Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:25:30 (693112): wrapper (7.7.26015): starting
12:25:30 (693112): wrapper: running run_atlas (--nthreads 6)
[2026-02-01 12:25:30] Arguments: --nthreads 6
[2026-02-01 12:25:30] Threads: 6
[2026-02-01 12:25:30] Checking for CVMFS
[2026-02-01 12:25:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 12:25:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 12:25:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 12:25:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 12:25:34] 2.13.3.0 636943 542 62364 155736 3 49 41291518 52428800 0 130560 0 183773 99.980 19268 166 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-01 12:25:34] CVMFS is ok
[2026-02-01 12:25:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 12:25:34] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-01 12:25:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-01 12:25:34] Further information can be found at the LHC@home message board.
[2026-02-01 12:25:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 12:25:34] Checking for apptainer binary...
[2026-02-01 12:25:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 12:25:34] Running /usr/bin/apptainer --version
[2026-02-01 12:25:34] apptainer version 1.4.5-2.el9
[2026-02-01 12:25:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 12:25:34] Atto003
[2026-02-01 12:25:34] apptainer works
[2026-02-01 12:25:34] Set ATHENA_PROC_NUMBER=6
[2026-02-01 12:25:34] Set ATHENA_CORE_NUMBER=6
[2026-02-01 12:25:34] Starting ATLAS job with PandaID=6994404355
[2026-02-01 12:25:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 14:42:18]  *** The last 200 lines of the pilot log: ***
[2026-02-01 14:42:18] 2026-02-01 05:41:22,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,387 | INFO     | job 6994404355 has state=finished
[2026-02-01 14:42:18] 2026-02-01 05:41:22,387 | INFO     | preparing for final server update for job 6994404355 in state='finished'
[2026-02-01 14:42:18] 2026-02-01 05:41:22,387 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-6994404355/jobReport.json
[2026-02-01 14:42:18] 2026-02-01 05:41:22,389 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-02-01 14:42:18] 2026-02-01 05:41:22,389 | INFO     | this job has now completed (state=finished)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,389 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,389 | INFO     | log transfer has been attempted: DONE
[2026-02-01 14:42:18] 2026-02-01 05:41:22,389 | INFO     | job 6994404355 has finished - writing final server update
[2026-02-01 14:42:18] 2026-02-01 05:41:22,390 | INFO     | total number of processed events: 400 (read)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,392 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6994404355/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,393 | INFO     | extracted standard info from prmon json
[2026-02-01 14:42:18] 2026-02-01 05:41:22,393 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 14:42:18] 2026-02-01 05:41:22,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 14:42:18] 2026-02-01 05:41:22,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 14:42:18] 2026-02-01 05:41:22,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 14:42:18] 2026-02-01 05:41:22,395 | INFO     | fitting pss+swap vs Time
[2026-02-01 14:42:18] 2026-02-01 05:41:22,395 | INFO     | sum of square deviations: 729472282.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,395 | INFO     | sum of deviations: -21823690437.000004
[2026-02-01 14:42:18] 2026-02-01 05:41:22,396 | INFO     | mean x: 1769920406.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,396 | INFO     | mean y: 2632289.827067669
[2026-02-01 14:42:18] 2026-02-01 05:41:22,396 | INFO     | intersect: 52953506492.711945
[2026-02-01 14:42:18] 2026-02-01 05:41:22,396 | INFO     | chi2: 1.947343424730304
[2026-02-01 14:42:18] 2026-02-01 05:41:22,396 | INFO     | sum of square deviations: 650252192.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | sum of deviations: -19745102779.5
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | mean x: 1769920253.5
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | mean y: 2636293.0234375
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | intersect: 53746795477.45906
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | chi2: 1.9456685483905234
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | current chi2=1.9456685483905234 (change=0.08600826739190373 %)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | right removable region: 127
[2026-02-01 14:42:18] 2026-02-01 05:41:22,397 | INFO     | sum of square deviations: 650252192.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | sum of deviations: -44484221269.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | mean x: 1769920558.5
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | mean y: 2675188.875
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | intersect: 121084216660.81218
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | chi2: 0.22618295758817739
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | current chi2=0.22618295758817739 (change=88.38505038629731 %)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,398 | INFO     | sum of square deviations: 576985702.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | sum of deviations: -41551137041.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | mean x: 1769920711.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | mean y: 2669007.6178861787
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | intersect: 127462011170.7711
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | chi2: 0.21253720503566076
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | current chi2=0.21253720503566076 (change=6.033059562941135 %)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,399 | INFO     | left removable region: 20
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | sum of square deviations: 379832238.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | sum of deviations: -29638637544.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | mean x: 1769920833.0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | mean y: 2653099.261682243
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | intersect: 138111104154.07068
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | chi2: 0.1975594367219827
[2026-02-01 14:42:18] 2026-02-01 05:41:22,400 | INFO     | current memory leak: -78.03 B/s (using 107 data points, chi2=0.20)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | could have reported an average CPU frequency of 3699 MHz (8 samples)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | ..............................
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . Timing measurements:
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . get job = 0 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . initial setup = 9 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . payload setup = 5 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . stage-in = 0 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . payload execution = 8099 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . stage-out = 0 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | . log creation = 0 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,401 | INFO     | ..............................
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | 
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | job summary report
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | --------------------------------------------------
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | PanDA job id: 6994404355
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | task id: 48431080
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | errors: (none)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | pilot state: finished 
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | transexitcode: 0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | exeerrorcode: 0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | exeerrordiag: 
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | exitcode: 0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | exitmsg: OK
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | cpuconsumptiontime: 45850 s
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | nevents: 400
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | neventsw: 0
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | pid: 701910
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | pgrp: 701910
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | corecount: 6
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | event service: False
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | sizes: {0: 2278314, 11: 2278314, 8108: 2306191, 8110: 2315189, 8111: 2315245, 8112: 2315439}
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | --------------------------------------------------
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | 
[2026-02-01 14:42:18] 2026-02-01 05:41:22,467 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,480 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 14:42:18] 2026-02-01 05:41:22,481 | INFO     | job 6994404355 has completed (purged errors)
[2026-02-01 14:42:18] 2026-02-01 05:41:22,482 | INFO     | overall cleanup function is called
[2026-02-01 14:42:18] 2026-02-01 05:41:23,488 | INFO     | --- collectZombieJob: --- 10, [701910]
[2026-02-01 14:42:18] 2026-02-01 05:41:23,488 | INFO     | zombie collector waiting for pid 701910
[2026-02-01 14:42:18] 2026-02-01 05:41:23,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 14:42:18] 2026-02-01 05:41:23,488 | INFO     | collected zombie processes
[2026-02-01 14:42:18] 2026-02-01 05:41:23,488 | INFO     | will attempt to kill all subprocesses of pid=701910
[2026-02-01 14:42:18] 2026-02-01 05:41:23,549 | INFO     | process IDs to be killed: [701910] (in reverse order)
[2026-02-01 14:42:18] 2026-02-01 05:41:23,574 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 14:42:18] 2026-02-01 05:41:23,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 14:42:18] 2026-02-01 05:41:23,575 | INFO     | did not find any defunct processes belonging to 701910
[2026-02-01 14:42:18] 2026-02-01 05:41:23,576 | INFO     | did not find any defunct processes belonging to 701910
[2026-02-01 14:42:18] 2026-02-01 05:41:23,576 | INFO     | ready for new job
[2026-02-01 14:42:18] 2026-02-01 05:41:23,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 14:42:18] 2026-02-01 05:41:23,577 | INFO     | **************************************
[2026-02-01 14:42:18] 2026-02-01 05:41:23,577 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 14:42:18] 2026-02-01 05:41:23,577 | INFO     | **************************************
[2026-02-01 14:42:18] 2026-02-01 05:41:23,577 | INFO     | 
[2026-02-01 14:42:18] 2026-02-01 05:41:23,577 | INFO     | architecture information:
[2026-02-01 14:42:18] 2026-02-01 05:41:23,578 | INFO     | executing command: cat /etc/os-release
[2026-02-01 14:42:18] 2026-02-01 05:41:23,586 | INFO     | cat /etc/os-release:
[2026-02-01 14:42:18] NAME="CentOS Linux"
[2026-02-01 14:42:18] VERSION="7 (Core)"
[2026-02-01 14:42:18] ID="centos"
[2026-02-01 14:42:18] ID_LIKE="rhel fedora"
[2026-02-01 14:42:18] VERSION_ID="7"
[2026-02-01 14:42:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 14:42:18] ANSI_COLOR="0;31"
[2026-02-01 14:42:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 14:42:18] HOME_URL="https://www.centos.org/"
[2026-02-01 14:42:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 14:42:18] 
[2026-02-01 14:42:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 14:42:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 14:42:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 14:42:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 14:42:18] 
[2026-02-01 14:42:18] 2026-02-01 05:41:23,586 | INFO     | **************************************
[2026-02-01 14:42:18] 2026-02-01 05:41:24,088 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-01 14:42:18] 2026-02-01 05:41:24,096 | INFO     | sufficient remaining disk space (102106136576 B)
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | INFO     | update_server=False
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 14:42:18] 2026-02-01 05:41:24,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 14:42:18] 2026-02-01 05:41:24,387 | INFO     | all data control threads have been joined
[2026-02-01 14:42:18] 2026-02-01 05:41:24,524 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-01 14:42:18] 2026-02-01 05:41:24,524 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-01 14:42:18] 2026-02-01 05:41:24,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 14:42:18] 2026-02-01 05:41:24,524 | INFO     | will abort loop
[2026-02-01 14:42:18] 2026-02-01 05:41:25,075 | INFO     | all payload control threads have been joined
[2026-02-01 14:42:18] 2026-02-01 05:41:25,102 | INFO     | [job] retrieve thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,103 | INFO     | [job] queue monitor thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,232 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,277 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,392 | INFO     | [data] control thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,397 | INFO     | [data] copytool_in thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,521 | INFO     | all job control threads have been joined
[2026-02-01 14:42:18] 2026-02-01 05:41:25,530 | INFO     | [job] job monitor thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:25,999 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,080 | INFO     | [payload] control thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,102 | INFO     | [data] copytool_out thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,240 | INFO     | [payload] failed_post thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,373 | INFO     | [job] validate thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,463 | INFO     | [payload] validate_post thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,526 | INFO     | [job] control thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:26,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:28,103 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 14:42:18] 2026-02-01 05:41:54,413 | INFO     | PID=697262 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 14:42:18] 2026-02-01 05:41:54,414 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 14:42:18] 2026-02-01 05:41:54,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 14:42:18] 2026-02-01 05:41:54,414 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 14:42:18] 2026-02-01 05:42:12,591 | INFO     | [monitor] cgroup control has ended
[2026-02-01 14:42:18] 2026-02-01 05:42:13,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615143470912)>', '<ExcThread(monitor, started 140614771386112)>']
[2026-02-01 14:42:18] 2026-02-01 05:42:14,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 14:42:18] 2026-02-01 05:42:14,514 | INFO     | [monitor] control thread has ended
[2026-02-01 14:42:18] 2026-02-01 05:42:18,621 | INFO     | all workflow threads have been joined
[2026-02-01 14:42:18] 2026-02-01 05:42:18,621 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 14:42:18] 2026-02-01 05:42:18,621 | INFO     | traces error code: 0
[2026-02-01 14:42:18] 2026-02-01 05:42:18,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 14:42:18] 2026-02-01 05:42:18,699 [wrapper] ==== pilot stdout END ====
[2026-02-01 14:42:18] 2026-02-01 05:42:18,701 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 14:42:18] 2026-02-01 05:42:18,702 [wrapper] pilotpid: 697262
[2026-02-01 14:42:18] 2026-02-01 05:42:18,705 [wrapper] Pilot exit status: 0
[2026-02-01 14:42:18] 2026-02-01 05:42:18,710 [wrapper] pandaids: 6994404355
[2026-02-01 14:42:18] 2026-02-01 05:42:18,725 [wrapper] cleanup supervisor_pilot  706996 697263
[2026-02-01 14:42:18] 2026-02-01 05:42:18,727 [wrapper] Test setup, not cleaning
[2026-02-01 14:42:18] 2026-02-01 05:42:18,728 [wrapper] apfmon messages muted
[2026-02-01 14:42:18] 2026-02-01 05:42:18,730 [wrapper] ==== wrapper stdout END ====
[2026-02-01 14:42:18] 2026-02-01 05:42:18,731 [wrapper] ==== wrapper stderr END ====
[2026-02-01 14:42:18]  *** Error codes and diagnostics ***
[2026-02-01 14:42:18]     "exeErrorCode": 0,
[2026-02-01 14:42:18]     "exeErrorDiag": "",
[2026-02-01 14:42:18]     "pilotErrorCode": 0,
[2026-02-01 14:42:18]     "pilotErrorDiag": "",
[2026-02-01 14:42:18]  *** Listing of results directory ***
[2026-02-01 14:42:18] total 895064
[2026-02-01 14:42:18] -rwx------. 1 boinc boinc     36322 Jan 31 13:31 runpilot2-wrapper.sh
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc      5111 Jan 31 13:35 queuedata.json
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc    584422 Jan 31 13:35 pilot3.tar.gz
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc       100 Feb  1 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 14:42:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 12:25 run_atlas
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc       105 Feb  1 12:25 job.xml
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc 652314761 Feb  1 12:25 EVNT.48431078._000042.pool.root.1
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc     15845 Feb  1 12:25 start_atlas.sh
[2026-02-01 14:42:18] drwxrwx--x. 2 boinc boinc        68 Feb  1 12:25 shared
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc    597770 Feb  1 12:25 input.tar.gz
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc      9345 Feb  1 12:25 init_data.xml
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc         0 Feb  1 12:25 boinc_lockfile
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc      2557 Feb  1 12:25 pandaJob.out
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc   1010520 Feb  1 12:25 agis_schedconf.cvmfs.json
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc   1511668 Feb  1 12:25 agis_ddmendpoints.agis.ALL.json
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc       426 Feb  1 12:25 workernode_map.json
[2026-02-01 14:42:18] drwx------. 5 boinc boinc      4096 Feb  1 12:25 pilot3
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc 257217761 Feb  1 14:40 HITS.48431080._002170.pool.root.1
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc       530 Feb  1 14:41 boinc_task_state.xml
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc      1016 Feb  1 14:41 memory_monitor_summary.json
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc    377568 Feb  1 14:41 log.48431080._002170.job.log.tgz.1
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc      6325 Feb  1 14:41 heartbeat.json
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc        95 Feb  1 14:41 pilot_heartbeat.json
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc      8192 Feb  1 14:42 boinc_mmap_file
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc        27 Feb  1 14:42 wrapper_checkpoint.txt
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc      4930 Feb  1 14:42 pilotlog.txt
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc   1156655 Feb  1 14:42 log.48431080._002170.job.log.1
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc       357 Feb  1 14:42 output.list
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc       620 Feb  1 14:42 runtime_log
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc   1556480 Feb  1 14:42 result.tar.gz
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc       640 Feb  1 14:42 rY3LDmWpH68n9Rq4apOajLDm4fhM0noT9bVooX4SDmMiMKDmeOv1Qm.diag
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc      8764 Feb  1 14:42 runtime_log.err
[2026-02-01 14:42:18] -rw-r--r--. 1 boinc boinc     21299 Feb  1 14:42 stderr.txt
[2026-02-01 14:42:18] HITS file was successfully produced:
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc 257217761 Feb  1 14:40 shared/HITS.pool.root.1
[2026-02-01 14:42:18]  *** Contents of shared directory: ***
[2026-02-01 14:42:18] total 890344
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc 652314761 Feb  1 12:25 ATLAS.root_0
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc     15845 Feb  1 12:25 start_atlas.sh
[2026-02-01 14:42:18] -rw-r--r--. 2 boinc boinc    597770 Feb  1 12:25 input.tar.gz
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc 257217761 Feb  1 14:40 HITS.pool.root.1
[2026-02-01 14:42:18] -rw-------. 1 boinc boinc   1556480 Feb  1 14:42 result.tar.gz
14:42:20 (693112): run_atlas exited; CPU time 45933.910437
14:42:20 (693112): called boinc_finish(0)

</stderr_txt>
]]>

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