Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:25 (26435): wrapper (7.7.26015): starting
17:31:25 (26435): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 17:31:25] Arguments: --nthreads 8
[2026-01-31 17:31:25] Threads: 8
[2026-01-31 17:31:25] Checking for CVMFS
[2026-01-31 17:31:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 17:31:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 17:31:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 17:31:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 17:31:29] 2.11.2.0 11585 67337 135520 155720 1 53 19266813 25165824 1027 130560 0 24782601 99.848 16962157 3245 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-31 17:31:29] CVMFS is ok
[2026-01-31 17:31:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 17:31:29] Checking for apptainer binary...
[2026-01-31 17:31:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 17:31:29] Running /usr/bin/apptainer --version
[2026-01-31 17:31:29] apptainer version 1.3.2-1.el7
[2026-01-31 17:31:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 17:31:52] cg-vwn455.simple-grid.lan
[2026-01-31 17:31:52] apptainer works
[2026-01-31 17:31:52] Set ATHENA_PROC_NUMBER=8
[2026-01-31 17:31:52] Set ATHENA_CORE_NUMBER=8
[2026-01-31 17:31:52] Starting ATLAS job with PandaID=6990489030
[2026-01-31 17:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 21:11:03]  *** The last 200 lines of the pilot log: ***
[2026-01-31 21:11:03] 2026-01-31 20:10:04,088 | INFO     | total number of processed events: 400 (read)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,090 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6990489030/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,091 | INFO     | extracted standard info from prmon json
[2026-01-31 21:11:03] 2026-01-31 20:10:04,091 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 21:11:03] 2026-01-31 20:10:04,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 21:11:03] 2026-01-31 20:10:04,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 21:11:03] 2026-01-31 20:10:04,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 21:11:03] 2026-01-31 20:10:04,096 | INFO     | fitting pss+swap vs Time
[2026-01-31 21:11:03] 2026-01-31 20:10:04,096 | INFO     | sum of square deviations: 2671343110.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,098 | INFO     | sum of deviations: 102813291556.00003
[2026-01-31 21:11:03] 2026-01-31 20:10:04,098 | INFO     | mean x: 1769883946.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,098 | INFO     | mean y: 2395915.936585366
[2026-01-31 21:11:03] 2026-01-31 20:10:04,099 | INFO     | intersect: -68115994971.10368
[2026-01-31 21:11:03] 2026-01-31 20:10:04,099 | INFO     | chi2: 8.865206800989426
[2026-01-31 21:11:03] 2026-01-31 20:10:04,099 | INFO     | sum of square deviations: 2480604650.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,101 | INFO     | sum of deviations: 113499754737.00003
[2026-01-31 21:11:03] 2026-01-31 20:10:04,101 | INFO     | mean x: 1769883793.5
[2026-01-31 21:11:03] 2026-01-31 20:10:04,101 | INFO     | mean y: 2404246.43
[2026-01-31 21:11:03] 2026-01-31 20:10:04,102 | INFO     | intersect: -80978406813.1805
[2026-01-31 21:11:03] 2026-01-31 20:10:04,102 | INFO     | chi2: 8.19133853308991
[2026-01-31 21:11:03] 2026-01-31 20:10:04,102 | INFO     | current chi2=8.19133853308991 (change=7.601269581486893 %)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,102 | INFO     | right removable region: 199
[2026-01-31 21:11:03] 2026-01-31 20:10:04,103 | INFO     | sum of square deviations: 2480604650.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,104 | INFO     | sum of deviations: 32399938665.500008
[2026-01-31 21:11:03] 2026-01-31 20:10:04,104 | INFO     | mean x: 1769884098.5
[2026-01-31 21:11:03] 2026-01-31 20:10:04,105 | INFO     | mean y: 2452173.915
[2026-01-31 21:11:03] 2026-01-31 20:10:04,105 | INFO     | intersect: -23114547238.483818
[2026-01-31 21:11:03] 2026-01-31 20:10:04,108 | INFO     | chi2: 3.668806310972331
[2026-01-31 21:11:03] 2026-01-31 20:10:04,109 | INFO     | current chi2=3.668806310972331 (change=58.615671429538864 %)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,109 | INFO     | sum of square deviations: 2299168690.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,110 | INFO     | sum of deviations: -20449848924.999996
[2026-01-31 21:11:03] 2026-01-31 20:10:04,111 | INFO     | mean x: 1769884251.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,111 | INFO     | mean y: 2496518.7128205127
[2026-01-31 21:11:03] 2026-01-31 20:10:04,111 | INFO     | intersect: 15744649630.447643
[2026-01-31 21:11:03] 2026-01-31 20:10:04,111 | INFO     | chi2: 0.973910289341905
[2026-01-31 21:11:03] 2026-01-31 20:10:04,111 | INFO     | current chi2=0.973910289341905 (change=73.45430075092209 %)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,112 | INFO     | sum of square deviations: 2126802667.5
[2026-01-31 21:11:03] 2026-01-31 20:10:04,113 | INFO     | sum of deviations: -25620647515.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,113 | INFO     | mean x: 1769884403.5
[2026-01-31 21:11:03] 2026-01-31 20:10:04,114 | INFO     | mean y: 2501002.8736842107
[2026-01-31 21:11:03] 2026-01-31 20:10:04,114 | INFO     | intersect: 21323512649.747375
[2026-01-31 21:11:03] 2026-01-31 20:10:04,114 | INFO     | chi2: 0.8919081135987397
[2026-01-31 21:11:03] 2026-01-31 20:10:04,114 | INFO     | current chi2=0.8919081135987397 (change=8.419890070016228 %)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,114 | INFO     | left removable region: 30
[2026-01-31 21:11:03] 2026-01-31 20:10:04,115 | INFO     | sum of square deviations: 1496660620.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,116 | INFO     | sum of deviations: 3080615046.0000005
[2026-01-31 21:11:03] 2026-01-31 20:10:04,116 | INFO     | mean x: 1769884678.0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,116 | INFO     | mean y: 2496655.3786982247
[2026-01-31 21:11:03] 2026-01-31 20:10:04,116 | INFO     | intersect: -3640502496.1134186
[2026-01-31 21:11:03] 2026-01-31 20:10:04,117 | INFO     | chi2: 0.0006743851335192316
[2026-01-31 21:11:03] 2026-01-31 20:10:04,117 | INFO     | current memory leak: 2.06 B/s (using 169 data points, chi2=0.00)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,122 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,122 | INFO     | ..............................
[2026-01-31 21:11:03] 2026-01-31 20:10:04,122 | INFO     | . Timing measurements:
[2026-01-31 21:11:03] 2026-01-31 20:10:04,122 | INFO     | . get job = 0 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,122 | INFO     | . initial setup = 109 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | . payload setup = 141 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | . stage-in = 0 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | . payload execution = 12587 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | . stage-out = 3 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | . log creation = 1 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,123 | INFO     | ..............................
[2026-01-31 21:11:03] 2026-01-31 20:10:04,256 | INFO     | 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,256 | INFO     | job summary report
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | --------------------------------------------------
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | PanDA job id: 6990489030
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | task id: 48310749
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | errors: (none)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | pilot state: finished 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | transexitcode: 0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | exeerrorcode: 0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | exeerrordiag: 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,257 | INFO     | exitcode: 0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | exitmsg: OK
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | cpuconsumptiontime: 46957 s
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | nevents: 400
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | neventsw: 0
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | pid: 2431
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | pgrp: 2431
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | corecount: 8
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | event service: False
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | sizes: {0: 2277178, 1: 2252799, 2: 2278324, 12: 2278324, 12733: 2308329, 12738: 2317327, 12740: 2317511, 12741: 2317705}
[2026-01-31 21:11:03] 2026-01-31 20:10:04,258 | INFO     | --------------------------------------------------
[2026-01-31 21:11:03] 2026-01-31 20:10:04,259 | INFO     | 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,259 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-31 21:11:03] 2026-01-31 20:10:04,593 | INFO     | PID=30396 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 21:11:03] 2026-01-31 20:10:04,593 | INFO     | .. there are 2 such processes running
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | job 6990489030 has completed (purged errors)
[2026-01-31 21:11:03] 2026-01-31 20:10:04,810 | INFO     | overall cleanup function is called
[2026-01-31 21:11:03] 2026-01-31 20:10:05,818 | INFO     | --- collectZombieJob: --- 10, [2431]
[2026-01-31 21:11:03] 2026-01-31 20:10:05,818 | INFO     | zombie collector waiting for pid 2431
[2026-01-31 21:11:03] 2026-01-31 20:10:05,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 21:11:03] 2026-01-31 20:10:05,819 | INFO     | collected zombie processes
[2026-01-31 21:11:03] 2026-01-31 20:10:05,819 | INFO     | will attempt to kill all subprocesses of pid=2431
[2026-01-31 21:11:03] 2026-01-31 20:10:05,889 | INFO     | process IDs to be killed: [2431] (in reverse order)
[2026-01-31 21:11:03] 2026-01-31 20:10:06,754 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 21:11:03] 2026-01-31 20:10:06,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 21:11:03] 2026-01-31 20:10:06,757 | INFO     | did not find any defunct processes belonging to 2431
[2026-01-31 21:11:03] 2026-01-31 20:10:06,758 | INFO     | did not find any defunct processes belonging to 2431
[2026-01-31 21:11:03] 2026-01-31 20:10:06,759 | INFO     | ready for new job
[2026-01-31 21:11:03] 2026-01-31 20:10:06,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 21:11:03] 2026-01-31 20:10:06,761 | INFO     | **************************************
[2026-01-31 21:11:03] 2026-01-31 20:10:06,761 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 21:11:03] 2026-01-31 20:10:06,761 | INFO     | **************************************
[2026-01-31 21:11:03] 2026-01-31 20:10:06,761 | INFO     | 
[2026-01-31 21:11:03] 2026-01-31 20:10:06,762 | INFO     | pilot is running in a VM
[2026-01-31 21:11:03] 2026-01-31 20:10:06,762 | INFO     | architecture information:
[2026-01-31 21:11:03] 2026-01-31 20:10:06,762 | INFO     | executing command: cat /etc/os-release
[2026-01-31 21:11:03] 2026-01-31 20:10:06,784 | INFO     | cat /etc/os-release:
[2026-01-31 21:11:03] NAME="CentOS Linux"
[2026-01-31 21:11:03] VERSION="7 (Core)"
[2026-01-31 21:11:03] ID="centos"
[2026-01-31 21:11:03] ID_LIKE="rhel fedora"
[2026-01-31 21:11:03] VERSION_ID="7"
[2026-01-31 21:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 21:11:03] ANSI_COLOR="0;31"
[2026-01-31 21:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 21:11:03] HOME_URL="https://www.centos.org/"
[2026-01-31 21:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 21:11:03] 
[2026-01-31 21:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 21:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 21:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 21:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 21:11:03] 
[2026-01-31 21:11:03] 2026-01-31 20:10:06,784 | INFO     | **************************************
[2026-01-31 21:11:03] 2026-01-31 20:10:07,287 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-31 21:11:03] 2026-01-31 20:10:07,458 | INFO     | sufficient remaining disk space (494712913920 B)
[2026-01-31 21:11:03] 2026-01-31 20:10:07,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 21:11:03] 2026-01-31 20:10:07,458 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 21:11:03] 2026-01-31 20:10:07,459 | INFO     | update_server=False
[2026-01-31 21:11:03] 2026-01-31 20:10:07,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 21:11:03] 2026-01-31 20:10:07,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 21:11:03] 2026-01-31 20:10:07,800 | INFO     | all data control threads have been joined
[2026-01-31 21:11:03] 2026-01-31 20:10:07,919 | INFO     | all job control threads have been joined
[2026-01-31 21:11:03] 2026-01-31 20:10:08,083 | INFO     | all payload control threads have been joined
[2026-01-31 21:11:03] 2026-01-31 20:10:08,335 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 21:11:03] 2026-01-31 20:10:08,336 | INFO     | aborting loop
[2026-01-31 21:11:03] 2026-01-31 20:10:08,464 | INFO     | [job] retrieve thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:08,507 | INFO     | [payload] failed_post thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:08,756 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:08,806 | INFO     | [data] control thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:08,925 | INFO     | [job] control thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:08,997 | INFO     | [payload] validate_post thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,089 | INFO     | [payload] control thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,271 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 21:11:03] 2026-01-31 20:10:09,325 | INFO     | [data] copytool_in thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,341 | INFO     | [job] job monitor thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,466 | INFO     | [data] copytool_out thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,639 | INFO     | [job] validate thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,672 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 21:11:03] 2026-01-31 20:10:09,691 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:09,913 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:10,276 | INFO     | [job] queue monitor thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:13,690 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 21:11:03] 2026-01-31 20:10:36,692 | INFO     | PID=30396 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 21:11:03] 2026-01-31 20:10:36,692 | INFO     | .. there are 2 such processes running
[2026-01-31 21:11:03] 2026-01-31 20:10:36,692 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 21:11:03] 2026-01-31 20:10:36,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 21:11:03] 2026-01-31 20:10:36,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 21:11:03] 2026-01-31 20:10:53,726 | INFO     | [monitor] cgroup control has ended
[2026-01-31 21:11:03] 2026-01-31 20:10:54,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019264636736)>', '<ExcThread(monitor, started 140018618201856)>']
[2026-01-31 21:11:03] 2026-01-31 20:10:54,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 21:11:03] 2026-01-31 20:10:54,800 | INFO     | [monitor] control thread has ended
[2026-01-31 21:11:03] 2026-01-31 20:10:59,730 | INFO     | all workflow threads have been joined
[2026-01-31 21:11:03] 2026-01-31 20:10:59,730 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 21:11:03] 2026-01-31 20:10:59,731 | INFO     | traces error code: 0
[2026-01-31 21:11:03] 2026-01-31 20:10:59,731 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 21:11:03] 2026-01-31 20:11:00,125 [wrapper] ==== pilot stdout END ====
[2026-01-31 21:11:03] 2026-01-31 20:11:00,252 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 21:11:03] 2026-01-31 20:11:00,345 [wrapper] pilotpid: 30396
[2026-01-31 21:11:03] 2026-01-31 20:11:00,434 [wrapper] Pilot exit status: 0
[2026-01-31 21:11:03] 2026-01-31 20:11:00,848 [wrapper] pandaids: 6990489030
[2026-01-31 21:11:03] 2026-01-31 20:11:02,079 [wrapper] cleanup supervisor_pilot  8454 30397
[2026-01-31 21:11:03] 2026-01-31 20:11:02,220 [wrapper] Test setup, not cleaning
[2026-01-31 21:11:03] 2026-01-31 20:11:02,350 [wrapper] apfmon messages muted
[2026-01-31 21:11:03] 2026-01-31 20:11:02,435 [wrapper] ==== wrapper stdout END ====
[2026-01-31 21:11:03] 2026-01-31 20:11:02,445 [wrapper] ==== wrapper stderr END ====
[2026-01-31 21:11:03]  *** Error codes and diagnostics ***
[2026-01-31 21:11:03]     "exeErrorCode": 0,
[2026-01-31 21:11:03]     "exeErrorDiag": "",
[2026-01-31 21:11:03]     "pilotErrorCode": 0,
[2026-01-31 21:11:03]     "pilotErrorDiag": "",
[2026-01-31 21:11:03]  *** Listing of results directory ***
[2026-01-31 21:11:03] total 671296
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc    584422 Jan 31 02:06 pilot3.tar.gz
[2026-01-31 21:11:03] -rwx------. 1 boinc boinc     36322 Jan 31 02:07 runpilot2-wrapper.sh
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc      5111 Jan 31 02:08 queuedata.json
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc       100 Jan 31 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 21:11:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan 31 17:31 run_atlas
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc       105 Jan 31 17:31 job.xml
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc 502312165 Jan 31 17:31 EVNT.48310747._000008.pool.root.1
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc     15845 Jan 31 17:31 start_atlas.sh
[2026-01-31 21:11:03] drwxrwx--x. 2 boinc boinc        68 Jan 31 17:31 shared
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc    597755 Jan 31 17:31 input.tar.gz
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc      6390 Jan 31 17:31 init_data.xml
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc         0 Jan 31 17:31 boinc_lockfile
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc      2521 Jan 31 17:31 pandaJob.out
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc       413 Jan 31 17:37 workernode_map.json
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc   1010520 Jan 31 17:37 agis_schedconf.cvmfs.json
[2026-01-31 21:11:03] drwx------. 5 boinc boinc      4096 Jan 31 17:37 pilot3
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc 176622858 Jan 31 21:08 HITS.48310749._000386.pool.root.1
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc       531 Jan 31 21:09 boinc_task_state.xml
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc        95 Jan 31 21:09 pilot_heartbeat.json
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc      1016 Jan 31 21:09 memory_monitor_summary.json
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc   1511668 Jan 31 21:09 agis_ddmendpoints.agis.ALL.json
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc    469234 Jan 31 21:10 log.48310749._000386.job.log.tgz.1
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc      6316 Jan 31 21:10 heartbeat.json
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc      8192 Jan 31 21:10 boinc_mmap_file
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc        28 Jan 31 21:10 wrapper_checkpoint.txt
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc      4880 Jan 31 21:10 pilotlog.txt
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc   1802824 Jan 31 21:11 log.48310749._000386.job.log.1
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc       357 Jan 31 21:11 output.list
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc       620 Jan 31 21:11 runtime_log
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc   2293760 Jan 31 21:11 result.tar.gz
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc      8816 Jan 31 21:11 runtime_log.err
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc       654 Jan 31 21:11 GbKLDmZdE68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrbMKDmMNLcDn.diag
[2026-01-31 21:11:03] -rw-r--r--. 1 boinc boinc     20796 Jan 31 21:11 stderr.txt
[2026-01-31 21:11:03] HITS file was successfully produced:
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc 176622858 Jan 31 21:08 shared/HITS.pool.root.1
[2026-01-31 21:11:03]  *** Contents of shared directory: ***
[2026-01-31 21:11:03] total 665864
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc 502312165 Jan 31 17:31 ATLAS.root_0
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc     15845 Jan 31 17:31 start_atlas.sh
[2026-01-31 21:11:03] -rw-r--r--. 2 boinc boinc    597755 Jan 31 17:31 input.tar.gz
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc 176622858 Jan 31 21:08 HITS.pool.root.1
[2026-01-31 21:11:03] -rw-------. 1 boinc boinc   2293760 Jan 31 21:11 result.tar.gz
21:11:04 (26435): run_atlas exited; CPU time 47086.521698
21:11:04 (26435): called boinc_finish(0)

</stderr_txt>
]]>

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