Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:20 (679115): wrapper (7.7.26015): starting
10:13:20 (679115): wrapper: running run_atlas (--nthreads 6)
[2026-02-01 10:13:20] Arguments: --nthreads 6
[2026-02-01 10:13:20] Threads: 6
[2026-02-01 10:13:20] Checking for CVMFS
[2026-02-01 10:13:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-01 10:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-01 10:13:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-01 10:13:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-01 10:13:25] 2.13.3.0 636943 410 57968 155732 2 50 41276312 52428800 0 130560 0 137877 99.975 13900 167 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-01 10:13:25] CVMFS is ok
[2026-02-01 10:13:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-01 10:13:25] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-01 10:13:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-01 10:13:25] Further information can be found at the LHC@home message board.
[2026-02-01 10:13:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-01 10:13:25] Checking for apptainer binary...
[2026-02-01 10:13:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-01 10:13:25] Running /usr/bin/apptainer --version
[2026-02-01 10:13:25] apptainer version 1.4.5-2.el9
[2026-02-01 10:13:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-01 10:13:25] Atto003
[2026-02-01 10:13:25] apptainer works
[2026-02-01 10:13:25] Set ATHENA_PROC_NUMBER=6
[2026-02-01 10:13:25] Set ATHENA_CORE_NUMBER=6
[2026-02-01 10:13:25] Starting ATLAS job with PandaID=6994404919
[2026-02-01 10:13:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-01 12:25:25]  *** The last 200 lines of the pilot log: ***
[2026-02-01 12:25:25] 2026-02-01 03:24:53,308 | INFO     | job 6994404919 has finished - writing final server update
[2026-02-01 12:25:25] 2026-02-01 03:24:53,308 | INFO     | total number of processed events: 400 (read)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,311 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6994404919/memory_monitor_summary.json (trf name=prmon)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,311 | INFO     | extracted standard info from prmon json
[2026-02-01 12:25:25] 2026-02-01 03:24:53,311 | INFO     | extracted standard memory fields from prmon json
[2026-02-01 12:25:25] 2026-02-01 03:24:53,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-01 12:25:25] 2026-02-01 03:24:53,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-01 12:25:25] 2026-02-01 03:24:53,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | fitting pss+swap vs Time
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | sum of square deviations: 665612480.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | sum of deviations: 8733285270.999998
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | mean x: 1769912355.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | mean y: 2533123.4496124033
[2026-02-01 12:25:25] 2026-02-01 03:24:53,314 | INFO     | intersect: -23219912316.399143
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | chi2: 1.6604869987881938
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | sum of square deviations: 591173875.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | sum of deviations: 8877962082.000004
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | mean x: 1769912202.5
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | mean y: 2533419.9516129033
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | intersect: -26577148272.281677
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | chi2: 1.6629529016358726
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | current chi2=1.6629529016358726 (change=-0.1485047970552236 %)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,315 | INFO     | right removable region: 123
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | sum of square deviations: 591173875.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | sum of deviations: -13868604522.500002
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | mean x: 1769912507.5
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | mean y: 2578779.3629032257
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | intersect: 41523724492.954895
[2026-02-01 12:25:25] 2026-02-01 03:24:53,316 | INFO     | chi2: 0.03271512313509609
[2026-02-01 12:25:25] 2026-02-01 03:24:53,317 | INFO     | current chi2=0.03271512313509609 (change=98.02978745639254 %)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,317 | INFO     | sum of square deviations: 522502820.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,317 | INFO     | sufficient remaining disk space (101467553792 B)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,317 | INFO     | sum of deviations: -13706723973.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | mean x: 1769912660.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | mean y: 2578399.294117647
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | intersect: 46432383863.19228
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | chi2: 0.02747051995507783
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | current chi2=0.02747051995507783 (change=16.031127739794325 %)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,318 | INFO     | left removable region: 20
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | sum of square deviations: 338804492.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | sum of deviations: -10495088857.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | mean x: 1769912782.0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | mean y: 2575348.834951456
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | intersect: 54828861171.013695
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | chi2: 0.02411570668294117
[2026-02-01 12:25:25] 2026-02-01 03:24:53,319 | INFO     | size of work directory /var/lib/boinc/slots/9/PanDA_Pilot-6994404919: 2763891 B (within 5033164800 B limit)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,321 | INFO     | current memory leak: -30.98 B/s (using 103 data points, chi2=0.02)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,321 | INFO     | pfn file=/var/lib/boinc/slots/9/PanDA_Pilot-6994404919/HITS.48431080._002328.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,321 | INFO     | total size of present files: 0 B (workdir size: 2763891 B)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | could have reported an average CPU frequency of 3700 MHz (8 samples)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/9/PanDA_Pilot-6994404919/HITS.48431080._002328.pool.root.1 since it does not exist
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | ..............................
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . Timing measurements:
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . get job = 0 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . initial setup = 8 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . payload setup = 5 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . stage-in = 0 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . payload execution = 7839 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,322 | INFO     | . stage-out = 0 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,323 | INFO     | . log creation = 0 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,323 | INFO     | ..............................
[2026-02-01 12:25:25] 2026-02-01 03:24:53,388 | INFO     | 
[2026-02-01 12:25:25] 2026-02-01 03:24:53,388 | INFO     | job summary report
[2026-02-01 12:25:25] 2026-02-01 03:24:53,388 | INFO     | --------------------------------------------------
[2026-02-01 12:25:25] 2026-02-01 03:24:53,388 | INFO     | PanDA job id: 6994404919
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | task id: 48431080
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | errors: (none)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | pilot state: finished 
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | transexitcode: 0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | exeerrorcode: 0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | exeerrordiag: 
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | exitcode: 0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,389 | INFO     | exitmsg: OK
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | cpuconsumptiontime: 45095 s
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | nevents: 400
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | neventsw: 0
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | pid: 687914
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | pgrp: 687914
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | corecount: 6
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | event service: False
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | sizes: {0: 2277934, 1: 2278338, 11: 2278338, 7848: 2306102, 7849: 2315155, 7850: 2315155, 7852: 2315505}
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | --------------------------------------------------
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | 
[2026-02-01 12:25:25] 2026-02-01 03:24:53,390 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-01 12:25:25] 2026-02-01 03:24:53,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | job 6994404919 has completed (purged errors)
[2026-02-01 12:25:25] 2026-02-01 03:24:53,404 | INFO     | overall cleanup function is called
[2026-02-01 12:25:25] 2026-02-01 03:24:53,454 | INFO     | number of running child processes to parent process 687914: 1
[2026-02-01 12:25:25] 2026-02-01 03:24:53,455 | INFO     | maximum number of monitored processes: 6
[2026-02-01 12:25:25] 2026-02-01 03:24:53,455 | INFO     | aborting job monitoring since job object (job id=6994404919) has expired
[2026-02-01 12:25:25] 2026-02-01 03:24:54,411 | INFO     | --- collectZombieJob: --- 10, [687914]
[2026-02-01 12:25:25] 2026-02-01 03:24:54,411 | INFO     | zombie collector waiting for pid 687914
[2026-02-01 12:25:25] 2026-02-01 03:24:54,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-01 12:25:25] 2026-02-01 03:24:54,411 | INFO     | collected zombie processes
[2026-02-01 12:25:25] 2026-02-01 03:24:54,411 | INFO     | will attempt to kill all subprocesses of pid=687914
[2026-02-01 12:25:25] 2026-02-01 03:24:54,472 | INFO     | process IDs to be killed: [687914] (in reverse order)
[2026-02-01 12:25:25] 2026-02-01 03:24:54,496 | WARNING  | found no corresponding commands to process id(s)
[2026-02-01 12:25:25] 2026-02-01 03:24:54,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-01 12:25:25] 2026-02-01 03:24:54,499 | INFO     | did not find any defunct processes belonging to 687914
[2026-02-01 12:25:25] 2026-02-01 03:24:54,500 | INFO     | did not find any defunct processes belonging to 687914
[2026-02-01 12:25:25] 2026-02-01 03:24:54,500 | INFO     | ready for new job
[2026-02-01 12:25:25] 2026-02-01 03:24:54,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-01 12:25:25] 2026-02-01 03:24:54,501 | INFO     | **************************************
[2026-02-01 12:25:25] 2026-02-01 03:24:54,502 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-01 12:25:25] 2026-02-01 03:24:54,502 | INFO     | **************************************
[2026-02-01 12:25:25] 2026-02-01 03:24:54,502 | INFO     | 
[2026-02-01 12:25:25] 2026-02-01 03:24:54,502 | INFO     | architecture information:
[2026-02-01 12:25:25] 2026-02-01 03:24:54,503 | INFO     | executing command: cat /etc/os-release
[2026-02-01 12:25:25] 2026-02-01 03:24:54,511 | INFO     | cat /etc/os-release:
[2026-02-01 12:25:25] NAME="CentOS Linux"
[2026-02-01 12:25:25] VERSION="7 (Core)"
[2026-02-01 12:25:25] ID="centos"
[2026-02-01 12:25:25] ID_LIKE="rhel fedora"
[2026-02-01 12:25:25] VERSION_ID="7"
[2026-02-01 12:25:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-01 12:25:25] ANSI_COLOR="0;31"
[2026-02-01 12:25:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-01 12:25:25] HOME_URL="https://www.centos.org/"
[2026-02-01 12:25:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-01 12:25:25] 
[2026-02-01 12:25:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-01 12:25:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-01 12:25:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-01 12:25:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-01 12:25:25] 
[2026-02-01 12:25:25] 2026-02-01 03:24:54,511 | INFO     | **************************************
[2026-02-01 12:25:25] 2026-02-01 03:24:55,014 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-01 12:25:25] 2026-02-01 03:24:55,023 | INFO     | sufficient remaining disk space (101472796672 B)
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | INFO     | current server update state: UPDATING_FINAL
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | INFO     | update_server=False
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-01 12:25:25] 2026-02-01 03:24:55,024 | INFO     | aborting loop
[2026-02-01 12:25:25] 2026-02-01 03:24:55,159 | INFO     | all payload control threads have been joined
[2026-02-01 12:25:25] 2026-02-01 03:24:55,330 | INFO     | all data control threads have been joined
[2026-02-01 12:25:25] 2026-02-01 03:24:56,029 | INFO     | [job] queue monitor thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,029 | INFO     | [job] job monitor thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,029 | INFO     | [job] retrieve thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,087 | INFO     | [payload] validate_post thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,106 | INFO     | [job] create_data_payload thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,161 | INFO     | [payload] validate_pre thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,164 | INFO     | [payload] control thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,334 | INFO     | [data] control thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:56,592 | INFO     | job.realtimelogging is not enabled
[2026-02-01 12:25:25] 2026-02-01 03:24:56,675 | INFO     | all job control threads have been joined
[2026-02-01 12:25:25] 2026-02-01 03:24:56,826 | INFO     | [payload] execute_payloads thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,029 | INFO     | [data] copytool_out thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,143 | INFO     | [data] copytool_in thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,149 | INFO     | [job] validate thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-01 12:25:25] 2026-02-01 03:24:57,385 | INFO     | [payload] failed_post thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,597 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:24:57,680 | INFO     | [job] control thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:25:01,298 | INFO     | [data] queue_monitor thread has finished
[2026-02-01 12:25:25] 2026-02-01 03:25:03,466 | INFO     | [monitor] cgroup control has ended
[2026-02-01 12:25:25] 2026-02-01 03:25:03,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140084019525440)>', '<ExcThread(monitor, started 140083571189504)>']
[2026-02-01 12:25:25] 2026-02-01 03:25:08,701 | INFO     | all workflow threads have been joined
[2026-02-01 12:25:25] 2026-02-01 03:25:08,701 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-01 12:25:25] 2026-02-01 03:25:08,701 | INFO     | traces error code: 0
[2026-02-01 12:25:25] 2026-02-01 03:25:08,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | INFO     | PID=683263 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | INFO     | found 0 job(s) in 20 queues
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-01 12:25:25] 2026-02-01 03:25:25,472 | INFO     | [monitor] control thread has ended
[2026-02-01 12:25:25] 2026-02-01 03:25:25,544 [wrapper] ==== pilot stdout END ====
[2026-02-01 12:25:25] 2026-02-01 03:25:25,548 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-01 12:25:25] 2026-02-01 03:25:25,550 [wrapper] pilotpid: 683263
[2026-02-01 12:25:25] 2026-02-01 03:25:25,554 [wrapper] Pilot exit status: 0
[2026-02-01 12:25:25] 2026-02-01 03:25:25,565 [wrapper] pandaids: 6994404919
[2026-02-01 12:25:25] 2026-02-01 03:25:25,584 [wrapper] cleanup supervisor_pilot  692930 683264
[2026-02-01 12:25:25] 2026-02-01 03:25:25,586 [wrapper] Test setup, not cleaning
[2026-02-01 12:25:25] 2026-02-01 03:25:25,587 [wrapper] apfmon messages muted
[2026-02-01 12:25:25] 2026-02-01 03:25:25,588 [wrapper] ==== wrapper stdout END ====
[2026-02-01 12:25:25] 2026-02-01 03:25:25,590 [wrapper] ==== wrapper stderr END ====
[2026-02-01 12:25:25]  *** Error codes and diagnostics ***
[2026-02-01 12:25:25]     "exeErrorCode": 0,
[2026-02-01 12:25:25]     "exeErrorDiag": "",
[2026-02-01 12:25:25]     "pilotErrorCode": 0,
[2026-02-01 12:25:25]     "pilotErrorDiag": "",
[2026-02-01 12:25:25]  *** Listing of results directory ***
[2026-02-01 12:25:25] total 896600
[2026-02-01 12:25:25] -rwx------. 1 boinc boinc     36322 Jan 31 13:32 runpilot2-wrapper.sh
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc      5111 Jan 31 13:35 queuedata.json
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc    584422 Jan 31 13:35 pilot3.tar.gz
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc       100 Feb  1 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-01 12:25:25] -rwxr-xr-x. 1 boinc boinc      7986 Feb  1 10:13 run_atlas
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc       105 Feb  1 10:13 job.xml
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc 654797928 Feb  1 10:13 EVNT.48431078._000046.pool.root.1
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc     15845 Feb  1 10:13 start_atlas.sh
[2026-02-01 12:25:25] drwxrwx--x. 2 boinc boinc        68 Feb  1 10:13 shared
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc    597775 Feb  1 10:13 input.tar.gz
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc         0 Feb  1 10:13 boinc_lockfile
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc      2555 Feb  1 10:13 pandaJob.out
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc   1010520 Feb  1 10:13 agis_schedconf.cvmfs.json
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc   1511668 Feb  1 10:13 agis_ddmendpoints.agis.ALL.json
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc       417 Feb  1 10:13 workernode_map.json
[2026-02-01 12:25:25] drwx------. 5 boinc boinc      4096 Feb  1 10:13 pilot3
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc      9352 Feb  1 12:19 init_data.xml
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc 256497972 Feb  1 12:24 HITS.48431080._002328.pool.root.1
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc       530 Feb  1 12:24 boinc_task_state.xml
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc        95 Feb  1 12:24 pilot_heartbeat.json
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc      1014 Feb  1 12:24 memory_monitor_summary.json
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc    327066 Feb  1 12:24 log.48431080._002328.job.log.tgz.1
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc      6304 Feb  1 12:24 heartbeat.json
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc      8192 Feb  1 12:25 boinc_mmap_file
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc        27 Feb  1 12:25 wrapper_checkpoint.txt
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc       746 Feb  1 12:25 pilotlog.txt
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc   1122224 Feb  1 12:25 log.48431080._002328.job.log.1
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc       357 Feb  1 12:25 output.list
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc       620 Feb  1 12:25 runtime_log
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc   1464320 Feb  1 12:25 result.tar.gz
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc       640 Feb  1 12:25 tYHNDmgpH68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm22MKDmHeiwNo.diag
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc      8764 Feb  1 12:25 runtime_log.err
[2026-02-01 12:25:25] -rw-r--r--. 1 boinc boinc     21528 Feb  1 12:25 stderr.txt
[2026-02-01 12:25:25] HITS file was successfully produced:
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc 256497972 Feb  1 12:24 shared/HITS.pool.root.1
[2026-02-01 12:25:25]  *** Contents of shared directory: ***
[2026-02-01 12:25:25] total 891976
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc 654797928 Feb  1 10:13 ATLAS.root_0
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc     15845 Feb  1 10:13 start_atlas.sh
[2026-02-01 12:25:25] -rw-r--r--. 2 boinc boinc    597775 Feb  1 10:13 input.tar.gz
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc 256497972 Feb  1 12:24 HITS.pool.root.1
[2026-02-01 12:25:25] -rw-------. 1 boinc boinc   1464320 Feb  1 12:25 result.tar.gz
12:25:27 (679115): run_atlas exited; CPU time 45177.049637
12:25:27 (679115): called boinc_finish(0)

</stderr_txt>
]]>

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