Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:24:35 (1382138): wrapper (7.7.26015): starting
11:24:35 (1382138): wrapper: running run_atlas (--nthreads 4)
[2026-01-31 11:24:35] Arguments: --nthreads 4
[2026-01-31 11:24:35] Threads: 4
[2026-01-31 11:24:35] Checking for CVMFS
[2026-01-31 11:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 11:24:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 11:24:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 11:24:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 11:24:35] 2.13.1.0 4933 2745 73620 155710 3 50 9637970 10240000 1822 130560 0 3654339 99.994 99052 297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-01-31 11:24:35] CVMFS is ok
[2026-01-31 11:24:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 11:24:35] Checking for apptainer binary...
[2026-01-31 11:24:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 11:24:35] Running /usr/bin/apptainer --version
[2026-01-31 11:24:35] apptainer version 1.4.5
[2026-01-31 11:24:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 11:24:35] woolyvlneu
[2026-01-31 11:24:35] apptainer works
[2026-01-31 11:24:35] Set ATHENA_PROC_NUMBER=4
[2026-01-31 11:24:35] Set ATHENA_CORE_NUMBER=4
[2026-01-31 11:24:35] Starting ATLAS job with PandaID=6994405097
[2026-01-31 11:24:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 13:12:02]  *** The last 200 lines of the pilot log: ***
[2026-01-31 13:12:02] 2026-01-31 12:10:55,032 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6994405097/jobReport.json
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | this job has now completed (state=finished)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | log transfer has been attempted: DONE
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | job 6994405097 has finished - writing final server update
[2026-01-31 13:12:02] 2026-01-31 12:10:55,033 | INFO     | total number of processed events: 400 (read)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,035 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-6994405097/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,035 | INFO     | extracted standard info from prmon json
[2026-01-31 13:12:02] 2026-01-31 12:10:55,035 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 13:12:02] 2026-01-31 12:10:55,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 13:12:02] 2026-01-31 12:10:55,035 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 13:12:02] 2026-01-31 12:10:55,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 13:12:02] 2026-01-31 12:10:55,036 | INFO     | fitting pss+swap vs Time
[2026-01-31 13:12:02] 2026-01-31 12:10:55,036 | INFO     | sum of square deviations: 348769330.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | sum of deviations: -11636961460.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | mean x: 1769858252.5
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | mean y: 2460725.1923076925
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | intersect: 59055165485.68672
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | chi2: 1.8466274638984719
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | sum of square deviations: 300842850.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | sum of deviations: -10227789052.999996
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | mean x: 1769858100.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | mean y: 2465212.4242424243
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | intersect: 60172535069.63831
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | chi2: 1.8447876869153614
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | current chi2=1.8447876869153614 (change=0.09962902746103602 %)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | right removable region: 98
[2026-01-31 13:12:02] 2026-01-31 12:10:55,037 | INFO     | sum of square deviations: 300842850.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | sum of deviations: -26981180169.000023
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean x: 1769858405.0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean y: 2508333.9292929294
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | intersect: 158732783954.3205
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | chi2: 0.1547470242364884
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | current chi2=0.1547470242364884 (change=91.62001934543976 %)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | sum of square deviations: 257521107.5
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | sum of deviations: -23515072054.499996
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean x: 1769858557.5
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean y: 2496102.287234043
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | intersect: 161613914715.36508
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | chi2: 0.1542682387969486
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | current chi2=0.1542682387969486 (change=0.30939880227235295 %)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | left removable region: 20
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | sum of square deviations: 147126479.5
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | sum of deviations: -14340233769.500002
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean x: 1769858679.5
[2026-01-31 13:12:02] 2026-01-31 12:10:55,038 | INFO     | mean y: 2471091.5256410255
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | intersect: 172508380899.61414
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | chi2: 0.13418660899459994
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | current memory leak: -97.47 B/s (using 78 data points, chi2=0.13)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | could have reported an average CPU frequency of 3700 MHz (7 samples)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | ..............................
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . Timing measurements:
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . get job = 0 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . initial setup = 5 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . payload setup = 6 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . stage-in = 0 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . payload execution = 6338 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . stage-out = 0 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | . log creation = 0 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,039 | INFO     | ..............................
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | 
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | job summary report
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | --------------------------------------------------
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | PanDA job id: 6994405097
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | task id: 48431080
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | errors: (none)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,070 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | pilot state: finished 
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | transexitcode: 0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | exeerrorcode: 0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | exeerrordiag: 
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | exitcode: 0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | exitmsg: OK
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | cpuconsumptiontime: 24310 s
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | nevents: 400
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | neventsw: 0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | pid: 1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | pgrp: 1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | corecount: 4
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | event service: False
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | sizes: {0: 2278328, 11: 2278328, 6348: 2314487, 6352: 2314487, 6354: 2314681}
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | --------------------------------------------------
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | 
[2026-01-31 13:12:02] 2026-01-31 12:10:55,071 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 13:12:02] 2026-01-31 12:10:55,090 | INFO     | job 6994405097 has completed (purged errors)
[2026-01-31 13:12:02] 2026-01-31 12:10:55,091 | INFO     | overall cleanup function is called
[2026-01-31 13:12:02] 2026-01-31 12:10:56,098 | INFO     | --- collectZombieJob: --- 10, [1390662]
[2026-01-31 13:12:02] 2026-01-31 12:10:56,098 | INFO     | zombie collector waiting for pid 1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:56,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 13:12:02] 2026-01-31 12:10:56,098 | INFO     | collected zombie processes
[2026-01-31 13:12:02] 2026-01-31 12:10:56,098 | INFO     | will attempt to kill all subprocesses of pid=1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:56,190 | INFO     | process IDs to be killed: [1390662] (in reverse order)
[2026-01-31 13:12:02] 2026-01-31 12:10:56,235 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 13:12:02] 2026-01-31 12:10:56,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 13:12:02] 2026-01-31 12:10:56,238 | INFO     | did not find any defunct processes belonging to 1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:56,240 | INFO     | did not find any defunct processes belonging to 1390662
[2026-01-31 13:12:02] 2026-01-31 12:10:56,240 | INFO     | ready for new job
[2026-01-31 13:12:02] 2026-01-31 12:10:56,240 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 13:12:02] 2026-01-31 12:10:56,241 | INFO     | **************************************
[2026-01-31 13:12:02] 2026-01-31 12:10:56,241 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 13:12:02] 2026-01-31 12:10:56,241 | INFO     | **************************************
[2026-01-31 13:12:02] 2026-01-31 12:10:56,241 | INFO     | 
[2026-01-31 13:12:02] 2026-01-31 12:10:56,242 | INFO     | pilot is running in a VM
[2026-01-31 13:12:02] 2026-01-31 12:10:56,242 | INFO     | architecture information:
[2026-01-31 13:12:02] 2026-01-31 12:10:56,242 | INFO     | executing command: cat /etc/os-release
[2026-01-31 13:12:02] 2026-01-31 12:10:56,253 | INFO     | cat /etc/os-release:
[2026-01-31 13:12:02] NAME="CentOS Linux"
[2026-01-31 13:12:02] VERSION="7 (Core)"
[2026-01-31 13:12:02] ID="centos"
[2026-01-31 13:12:02] ID_LIKE="rhel fedora"
[2026-01-31 13:12:02] VERSION_ID="7"
[2026-01-31 13:12:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 13:12:02] ANSI_COLOR="0;31"
[2026-01-31 13:12:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 13:12:02] HOME_URL="https://www.centos.org/"
[2026-01-31 13:12:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 13:12:02] 
[2026-01-31 13:12:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 13:12:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 13:12:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 13:12:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 13:12:02] 
[2026-01-31 13:12:02] 2026-01-31 12:10:56,254 | INFO     | **************************************
[2026-01-31 13:12:02] 2026-01-31 12:10:56,757 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | INFO     | sufficient remaining disk space (38718668800 B)
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | INFO     | update_server=False
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 13:12:02] 2026-01-31 12:10:56,769 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 13:12:02] 2026-01-31 12:10:56,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 13:12:02] 2026-01-31 12:10:57,053 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 13:12:02] 2026-01-31 12:10:57,054 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 13:12:02] 2026-01-31 12:10:57,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 13:12:02] 2026-01-31 12:10:57,054 | INFO     | will abort loop
[2026-01-31 13:12:02] 2026-01-31 12:10:57,190 | INFO     | all data control threads have been joined
[2026-01-31 13:12:02] 2026-01-31 12:10:57,288 | INFO     | all payload control threads have been joined
[2026-01-31 13:12:02] 2026-01-31 12:10:57,775 | INFO     | [job] retrieve thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:57,775 | INFO     | [job] queue monitor thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,059 | INFO     | [job] job monitor thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,196 | INFO     | [data] control thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,294 | INFO     | [payload] control thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,318 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 13:12:02] 2026-01-31 12:10:58,372 | INFO     | all job control threads have been joined
[2026-01-31 13:12:02] 2026-01-31 12:10:58,401 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,604 | INFO     | [payload] failed_post thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,738 | INFO     | [job] validate thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,789 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,802 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:58,971 | INFO     | [data] copytool_out thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:59,008 | INFO     | [data] copytool_in thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:59,149 | INFO     | [payload] validate_post thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:10:59,377 | INFO     | [job] control thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:11:02,324 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:11:07,651 | INFO     | job.realtimelogging is not enabled
[2026-01-31 13:12:02] 2026-01-31 12:11:08,656 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 13:12:02] 2026-01-31 12:11:26,965 | INFO     | PID=1386135 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 13:12:02] 2026-01-31 12:11:26,965 | INFO     | .. there are 3 such processes running
[2026-01-31 13:12:02] 2026-01-31 12:11:26,965 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 13:12:02] 2026-01-31 12:11:26,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 13:12:02] 2026-01-31 12:11:26,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 13:12:02] 2026-01-31 12:11:56,579 | INFO     | [monitor] cgroup control has ended
[2026-01-31 13:12:02] 2026-01-31 12:11:57,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128918697756480)>', '<ExcThread(monitor, started 128917914502912)>']
[2026-01-31 13:12:02] 2026-01-31 12:11:58,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 13:12:02] 2026-01-31 12:11:58,126 | INFO     | [monitor] control thread has ended
[2026-01-31 13:12:02] 2026-01-31 12:12:02,499 | INFO     | all workflow threads have been joined
[2026-01-31 13:12:02] 2026-01-31 12:12:02,499 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 13:12:02] 2026-01-31 12:12:02,499 | INFO     | traces error code: 0
[2026-01-31 13:12:02] 2026-01-31 12:12:02,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 13:12:02] 2026-01-31 12:12:02,570 [wrapper] ==== pilot stdout END ====
[2026-01-31 13:12:02] 2026-01-31 12:12:02,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 13:12:02] 2026-01-31 12:12:02,577 [wrapper] pilotpid: 1386135
[2026-01-31 13:12:02] 2026-01-31 12:12:02,580 [wrapper] Pilot exit status: 0
[2026-01-31 13:12:02] 2026-01-31 12:12:02,596 [wrapper] pandaids: 6994405097
[2026-01-31 13:12:02] 2026-01-31 12:12:02,635 [wrapper] cleanup supervisor_pilot 1429784 1386136
[2026-01-31 13:12:02] 2026-01-31 12:12:02,638 [wrapper] Test setup, not cleaning
[2026-01-31 13:12:02] 2026-01-31 12:12:02,642 [wrapper] apfmon messages muted
[2026-01-31 13:12:02] 2026-01-31 12:12:02,645 [wrapper] ==== wrapper stdout END ====
[2026-01-31 13:12:02] 2026-01-31 12:12:02,649 [wrapper] ==== wrapper stderr END ====
[2026-01-31 13:12:02]  *** Error codes and diagnostics ***
[2026-01-31 13:12:02]     "exeErrorCode": 0,
[2026-01-31 13:12:02]     "exeErrorDiag": "",
[2026-01-31 13:12:02]     "pilotErrorCode": 0,
[2026-01-31 13:12:02]     "pilotErrorDiag": "",
[2026-01-31 13:12:02]  *** Listing of results directory ***
[2026-01-31 13:12:02] insgesamt 892516
[2026-01-31 13:12:02] -rwx------ 1 yeti boinc     36322 Jan 31 05:32 runpilot2-wrapper.sh
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc      5111 Jan 31 05:35 queuedata.json
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc    584422 Jan 31 05:35 pilot3.tar.gz
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc       100 Jan 31 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 13:12:02] -rwxr-xr-x 1 yeti boinc      7986 Jan 31 11:24 run_atlas
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc       105 Jan 31 11:24 job.xml
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc 648760637 Jan 31 11:24 EVNT.48431078._000049.pool.root.1
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc     15845 Jan 31 11:24 start_atlas.sh
[2026-01-31 13:12:02] drwxrwx--x 2 yeti boinc      4096 Jan 31 11:24 shared
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc    597776 Jan 31 11:24 input.tar.gz
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc      6561 Jan 31 11:24 init_data.xml
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc         0 Jan 31 11:24 boinc_setup_complete
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc         0 Jan 31 11:24 boinc_lockfile
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc      2557 Jan 31 11:24 pandaJob.out
[2026-01-31 13:12:02] -rw------- 1 yeti boinc        52 Jan 31 11:24 setup.sh.local
[2026-01-31 13:12:02] -rw------- 1 yeti boinc   1010520 Jan 31 11:24 agis_schedconf.cvmfs.json
[2026-01-31 13:12:02] -rw------- 1 yeti boinc   1511668 Jan 31 11:24 agis_ddmendpoints.agis.ALL.json
[2026-01-31 13:12:02] -rw------- 1 yeti boinc       422 Jan 31 11:24 workernode_map.json
[2026-01-31 13:12:02] drwx------ 5 yeti boinc      4096 Jan 31 11:24 pilot3
[2026-01-31 13:12:02] -rw------- 1 yeti boinc 258707491 Jan 31 13:10 HITS.48431080._002506.pool.root.1
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc       530 Jan 31 13:10 boinc_task_state.xml
[2026-01-31 13:12:02] -rw------- 1 yeti boinc        95 Jan 31 13:10 pilot_heartbeat.json
[2026-01-31 13:12:02] -rw------- 1 yeti boinc      1023 Jan 31 13:10 memory_monitor_summary.json
[2026-01-31 13:12:02] -rw------- 1 yeti boinc    313223 Jan 31 13:10 log.48431080._002506.job.log.tgz.1
[2026-01-31 13:12:02] -rw------- 1 yeti boinc      6288 Jan 31 13:10 heartbeat.json
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc        27 Jan 31 13:12 wrapper_checkpoint.txt
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc      8192 Jan 31 13:12 boinc_mmap_file
[2026-01-31 13:12:02] -rw------- 1 yeti boinc      5153 Jan 31 13:12 pilotlog.txt
[2026-01-31 13:12:02] -rw------- 1 yeti boinc    944215 Jan 31 13:12 log.48431080._002506.job.log.1
[2026-01-31 13:12:02] -rw------- 1 yeti boinc       357 Jan 31 13:12 output.list
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc       620 Jan 31 13:12 runtime_log
[2026-01-31 13:12:02] -rw------- 1 yeti boinc   1280000 Jan 31 13:12 result.tar.gz
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc      9551 Jan 31 13:12 runtime_log.err
[2026-01-31 13:12:02] -rw------- 1 yeti boinc       640 Jan 31 13:12 11NKDmhpH68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmv3MKDmFMSAHn.diag
[2026-01-31 13:12:02] -rw-r--r-- 1 yeti boinc     20937 Jan 31 13:12 stderr.txt
[2026-01-31 13:12:02] HITS file was successfully produced:
[2026-01-31 13:12:02] -rw------- 1 yeti boinc 258707491 Jan 31 13:10 shared/HITS.pool.root.1
[2026-01-31 13:12:02]  *** Contents of shared directory: ***
[2026-01-31 13:12:02] insgesamt 888064
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc 648760637 Jan 31 11:24 ATLAS.root_0
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc     15845 Jan 31 11:24 start_atlas.sh
[2026-01-31 13:12:02] -rw-r--r-- 2 yeti boinc    597776 Jan 31 11:24 input.tar.gz
[2026-01-31 13:12:02] -rw------- 1 yeti boinc 258707491 Jan 31 13:10 HITS.pool.root.1
[2026-01-31 13:12:02] -rw------- 1 yeti boinc   1280000 Jan 31 13:12 result.tar.gz
13:12:04 (1382138): run_atlas exited; CPU time 24380.765355
13:12:04 (1382138): called boinc_finish(0)

</stderr_txt>
]]>

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