52 start_atlas.sh
[2026-02-01 00:14:56] -rw------- 1 boinc boinc 181995735 Feb  1 00:14 HITS.pool.root.1
[2026-02-01 00:14:56] -rw------- 1 boinc boinc    983040 Feb  1 00:14 result.tar.gz
00:14:57 (2133253): run_atlas exited; CPU time 14093.263031
00:14:57 (2133253): called boinc_finish(0)

</stderr_txt>
]]>

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