Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:09:40 (1164039): wrapper (7.7.26015): starting
06:09:40 (1164039): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 06:09:40] Arguments: --nthreads 12
[2026-01-31 06:09:40] Threads: 12
[2026-01-31 06:09:40] Checking for CVMFS
[2026-01-31 06:09:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 06:09:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 06:09:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 06:09:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 06:09:42] 2.11.5.0 4038285 123431 229252 155715 3 677 41907378 45568000 12632 130560 0 1070420707 99.798 639915777 17837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-01-31 06:09:42] CVMFS is ok
[2026-01-31 06:09:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 06:09:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 06:09:42] Further information can be found at the LHC@home message board.
[2026-01-31 06:09:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 06:09:42] Checking for apptainer binary...
[2026-01-31 06:09:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 06:09:42] Running /usr/bin/apptainer --version
[2026-01-31 06:09:42] apptainer version 1.4.1-1.el9
[2026-01-31 06:09:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 06:09:43] wns0061.triumf.lcg
[2026-01-31 06:09:43] apptainer works
[2026-01-31 06:09:43] Set ATHENA_PROC_NUMBER=12
[2026-01-31 06:09:43] Set ATHENA_CORE_NUMBER=12
[2026-01-31 06:09:43] Starting ATLAS job with PandaID=6991146769
[2026-01-31 06:09:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 06:15:03]  *** The last 200 lines of the pilot log: ***
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | wrong length of table data, x=[1769868710.0], y=[1948.0] (must be same and length>=4)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . Timing measurements:
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . get job = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . initial setup = 37 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload setup = 44 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-in = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload execution = 39 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-out = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . log creation = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6991146769/pilotlog.txt
[2026-01-31 06:15:03] 2026-01-31 14:14:27,098 | INFO     | time since job start (224s) is within the limit (349056.0s)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,268 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-31 06:15:03] - Log from pilotlog.txt -
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | INFO     | extracted standard info from prmon json
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | wrong length of table data, x=[1769868710.0], y=[1948.0] (must be same and length>=4)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . Timing measurements:
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . get job = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . initial setup = 37 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload setup = 44 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-in = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload execution = 39 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-out = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . log creation = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6991146769/pilotlog.txt
[2026-01-31 06:15:03] 2026-01-31 14:14:27,098 | INFO     | time since job start (224s) is within the limit (349056.0s)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,268 | WARNING  | 
[2026-01-31 06:15:03] [begin log extracts]
[2026-01-31 06:15:03] - Log from pilotlog.txt -
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | INFO     | extracted standard info from prmon json
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 06:15:03] 2026-01-31 14:14:27,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | WARNING  | wrong length of table data, x=[1769868710.0], y=[1948.0] (must be same and length>=4)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,052 | INFO     | could have reported an average CPU frequency of 2569 MHz (4 samples)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . Timing measurements:
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . get job = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . initial setup = 37 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload setup = 44 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-in = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . payload execution = 39 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . stage-out = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | . log creation = 0 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | ..............................
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-31 06:15:03] 2026-01-31 14:14:27,053 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6991146769/pilotlog.txt
[2026-01-31 06:15:03] 2026-01-31 14:14:27,098 | INFO     | time since job start (224s) is within the limit (349056.0s)
[2026-01-31 06:15:03] [end log extracts]
[2026-01-31 06:15:03] 2026-01-31 14:14:27,268 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,269 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-31 06:15:03] 2026-01-31 14:14:27,915 | INFO     | 
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | job summary report
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | --------------------------------------------------
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | PanDA job id: 6991146769
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | task id: 48329101
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-31 06:12:16,568 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | pilot state: failed 
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | transexitcode: 65
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | exeerrorcode: 65
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | exitcode: 65
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | cpuconsumptiontime: 15 s
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | nevents: 0
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | neventsw: 0
[2026-01-31 06:15:03] 2026-01-31 14:14:27,916 | INFO     | pid: 1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | pgrp: 1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | corecount: 12
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | event service: False
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | sizes: {0: 2277948, 1: 2277976, 2: 2278437, 13: 2278437, 89: 2301674, 91: 2305966, 92: 2306122, 211: 2306288}
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | --------------------------------------------------
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | 
[2026-01-31 06:15:03] 2026-01-31 14:14:27,917 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | job 6991146769 has completed (purged errors)
[2026-01-31 06:15:03] 2026-01-31 14:14:28,286 | INFO     | overall cleanup function is called
[2026-01-31 06:15:03] 2026-01-31 14:14:29,309 | INFO     | --- collectZombieJob: --- 10, [1172560]
[2026-01-31 06:15:03] 2026-01-31 14:14:29,310 | INFO     | zombie collector waiting for pid 1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:29,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 06:15:03] 2026-01-31 14:14:29,310 | INFO     | collected zombie processes
[2026-01-31 06:15:03] 2026-01-31 14:14:29,310 | INFO     | will attempt to kill all subprocesses of pid=1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:29,908 | INFO     | process IDs to be killed: [1172560] (in reverse order)
[2026-01-31 06:15:03] 2026-01-31 14:14:30,699 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 06:15:03] 2026-01-31 14:14:30,699 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 06:15:03] 2026-01-31 14:14:30,719 | INFO     | did not find any defunct processes belonging to 1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:30,744 | INFO     | did not find any defunct processes belonging to 1172560
[2026-01-31 06:15:03] 2026-01-31 14:14:30,745 | INFO     | ready for new job
[2026-01-31 06:15:03] 2026-01-31 14:14:30,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 06:15:03] 2026-01-31 14:14:30,746 | INFO     | **************************************
[2026-01-31 06:15:03] 2026-01-31 14:14:30,746 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 06:15:03] 2026-01-31 14:14:30,746 | INFO     | **************************************
[2026-01-31 06:15:03] 2026-01-31 14:14:30,746 | INFO     | 
[2026-01-31 06:15:03] 2026-01-31 14:14:30,758 | INFO     | architecture information:
[2026-01-31 06:15:03] 2026-01-31 14:14:30,762 | INFO     | executing command: cat /etc/os-release
[2026-01-31 06:15:03] 2026-01-31 14:14:30,857 | INFO     | cat /etc/os-release:
[2026-01-31 06:15:03] NAME="CentOS Linux"
[2026-01-31 06:15:03] VERSION="7 (Core)"
[2026-01-31 06:15:03] ID="centos"
[2026-01-31 06:15:03] ID_LIKE="rhel fedora"
[2026-01-31 06:15:03] VERSION_ID="7"
[2026-01-31 06:15:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 06:15:03] ANSI_COLOR="0;31"
[2026-01-31 06:15:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 06:15:03] HOME_URL="https://www.centos.org/"
[2026-01-31 06:15:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 06:15:03] 
[2026-01-31 06:15:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 06:15:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 06:15:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 06:15:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 06:15:03] 
[2026-01-31 06:15:03] 2026-01-31 14:14:30,857 | INFO     | **************************************
[2026-01-31 06:15:03] 2026-01-31 14:14:31,361 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-31 06:15:03] 2026-01-31 14:14:31,513 | INFO     | sufficient remaining disk space (2113597865984 B)
[2026-01-31 06:15:03] 2026-01-31 14:14:31,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 06:15:03] 2026-01-31 14:14:31,514 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 06:15:03] 2026-01-31 14:14:31,514 | INFO     | update_server=False
[2026-01-31 06:15:03] 2026-01-31 14:14:31,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 06:15:03] 2026-01-31 14:14:31,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 06:15:03] 2026-01-31 14:14:31,516 | INFO     | aborting loop
[2026-01-31 06:15:03] 2026-01-31 14:14:31,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 06:15:03] 2026-01-31 14:14:31,707 | INFO     | all data control threads have been joined
[2026-01-31 06:15:03] 2026-01-31 14:14:32,519 | INFO     | [job] retrieve thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:32,522 | INFO     | [job] job monitor thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:32,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 06:15:03] 2026-01-31 14:14:32,712 | INFO     | [payload] failed_post thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:32,714 | INFO     | [data] control thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:32,794 | INFO     | all payload control threads have been joined
[2026-01-31 06:15:03] 2026-01-31 14:14:32,806 | INFO     | [payload] validate_post thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:32,933 | INFO     | all job control threads have been joined
[2026-01-31 06:15:03] 2026-01-31 14:14:32,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 06:15:03] 2026-01-31 14:14:33,237 | INFO     | [job] validate thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,339 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,339 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,339 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,571 | INFO     | [data] copytool_out thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,800 | INFO     | [data] copytool_in thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,801 | INFO     | [payload] control thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,940 | INFO     | [job] control thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:33,975 | INFO     | [job] queue monitor thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:36,620 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 06:15:03] 2026-01-31 14:14:42,939 | INFO     | [monitor] cgroup control has ended
[2026-01-31 06:15:03] 2026-01-31 14:14:43,030 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140085006587712)>', '<ExcThread(monitor, started 140084233885440)>']
[2026-01-31 06:15:03] 2026-01-31 14:14:48,055 | INFO     | all workflow threads have been joined
[2026-01-31 06:15:03] 2026-01-31 14:14:48,056 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 06:15:03] 2026-01-31 14:14:48,056 | INFO     | traces error code: 0
[2026-01-31 06:15:03] 2026-01-31 14:14:48,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 06:15:03] 2026-01-31 14:15:01,056 | INFO     | PID=1167731 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | INFO     | .. there are 14 such processes running
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 06:15:03] 2026-01-31 14:15:01,057 | INFO     | [monitor] control thread has ended
[2026-01-31 06:15:03] 2026-01-31 14:15:01,940 [wrapper] ==== pilot stdout END ====
[2026-01-31 06:15:03] 2026-01-31 14:15:02,012 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 06:15:03] 2026-01-31 14:15:02,040 [wrapper] pilotpid: 1167731
[2026-01-31 06:15:03] 2026-01-31 14:15:02,077 [wrapper] Pilot exit status: 0
[2026-01-31 06:15:03] 2026-01-31 14:15:02,283 [wrapper] pandaids: 6991146769
[2026-01-31 06:15:03] 2026-01-31 14:15:02,666 [wrapper] cleanup supervisor_pilot 1167737 1167732
[2026-01-31 06:15:03] 2026-01-31 14:15:02,702 [wrapper] Test setup, not cleaning
[2026-01-31 06:15:03] 2026-01-31 14:15:02,763 [wrapper] apfmon messages muted
[2026-01-31 06:15:03] 2026-01-31 14:15:02,817 [wrapper] ==== wrapper stdout END ====
[2026-01-31 06:15:03] 2026-01-31 14:15:02,859 [wrapper] ==== wrapper stderr END ====
[2026-01-31 06:15:03]  *** Error codes and diagnostics ***
[2026-01-31 06:15:03]     "exeErrorCode": 65,
[2026-01-31 06:15:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-31 06:15:03]     "pilotErrorCode": 1305,
[2026-01-31 06:15:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-31 06:15:03]  *** Listing of results directory ***
[2026-01-31 06:15:03] total 271348
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc      5111 Jan 31 01:27 queuedata.json
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc    584422 Jan 31 01:27 pilot3.tar.gz
[2026-01-31 06:15:03] -rwx------. 1 boinc boinc     36322 Jan 31 01:27 runpilot2-wrapper.sh
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc       100 Jan 31 06:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 06:15:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan 31 06:09 run_atlas
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc       105 Jan 31 06:09 job.xml
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc      6594 Jan 31 06:09 init_data.xml
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc 273714852 Jan 31 06:09 EVNT.48329099._000003.pool.root.1
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc     15845 Jan 31 06:09 start_atlas.sh
[2026-01-31 06:15:03] drwxrwx--x. 2 boinc boinc      4096 Jan 31 06:09 shared
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc    597770 Jan 31 06:09 input.tar.gz
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc         0 Jan 31 06:09 boinc_lockfile
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc      2606 Jan 31 06:09 pandaJob.out
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc   1010520 Jan 31 06:10 agis_schedconf.cvmfs.json
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc   1511668 Jan 31 06:10 agis_ddmendpoints.agis.ALL.json
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc       445 Jan 31 06:10 workernode_map.json
[2026-01-31 06:15:03] drwx------. 5 boinc boinc      4096 Jan 31 06:10 pilot3
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc       523 Jan 31 06:12 boinc_task_state.xml
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc       955 Jan 31 06:12 memory_monitor_summary.json
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc     21657 Jan 31 06:12 log.48329101._000052.job.log.tgz.1
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc        95 Jan 31 06:14 pilot_heartbeat.json
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc      7011 Jan 31 06:14 heartbeat.json
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc       823 Jan 31 06:15 pilotlog.txt
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc      8192 Jan 31 06:15 boinc_mmap_file
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc        22 Jan 31 06:15 wrapper_checkpoint.txt
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc     87994 Jan 31 06:15 log.48329101._000052.job.log.1
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc       188 Jan 31 06:15 output.list
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc       620 Jan 31 06:15 runtime_log
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc    122880 Jan 31 06:15 result.tar.gz
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc      8635 Jan 31 06:15 runtime_log.err
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc       643 Jan 31 06:15 2WNKDmuRM68n9Rq4apOajLDm4fhM0noT9bVooX4SDmVINKDmlnwzvn.diag
[2026-01-31 06:15:03] -rw-r--r--. 1 boinc boinc     21219 Jan 31 06:15 stderr.txt
[2026-01-31 06:15:03] No HITS result produced
[2026-01-31 06:15:03]  *** Contents of shared directory: ***
[2026-01-31 06:15:03] total 268024
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc 273714852 Jan 31 06:09 ATLAS.root_0
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc     15845 Jan 31 06:09 start_atlas.sh
[2026-01-31 06:15:03] -rw-r--r--. 2 boinc boinc    597770 Jan 31 06:09 input.tar.gz
[2026-01-31 06:15:03] -rw-------. 1 boinc boinc    122880 Jan 31 06:15 result.tar.gz
06:15:05 (1164039): run_atlas exited; CPU time 22.754136
06:15:05 (1164039): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN