Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:24:19 (1258748): wrapper (7.7.26015): starting
07:24:19 (1258748): wrapper: running run_atlas (--nthreads 4)
[2026-01-31 07:24:19] Arguments: --nthreads 4
[2026-01-31 07:24:19] Threads: 4
[2026-01-31 07:24:19] Checking for CVMFS
[2026-01-31 07:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 07:24:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 07:24:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 07:24:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 07:24:20] 2.13.1.0 4933 2505 73468 155704 2 50 9614024 10240000 1822 130560 0 3335023 99.994 89911 299 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-31 07:24:20] CVMFS is ok
[2026-01-31 07:24:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 07:24:20] Checking for apptainer binary...
[2026-01-31 07:24:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 07:24:20] Running /usr/bin/apptainer --version
[2026-01-31 07:24:20] apptainer version 1.4.5
[2026-01-31 07:24:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 07:24:20] woolyvlneu
[2026-01-31 07:24:20] apptainer works
[2026-01-31 07:24:20] Set ATHENA_PROC_NUMBER=4
[2026-01-31 07:24:20] Set ATHENA_CORE_NUMBER=4
[2026-01-31 07:24:20] Starting ATLAS job with PandaID=6990473643
[2026-01-31 07:24:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 08:41:09]  *** The last 200 lines of the pilot log: ***
[2026-01-31 08:41:09]  lfn=log.48310724._011071.job.log.tgz.1
[2026-01-31 08:41:09]  mtime=0
[2026-01-31 08:41:09]  protocol_id=None
[2026-01-31 08:41:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-31 08:41:09]  replicas=None
[2026-01-31 08:41:09]  scope=mc23_13p6TeV
[2026-01-31 08:41:09]  status=None
[2026-01-31 08:41:09]  status_code=0
[2026-01-31 08:41:09]  storage_token=
[2026-01-31 08:41:09]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6990473643/log.48310724._011071.job.log.tgz.1
[2026-01-31 08:41:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/7b/log.48310724._011071.job.log.tgz.1
[2026-01-31 08:41:09]  workdir=None
[2026-01-31 08:41:09] ]
[2026-01-31 08:41:09] 2026-01-31 07:40:32,540 | INFO     | transferring file log.48310724._011071.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6990473643/log.48310724._011071.job.log.tgz.1 to /var/li
[2026-01-31 08:41:09] 2026-01-31 07:40:32,540 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6990473643/log.48310724._011071.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-01-31 08:41:09] 2026-01-31 07:40:32,558 | INFO     | adding to output.list: log.48310724._011071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/7b/log.48310724._011071.job.log.tg
[2026-01-31 08:41:09] 2026-01-31 07:40:32,559 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-31 08:41:09] 2026-01-31 07:40:32,559 | INFO     | summary of transferred files:
[2026-01-31 08:41:09] 2026-01-31 07:40:32,559 | INFO     |  -- lfn=log.48310724._011071.job.log.tgz.1, status_code=0, status=transferred
[2026-01-31 08:41:09] 2026-01-31 07:40:32,559 | INFO     | stage-out finished correctly
[2026-01-31 08:41:09] 2026-01-31 07:40:33,024 | INFO     | monitor loop #349: job 0:6990473643 is in state 'finished'
[2026-01-31 08:41:09] 2026-01-31 07:40:33,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-31 08:41:09] 2026-01-31 07:40:33,892 | INFO     | time since job start (4559s) is within the limit (349056.0s)
[2026-01-31 08:41:09] 2026-01-31 07:40:35,170 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-31 08:41:09] 2026-01-31 07:40:35,528 | INFO     | monitor loop #350: job 0:6990473643 is in state 'finished'
[2026-01-31 08:41:09] 2026-01-31 07:40:35,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-31 08:41:09] 2026-01-31 07:40:35,898 | INFO     | time since job start (4561s) is within the limit (349056.0s)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,183 | INFO     | job 6990473643 has state=finished
[2026-01-31 08:41:09] 2026-01-31 07:40:36,184 | INFO     | preparing for final server update for job 6990473643 in state='finished'
[2026-01-31 08:41:09] 2026-01-31 07:40:36,184 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6990473643/jobReport.json
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | this job has now completed (state=finished)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | log transfer has been attempted: DONE
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | job 6990473643 has finished - writing final server update
[2026-01-31 08:41:09] 2026-01-31 07:40:36,185 | INFO     | total number of processed events: 400 (read)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6990473643/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | INFO     | extracted standard info from prmon json
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 08:41:09] 2026-01-31 07:40:36,187 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | fitting pss+swap vs Time
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | sum of square deviations: 97479037.0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | sum of deviations: -6626582561.000001
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | mean x: 1769843043.5
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | mean y: 2584958.529411765
[2026-01-31 08:41:09] 2026-01-31 07:40:36,188 | INFO     | intersect: 120315745702.6622
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | chi2: 0.03764233887721546
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | current memory leak: -67.98 B/s (using 68 data points, chi2=0.04)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | ..............................
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . Timing measurements:
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . get job = 0 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . initial setup = 5 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . payload setup = 5 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . stage-in = 0 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . payload execution = 4536 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . stage-out = 0 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | . log creation = 0 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,189 | INFO     | ..............................
[2026-01-31 08:41:09] 2026-01-31 07:40:36,220 | INFO     | 
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | job summary report
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | --------------------------------------------------
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | PanDA job id: 6990473643
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | task id: 48310724
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | errors: (none)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | pilot state: finished 
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | transexitcode: 0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | exeerrorcode: 0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | exeerrordiag: 
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | exitcode: 0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | exitmsg: OK
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | cpuconsumptiontime: 17181 s
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | nevents: 400
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | neventsw: 0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | pid: 1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | pgrp: 1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | corecount: 4
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | event service: False
[2026-01-31 08:41:09] 2026-01-31 07:40:36,221 | INFO     | sizes: {0: 2278252, 11: 2278252, 4545: 2304473, 4547: 2313499, 4549: 2313555, 4550: 2313749}
[2026-01-31 08:41:09] 2026-01-31 07:40:36,222 | INFO     | --------------------------------------------------
[2026-01-31 08:41:09] 2026-01-31 07:40:36,222 | INFO     | 
[2026-01-31 08:41:09] 2026-01-31 07:40:36,222 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,240 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | job 6990473643 has completed (purged errors)
[2026-01-31 08:41:09] 2026-01-31 07:40:36,241 | INFO     | overall cleanup function is called
[2026-01-31 08:41:09] 2026-01-31 07:40:37,248 | INFO     | --- collectZombieJob: --- 10, [1267368]
[2026-01-31 08:41:09] 2026-01-31 07:40:37,249 | INFO     | zombie collector waiting for pid 1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:37,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 08:41:09] 2026-01-31 07:40:37,249 | INFO     | collected zombie processes
[2026-01-31 08:41:09] 2026-01-31 07:40:37,249 | INFO     | will attempt to kill all subprocesses of pid=1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:37,347 | INFO     | process IDs to be killed: [1267368] (in reverse order)
[2026-01-31 08:41:09] 2026-01-31 07:40:37,394 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 08:41:09] 2026-01-31 07:40:37,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 08:41:09] 2026-01-31 07:40:37,396 | INFO     | did not find any defunct processes belonging to 1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:37,398 | INFO     | did not find any defunct processes belonging to 1267368
[2026-01-31 08:41:09] 2026-01-31 07:40:37,398 | INFO     | ready for new job
[2026-01-31 08:41:09] 2026-01-31 07:40:37,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 08:41:09] 2026-01-31 07:40:37,399 | INFO     | **************************************
[2026-01-31 08:41:09] 2026-01-31 07:40:37,400 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 08:41:09] 2026-01-31 07:40:37,400 | INFO     | **************************************
[2026-01-31 08:41:09] 2026-01-31 07:40:37,400 | INFO     | 
[2026-01-31 08:41:09] 2026-01-31 07:40:37,400 | INFO     | pilot is running in a VM
[2026-01-31 08:41:09] 2026-01-31 07:40:37,400 | INFO     | architecture information:
[2026-01-31 08:41:09] 2026-01-31 07:40:37,401 | INFO     | executing command: cat /etc/os-release
[2026-01-31 08:41:09] 2026-01-31 07:40:37,413 | INFO     | cat /etc/os-release:
[2026-01-31 08:41:09] NAME="CentOS Linux"
[2026-01-31 08:41:09] VERSION="7 (Core)"
[2026-01-31 08:41:09] ID="centos"
[2026-01-31 08:41:09] ID_LIKE="rhel fedora"
[2026-01-31 08:41:09] VERSION_ID="7"
[2026-01-31 08:41:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 08:41:09] ANSI_COLOR="0;31"
[2026-01-31 08:41:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 08:41:09] HOME_URL="https://www.centos.org/"
[2026-01-31 08:41:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 08:41:09] 
[2026-01-31 08:41:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 08:41:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 08:41:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 08:41:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 08:41:09] 
[2026-01-31 08:41:09] 2026-01-31 07:40:37,414 | INFO     | **************************************
[2026-01-31 08:41:09] 2026-01-31 07:40:37,917 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | INFO     | sufficient remaining disk space (39553335296 B)
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | INFO     | update_server=False
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 08:41:09] 2026-01-31 07:40:37,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 08:41:09] 2026-01-31 07:40:38,032 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 08:41:09] 2026-01-31 07:40:38,033 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 08:41:09] 2026-01-31 07:40:38,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 08:41:09] 2026-01-31 07:40:38,033 | INFO     | will abort loop
[2026-01-31 08:41:09] 2026-01-31 07:40:38,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 08:41:09] 2026-01-31 07:40:38,129 | INFO     | all data control threads have been joined
[2026-01-31 08:41:09] 2026-01-31 07:40:38,238 | INFO     | all payload control threads have been joined
[2026-01-31 08:41:09] 2026-01-31 07:40:38,931 | INFO     | [job] retrieve thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:38,935 | INFO     | [job] queue monitor thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,038 | INFO     | [job] job monitor thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,134 | INFO     | [data] control thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,238 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,244 | INFO     | [payload] control thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,361 | INFO     | [monitor] cgroup control has ended
[2026-01-31 08:41:09] 2026-01-31 07:40:39,393 | INFO     | all job control threads have been joined
[2026-01-31 08:41:09] 2026-01-31 07:40:39,519 | INFO     | [job] validate thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,638 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,735 | INFO     | [data] copytool_in thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:39,786 | INFO     | [payload] validate_post thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:40,105 | INFO     | [data] copytool_out thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:40,267 | INFO     | [payload] failed_post thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:40,399 | INFO     | [job] control thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:41,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 08:41:09] 2026-01-31 07:40:45,222 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:48,634 | INFO     | job.realtimelogging is not enabled
[2026-01-31 08:41:09] 2026-01-31 07:40:49,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 08:41:09] 2026-01-31 07:40:51,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132359741794112)>', '<ExcThread(monitor, started 132358636283648)>']
[2026-01-31 08:41:09] 2026-01-31 07:40:56,206 | INFO     | all workflow threads have been joined
[2026-01-31 08:41:09] 2026-01-31 07:40:56,206 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 08:41:09] 2026-01-31 07:40:56,207 | INFO     | traces error code: 0
[2026-01-31 08:41:09] 2026-01-31 07:40:56,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 08:41:09] 2026-01-31 07:41:09,084 | INFO     | PID=1262840 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | INFO     | .. there are 3 such processes running
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 08:41:09] 2026-01-31 07:41:09,085 | INFO     | [monitor] control thread has ended
[2026-01-31 08:41:09] 2026-01-31 07:41:09,147 [wrapper] ==== pilot stdout END ====
[2026-01-31 08:41:09] 2026-01-31 07:41:09,150 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 08:41:09] 2026-01-31 07:41:09,154 [wrapper] pilotpid: 1262840
[2026-01-31 08:41:09] 2026-01-31 07:41:09,157 [wrapper] Pilot exit status: 0
[2026-01-31 08:41:09] 2026-01-31 07:41:09,169 [wrapper] pandaids: 6990473643
[2026-01-31 08:41:09] 2026-01-31 07:41:09,201 [wrapper] cleanup supervisor_pilot 1292120 1262841
[2026-01-31 08:41:09] 2026-01-31 07:41:09,205 [wrapper] Test setup, not cleaning
[2026-01-31 08:41:09] 2026-01-31 07:41:09,208 [wrapper] apfmon messages muted
[2026-01-31 08:41:09] 2026-01-31 07:41:09,211 [wrapper] ==== wrapper stdout END ====
[2026-01-31 08:41:09] 2026-01-31 07:41:09,215 [wrapper] ==== wrapper stderr END ====
[2026-01-31 08:41:09]  *** Error codes and diagnostics ***
[2026-01-31 08:41:09]     "exeErrorCode": 0,
[2026-01-31 08:41:09]     "exeErrorDiag": "",
[2026-01-31 08:41:09]     "pilotErrorCode": 0,
[2026-01-31 08:41:09]     "pilotErrorDiag": "",
[2026-01-31 08:41:09]  *** Listing of results directory ***
[2026-01-31 08:41:09] insgesamt 669504
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc    584422 Jan 31 02:06 pilot3.tar.gz
[2026-01-31 08:41:09] -rwx------ 1 yeti boinc     36322 Jan 31 02:07 runpilot2-wrapper.sh
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc      5111 Jan 31 02:08 queuedata.json
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc       100 Jan 31 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 08:41:09] -rwxr-xr-x 1 yeti boinc      7986 Jan 31 07:24 run_atlas
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc       105 Jan 31 07:24 job.xml
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc     15845 Jan 31 07:24 start_atlas.sh
[2026-01-31 08:41:09] drwxrwx--x 2 yeti boinc      4096 Jan 31 07:24 shared
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc    597778 Jan 31 07:24 input.tar.gz
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc      6561 Jan 31 07:24 init_data.xml
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc 498940391 Jan 31 07:24 EVNT.48310721._000202.pool.root.1
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc         0 Jan 31 07:24 boinc_setup_complete
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc         0 Jan 31 07:24 boinc_lockfile
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc      2537 Jan 31 07:24 pandaJob.out
[2026-01-31 08:41:09] -rw------- 1 yeti boinc        52 Jan 31 07:24 setup.sh.local
[2026-01-31 08:41:09] -rw------- 1 yeti boinc   1010528 Jan 31 07:24 agis_schedconf.cvmfs.json
[2026-01-31 08:41:09] -rw------- 1 yeti boinc   1511668 Jan 31 07:24 agis_ddmendpoints.agis.ALL.json
[2026-01-31 08:41:09] -rw------- 1 yeti boinc       422 Jan 31 07:24 workernode_map.json
[2026-01-31 08:41:09] drwx------ 5 yeti boinc      4096 Jan 31 07:24 pilot3
[2026-01-31 08:41:09] -rw------- 1 yeti boinc        95 Jan 31 08:40 pilot_heartbeat.json
[2026-01-31 08:41:09] -rw------- 1 yeti boinc 180756823 Jan 31 08:40 HITS.48310724._011071.pool.root.1
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc       530 Jan 31 08:40 boinc_task_state.xml
[2026-01-31 08:41:09] -rw------- 1 yeti boinc      1023 Jan 31 08:40 memory_monitor_summary.json
[2026-01-31 08:41:09] -rw------- 1 yeti boinc    277799 Jan 31 08:40 log.48310724._011071.job.log.tgz.1
[2026-01-31 08:41:09] -rw------- 1 yeti boinc      6285 Jan 31 08:40 heartbeat.json
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc        27 Jan 31 08:41 wrapper_checkpoint.txt
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc      8192 Jan 31 08:41 boinc_mmap_file
[2026-01-31 08:41:09] -rw------- 1 yeti boinc       822 Jan 31 08:41 pilotlog.txt
[2026-01-31 08:41:09] -rw------- 1 yeti boinc    690625 Jan 31 08:41 log.48310724._011071.job.log.1
[2026-01-31 08:41:09] -rw------- 1 yeti boinc       357 Jan 31 08:41 output.list
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc       620 Jan 31 08:41 runtime_log
[2026-01-31 08:41:09] -rw------- 1 yeti boinc    983040 Jan 31 08:41 result.tar.gz
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc      9551 Jan 31 08:41 runtime_log.err
[2026-01-31 08:41:09] -rw------- 1 yeti boinc       639 Jan 31 08:41 1cOMDmKdE68n9Rq4apOajLDm4fhM0noT9bVooX4SDmHIMKDmsS4G3n.diag
[2026-01-31 08:41:09] -rw-r--r-- 1 yeti boinc     21356 Jan 31 08:41 stderr.txt
[2026-01-31 08:41:09] HITS file was successfully produced:
[2026-01-31 08:41:09] -rw------- 1 yeti boinc 180756823 Jan 31 08:40 shared/HITS.pool.root.1
[2026-01-31 08:41:09]  *** Contents of shared directory: ***
[2026-01-31 08:41:09] insgesamt 665340
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc     15845 Jan 31 07:24 start_atlas.sh
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc    597778 Jan 31 07:24 input.tar.gz
[2026-01-31 08:41:09] -rw-r--r-- 2 yeti boinc 498940391 Jan 31 07:24 ATLAS.root_0
[2026-01-31 08:41:09] -rw------- 1 yeti boinc 180756823 Jan 31 08:40 HITS.pool.root.1
[2026-01-31 08:41:09] -rw------- 1 yeti boinc    983040 Jan 31 08:41 result.tar.gz
08:41:10 (1258748): run_atlas exited; CPU time 17230.156535
08:41:10 (1258748): called boinc_finish(0)

</stderr_txt>
]]>

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