Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:52:07 (29256): wrapper (7.7.26015): starting
13:52:07 (29256): wrapper: running run_atlas (--nthreads 8)
[2026-01-31 13:52:07] Arguments: --nthreads 8
[2026-01-31 13:52:07] Threads: 8
[2026-01-31 13:52:07] Checking for CVMFS
[2026-01-31 13:52:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 13:52:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 13:52:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 13:52:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 13:52:10] 2.11.2.0 11585 67118 134912 155714 0 53 18650504 25165824 899 130560 0 24702881 99.850 16772419 3240 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-31 13:52:10] CVMFS is ok
[2026-01-31 13:52:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 13:52:10] Checking for apptainer binary...
[2026-01-31 13:52:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 13:52:10] Running /usr/bin/apptainer --version
[2026-01-31 13:52:10] apptainer version 1.3.2-1.el7
[2026-01-31 13:52:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 13:52:38] cg-vwn455.simple-grid.lan
[2026-01-31 13:52:38] apptainer works
[2026-01-31 13:52:38] Set ATHENA_PROC_NUMBER=8
[2026-01-31 13:52:38] Set ATHENA_CORE_NUMBER=8
[2026-01-31 13:52:38] Starting ATLAS job with PandaID=6987964741
[2026-01-31 13:52:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 17:31:19]  *** The last 200 lines of the pilot log: ***
[2026-01-31 17:31:19] 2026-01-31 16:30:28,655 | INFO     | total number of processed events: 400 (read)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,657 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6987964741/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,658 | INFO     | extracted standard info from prmon json
[2026-01-31 17:31:19] 2026-01-31 16:30:28,658 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 17:31:19] 2026-01-31 16:30:28,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 17:31:19] 2026-01-31 16:30:28,659 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 17:31:19] 2026-01-31 16:30:28,659 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 17:31:19] 2026-01-31 16:30:28,662 | INFO     | fitting pss+swap vs Time
[2026-01-31 17:31:19] 2026-01-31 16:30:28,663 | INFO     | sum of square deviations: 2632440055.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,664 | INFO     | sum of deviations: 106239351493.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,665 | INFO     | mean x: 1769870813.5
[2026-01-31 17:31:19] 2026-01-31 16:30:28,665 | INFO     | mean y: 2402508.9215686275
[2026-01-31 17:31:19] 2026-01-31 16:30:28,665 | INFO     | intersect: -71425597188.73094
[2026-01-31 17:31:19] 2026-01-31 16:30:28,665 | INFO     | chi2: 7.944327916837516
[2026-01-31 17:31:19] 2026-01-31 16:30:28,666 | INFO     | sum of square deviations: 2443580700.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,667 | INFO     | sum of deviations: 116764518046.99998
[2026-01-31 17:31:19] 2026-01-31 16:30:28,667 | INFO     | mean x: 1769870661.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,667 | INFO     | mean y: 2410792.030150754
[2026-01-31 17:31:19] 2026-01-31 16:30:28,667 | INFO     | intersect: -84569420511.59338
[2026-01-31 17:31:19] 2026-01-31 16:30:28,668 | INFO     | chi2: 7.245194068991502
[2026-01-31 17:31:19] 2026-01-31 16:30:28,668 | INFO     | current chi2=7.245194068991502 (change=8.80041527948818 %)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,668 | INFO     | right removable region: 198
[2026-01-31 17:31:19] 2026-01-31 16:30:28,668 | INFO     | sum of square deviations: 2443580700.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,670 | INFO     | sum of deviations: 35970022988.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,670 | INFO     | mean x: 1769870966.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,670 | INFO     | mean y: 2459209.864321608
[2026-01-31 17:31:19] 2026-01-31 16:30:28,670 | INFO     | intersect: -26050414481.933033
[2026-01-31 17:31:19] 2026-01-31 16:30:28,670 | INFO     | chi2: 2.9020808154480875
[2026-01-31 17:31:19] 2026-01-31 16:30:28,671 | INFO     | current chi2=2.9020808154480875 (change=63.469775595525135 %)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,671 | INFO     | sum of square deviations: 2263977332.5
[2026-01-31 17:31:19] 2026-01-31 16:30:28,672 | INFO     | sum of deviations: -8558021992.500002
[2026-01-31 17:31:19] 2026-01-31 16:30:28,672 | INFO     | mean x: 1769871118.5
[2026-01-31 17:31:19] 2026-01-31 16:30:28,673 | INFO     | mean y: 2496853.324742268
[2026-01-31 17:31:19] 2026-01-31 16:30:28,673 | INFO     | intersect: 6692756397.2610445
[2026-01-31 17:31:19] 2026-01-31 16:30:28,673 | INFO     | chi2: 0.851850982020627
[2026-01-31 17:31:19] 2026-01-31 16:30:28,673 | INFO     | current chi2=0.851850982020627 (change=70.64688972525737 %)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,673 | INFO     | sum of square deviations: 2093397390.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | sum of deviations: -14829712867.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | mean x: 1769871271.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | mean y: 2502440.904761905
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | intersect: 12540343027.62793
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | chi2: 0.7979881800770503
[2026-01-31 17:31:19] 2026-01-31 16:30:28,675 | INFO     | current chi2=0.7979881800770503 (change=6.323031032471414 %)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,676 | INFO     | left removable region: 30
[2026-01-31 17:31:19] 2026-01-31 16:30:28,676 | INFO     | sum of square deviations: 1470248962.0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,677 | INFO     | sum of deviations: -3598520875.4999995
[2026-01-31 17:31:19] 2026-01-31 16:30:28,677 | INFO     | mean x: 1769871545.5
[2026-01-31 17:31:19] 2026-01-31 16:30:28,677 | INFO     | mean y: 2515564.6964285714
[2026-01-31 17:31:19] 2026-01-31 16:30:28,677 | INFO     | intersect: 4334380349.536315
[2026-01-31 17:31:19] 2026-01-31 16:30:28,677 | INFO     | chi2: 0.003793252545242719
[2026-01-31 17:31:19] 2026-01-31 16:30:28,678 | INFO     | current memory leak: -2.45 B/s (using 168 data points, chi2=0.00)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,678 | INFO     | could have reported an average CPU frequency of 2250 MHz (11 samples)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,678 | INFO     | ..............................
[2026-01-31 17:31:19] 2026-01-31 16:30:28,678 | INFO     | . Timing measurements:
[2026-01-31 17:31:19] 2026-01-31 16:30:28,678 | INFO     | . get job = 0 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . initial setup = 115 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . payload setup = 161 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . stage-in = 0 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . payload execution = 12524 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . stage-out = 3 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | . log creation = 1 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,679 | INFO     | ..............................
[2026-01-31 17:31:19] 2026-01-31 16:30:28,926 | INFO     | 
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | job summary report
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | --------------------------------------------------
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | PanDA job id: 6987964741
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | task id: 48318042
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | errors: (none)
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | pilot state: finished 
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | transexitcode: 0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | exeerrorcode: 0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | exeerrordiag: 
[2026-01-31 17:31:19] 2026-01-31 16:30:28,927 | INFO     | exitcode: 0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | exitmsg: OK
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | cpuconsumptiontime: 59510 s
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | nevents: 400
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | neventsw: 0
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | pid: 5274
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | pgrp: 5274
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | corecount: 8
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | event service: False
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | sizes: {0: 2277196, 1: 2278254, 2: 2278342, 12690: 2308212, 12694: 2317210, 12697: 2317266, 12698: 2317588}
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | --------------------------------------------------
[2026-01-31 17:31:19] 2026-01-31 16:30:28,928 | INFO     | 
[2026-01-31 17:31:19] 2026-01-31 16:30:28,929 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-31 17:31:19] 2026-01-31 16:30:29,221 | INFO     | time since job start (12701s) is within the limit (349056.0s)
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 17:31:19] 2026-01-31 16:30:29,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 17:31:20] 2026-01-31 16:30:29,462 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 17:31:20] 2026-01-31 16:30:29,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 17:31:20] 2026-01-31 16:30:29,463 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 17:31:20] 2026-01-31 16:30:29,463 | INFO     | job 6987964741 has completed (purged errors)
[2026-01-31 17:31:20] 2026-01-31 16:30:29,463 | INFO     | overall cleanup function is called
[2026-01-31 17:31:20] 2026-01-31 16:30:30,471 | INFO     | --- collectZombieJob: --- 10, [5274]
[2026-01-31 17:31:20] 2026-01-31 16:30:30,471 | INFO     | zombie collector waiting for pid 5274
[2026-01-31 17:31:20] 2026-01-31 16:30:30,472 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 17:31:20] 2026-01-31 16:30:30,472 | INFO     | collected zombie processes
[2026-01-31 17:31:20] 2026-01-31 16:30:30,472 | INFO     | will attempt to kill all subprocesses of pid=5274
[2026-01-31 17:31:20] 2026-01-31 16:30:30,552 | INFO     | process IDs to be killed: [5274] (in reverse order)
[2026-01-31 17:31:20] 2026-01-31 16:30:31,507 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 17:31:20] 2026-01-31 16:30:31,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 17:31:20] 2026-01-31 16:30:31,509 | INFO     | did not find any defunct processes belonging to 5274
[2026-01-31 17:31:20] 2026-01-31 16:30:31,511 | INFO     | did not find any defunct processes belonging to 5274
[2026-01-31 17:31:20] 2026-01-31 16:30:31,511 | INFO     | ready for new job
[2026-01-31 17:31:20] 2026-01-31 16:30:31,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 17:31:20] 2026-01-31 16:30:31,513 | INFO     | **************************************
[2026-01-31 17:31:20] 2026-01-31 16:30:31,513 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 17:31:20] 2026-01-31 16:30:31,514 | INFO     | **************************************
[2026-01-31 17:31:20] 2026-01-31 16:30:31,514 | INFO     | 
[2026-01-31 17:31:20] 2026-01-31 16:30:31,514 | INFO     | pilot is running in a VM
[2026-01-31 17:31:20] 2026-01-31 16:30:31,514 | INFO     | architecture information:
[2026-01-31 17:31:20] 2026-01-31 16:30:31,521 | INFO     | executing command: cat /etc/os-release
[2026-01-31 17:31:20] 2026-01-31 16:30:31,806 | INFO     | cat /etc/os-release:
[2026-01-31 17:31:20] NAME="CentOS Linux"
[2026-01-31 17:31:20] VERSION="7 (Core)"
[2026-01-31 17:31:20] ID="centos"
[2026-01-31 17:31:20] ID_LIKE="rhel fedora"
[2026-01-31 17:31:20] VERSION_ID="7"
[2026-01-31 17:31:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 17:31:20] ANSI_COLOR="0;31"
[2026-01-31 17:31:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 17:31:20] HOME_URL="https://www.centos.org/"
[2026-01-31 17:31:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 17:31:20] 
[2026-01-31 17:31:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 17:31:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 17:31:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 17:31:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 17:31:20] 
[2026-01-31 17:31:20] 2026-01-31 16:30:31,806 | INFO     | **************************************
[2026-01-31 17:31:20] 2026-01-31 16:30:32,309 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-31 17:31:20] 2026-01-31 16:30:32,511 | INFO     | sufficient remaining disk space (495745761280 B)
[2026-01-31 17:31:20] 2026-01-31 16:30:32,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 17:31:20] 2026-01-31 16:30:32,512 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 17:31:20] 2026-01-31 16:30:32,512 | INFO     | update_server=False
[2026-01-31 17:31:20] 2026-01-31 16:30:32,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 17:31:20] 2026-01-31 16:30:32,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 17:31:20] 2026-01-31 16:30:32,594 | INFO     | aborting loop
[2026-01-31 17:31:20] 2026-01-31 16:30:32,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 17:31:20] 2026-01-31 16:30:33,291 | INFO     | all job control threads have been joined
[2026-01-31 17:31:20] 2026-01-31 16:30:33,475 | INFO     | all data control threads have been joined
[2026-01-31 17:31:20] 2026-01-31 16:30:33,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 17:31:20] 2026-01-31 16:30:33,517 | INFO     | [job] retrieve thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:33,587 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:33,599 | INFO     | [job] job monitor thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:33,830 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:33,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 17:31:20] 2026-01-31 16:30:33,954 | INFO     | all payload control threads have been joined
[2026-01-31 17:31:20] 2026-01-31 16:30:34,209 | INFO     | [data] copytool_in thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,297 | INFO     | [job] control thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,299 | INFO     | [payload] failed_post thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,468 | INFO     | [payload] validate_post thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,481 | INFO     | [data] control thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,604 | INFO     | [data] copytool_out thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,856 | INFO     | [job] queue monitor thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,890 | INFO     | [job] validate thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,960 | INFO     | [payload] control thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:34,997 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:35,008 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:30:37,494 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 17:31:20] 2026-01-31 16:31:01,335 | INFO     | 12819s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-31 17:31:20] 2026-01-31 16:31:02,447 | INFO     | PID=803 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-31 17:31:20] 2026-01-31 16:31:02,447 | INFO     | .. there are 2 such processes running
[2026-01-31 17:31:20] 2026-01-31 16:31:02,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 17:31:20] 2026-01-31 16:31:02,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 17:31:20] 2026-01-31 16:31:02,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 17:31:20] 2026-01-31 16:31:09,190 | INFO     | [monitor] cgroup control has ended
[2026-01-31 17:31:20] 2026-01-31 16:31:10,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673590351680)>', '<ExcThread(monitor, started 140672787015424)>']
[2026-01-31 17:31:20] 2026-01-31 16:31:11,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 17:31:20] 2026-01-31 16:31:11,501 | INFO     | [monitor] control thread has ended
[2026-01-31 17:31:20] 2026-01-31 16:31:15,645 | INFO     | all workflow threads have been joined
[2026-01-31 17:31:20] 2026-01-31 16:31:15,646 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 17:31:20] 2026-01-31 16:31:15,646 | INFO     | traces error code: 0
[2026-01-31 17:31:20] 2026-01-31 16:31:15,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 17:31:20] 2026-01-31 16:31:15,919 [wrapper] ==== pilot stdout END ====
[2026-01-31 17:31:20] 2026-01-31 16:31:15,990 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 17:31:20] 2026-01-31 16:31:16,116 [wrapper] pilotpid: 803
[2026-01-31 17:31:20] 2026-01-31 16:31:16,197 [wrapper] Pilot exit status: 0
[2026-01-31 17:31:20] 2026-01-31 16:31:16,638 [wrapper] pandaids: 6987964741
[2026-01-31 17:31:20] 2026-01-31 16:31:17,466 [wrapper] cleanup supervisor_pilot 26313 804
[2026-01-31 17:31:20] 2026-01-31 16:31:17,587 [wrapper] Test setup, not cleaning
[2026-01-31 17:31:20] 2026-01-31 16:31:17,670 [wrapper] apfmon messages muted
[2026-01-31 17:31:20] 2026-01-31 16:31:17,743 [wrapper] ==== wrapper stdout END ====
[2026-01-31 17:31:20] 2026-01-31 16:31:17,852 [wrapper] ==== wrapper stderr END ====
[2026-01-31 17:31:20]  *** Error codes and diagnostics ***
[2026-01-31 17:31:20]     "exeErrorCode": 0,
[2026-01-31 17:31:20]     "exeErrorDiag": "",
[2026-01-31 17:31:20]     "pilotErrorCode": 0,
[2026-01-31 17:31:20]     "pilotErrorDiag": "",
[2026-01-31 17:31:20]  *** Listing of results directory ***
[2026-01-31 17:31:20] total 681692
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc    584422 Jan 30 21:39 pilot3.tar.gz
[2026-01-31 17:31:20] -rwx------. 1 boinc boinc     36322 Jan 30 21:43 runpilot2-wrapper.sh
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc      5111 Jan 30 21:46 queuedata.json
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc       100 Jan 31 13:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 17:31:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 31 13:52 run_atlas
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc       105 Jan 31 13:52 job.xml
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc      6389 Jan 31 13:52 init_data.xml
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc 500423516 Jan 31 13:52 EVNT.48318040._000051.pool.root.1
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc     15845 Jan 31 13:52 start_atlas.sh
[2026-01-31 17:31:20] drwxrwx--x. 2 boinc boinc        68 Jan 31 13:52 shared
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc    597767 Jan 31 13:52 input.tar.gz
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc         0 Jan 31 13:52 boinc_lockfile
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc      2536 Jan 31 13:52 pandaJob.out
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc       413 Jan 31 13:58 workernode_map.json
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc   1010520 Jan 31 13:58 agis_schedconf.cvmfs.json
[2026-01-31 17:31:20] drwx------. 5 boinc boinc      4096 Jan 31 13:58 pilot3
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc 189150535 Jan 31 17:28 HITS.48318042._003453.pool.root.1
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc       531 Jan 31 17:29 boinc_task_state.xml
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc      1023 Jan 31 17:30 memory_monitor_summary.json
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc   1511668 Jan 31 17:30 agis_ddmendpoints.agis.ALL.json
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc    478625 Jan 31 17:30 log.48318042._003453.job.log.tgz.1
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc      6332 Jan 31 17:30 heartbeat.json
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc        95 Jan 31 17:30 pilot_heartbeat.json
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc      8192 Jan 31 17:31 boinc_mmap_file
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc        28 Jan 31 17:31 wrapper_checkpoint.txt
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc      4994 Jan 31 17:31 pilotlog.txt
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc   1799883 Jan 31 17:31 log.48318042._003453.job.log.1
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc       357 Jan 31 17:31 output.list
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc       620 Jan 31 17:31 runtime_log
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc   2293760 Jan 31 17:31 result.tar.gz
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc      8816 Jan 31 17:31 runtime_log.err
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc       655 Jan 31 17:31 jzRMDmHWA68n9Rq4apOajLDm4fhM0noT9bVooX4SDmj1LKDmhNtNvm.diag
[2026-01-31 17:31:20] -rw-r--r--. 1 boinc boinc     20721 Jan 31 17:31 stderr.txt
[2026-01-31 17:31:20] HITS file was successfully produced:
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc 189150535 Jan 31 17:28 shared/HITS.pool.root.1
[2026-01-31 17:31:20]  *** Contents of shared directory: ***
[2026-01-31 17:31:20] total 676256
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc 500423516 Jan 31 13:52 ATLAS.root_0
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc     15845 Jan 31 13:52 start_atlas.sh
[2026-01-31 17:31:20] -rw-r--r--. 2 boinc boinc    597767 Jan 31 13:52 input.tar.gz
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc 189150535 Jan 31 17:28 HITS.pool.root.1
[2026-01-31 17:31:20] -rw-------. 1 boinc boinc   2293760 Jan 31 17:31 result.tar.gz
17:31:21 (29256): run_atlas exited; CPU time 59630.400114
17:31:21 (29256): called boinc_finish(0)

</stderr_txt>
]]>

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