Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:57:11 (2392190): wrapper (7.7.26015): starting
08:57:11 (2392190): wrapper: running run_atlas (--nthreads 4)
[2026-01-31 08:57:11] Arguments: --nthreads 4
[2026-01-31 08:57:11] Threads: 4
[2026-01-31 08:57:11] Checking for CVMFS
[2026-01-31 08:57:11] No cvmfs_config command found, will try listing directly
[2026-01-31 08:57:11] CVMFS is ok
[2026-01-31 08:57:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 08:57:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 08:57:11] Further information can be found at the LHC@home message board.
[2026-01-31 08:57:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 08:57:11] Checking for apptainer binary...
[2026-01-31 08:57:11] which: no apptainer in ((null))
[2026-01-31 08:57:11] apptainer is not installed, using version from CVMFS
[2026-01-31 08:57:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 08:57:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-01-31 08:57:11] apptainer works
[2026-01-31 08:57:11] Set ATHENA_PROC_NUMBER=4
[2026-01-31 08:57:11] Set ATHENA_CORE_NUMBER=4
[2026-01-31 08:57:11] Starting ATLAS job with PandaID=6987896117
[2026-01-31 08:57:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 13:18:33]  *** The last 200 lines of the pilot log: ***
[2026-01-31 13:18:33] 2026-01-31 12:16:00,420 | INFO     | chi2: 0.21863377600812822
[2026-01-31 13:18:33] 2026-01-31 12:16:00,420 | INFO     | current chi2=0.21863377600812822 (change=85.17434247999516 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,420 | INFO     | sum of square deviations: 4504437945.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,422 | INFO     | sum of deviations: -10504893875.000002
[2026-01-31 13:18:33] 2026-01-31 12:16:00,422 | INFO     | mean x: 1769854290.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,423 | INFO     | mean y: 2362450.2131147543
[2026-01-31 13:18:33] 2026-01-31 12:16:00,423 | INFO     | intersect: 4129876631.3227677
[2026-01-31 13:18:33] 2026-01-31 12:16:00,423 | INFO     | chi2: 0.15500252685179844
[2026-01-31 13:18:33] 2026-01-31 12:16:00,423 | INFO     | current chi2=0.15500252685179844 (change=29.10403429795959 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,424 | INFO     | sum of square deviations: 4233158440.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,425 | INFO     | sum of deviations: 3556793428.999999
[2026-01-31 13:18:33] 2026-01-31 12:16:00,426 | INFO     | mean x: 1769854443.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,426 | INFO     | mean y: 2354542.79916318
[2026-01-31 13:18:33] 2026-01-31 12:16:00,426 | INFO     | intersect: -1484716338.7596319
[2026-01-31 13:18:33] 2026-01-31 12:16:00,426 | INFO     | chi2: 0.030637827510901376
[2026-01-31 13:18:33] 2026-01-31 12:16:00,426 | INFO     | current chi2=0.030637827510901376 (change=80.2339819013435 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,427 | INFO     | sum of square deviations: 3972995422.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,428 | INFO     | sum of deviations: 5557848378.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,429 | INFO     | mean x: 1769854595.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,429 | INFO     | mean y: 2353399.405982906
[2026-01-31 13:18:33] 2026-01-31 12:16:00,429 | INFO     | intersect: -2473507367.529106
[2026-01-31 13:18:33] 2026-01-31 12:16:00,429 | INFO     | chi2: 0.0010898618889254178
[2026-01-31 13:18:33] 2026-01-31 12:16:00,429 | INFO     | current chi2=0.0010898618889254178 (change=96.44275727925672 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,430 | INFO     | sum of square deviations: 3723716330.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,431 | INFO     | sum of deviations: 4495704696.999997
[2026-01-31 13:18:33] 2026-01-31 12:16:00,432 | INFO     | mean x: 1769854748.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,432 | INFO     | mean y: 2354049.2576419213
[2026-01-31 13:18:33] 2026-01-31 12:16:00,432 | INFO     | intersect: -2134421042.7352934
[2026-01-31 13:18:33] 2026-01-31 12:16:00,432 | INFO     | chi2: 0.0006853171260901498
[2026-01-31 13:18:33] 2026-01-31 12:16:00,432 | INFO     | current chi2=0.0006853171260901498 (change=37.11890166506704 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,433 | INFO     | sum of square deviations: 3485088600.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,434 | INFO     | sum of deviations: 3708750254.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,435 | INFO     | mean x: 1769854900.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,435 | INFO     | mean y: 2354551.433035714
[2026-01-31 13:18:33] 2026-01-31 12:16:00,435 | INFO     | intersect: -1881083881.8559911
[2026-01-31 13:18:33] 2026-01-31 12:16:00,435 | INFO     | chi2: 0.00047396029617297844
[2026-01-31 13:18:33] 2026-01-31 12:16:00,435 | INFO     | current chi2=0.00047396029617297844 (change=30.840733708640528 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,436 | INFO     | sum of square deviations: 3256879670.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,437 | INFO     | sum of deviations: 3097968387.0000014
[2026-01-31 13:18:33] 2026-01-31 12:16:00,437 | INFO     | mean x: 1769855053.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,438 | INFO     | mean y: 2354959.2602739725
[2026-01-31 13:18:33] 2026-01-31 12:16:00,438 | INFO     | intersect: -1681144451.00999
[2026-01-31 13:18:33] 2026-01-31 12:16:00,438 | INFO     | chi2: 0.0003570587111526129
[2026-01-31 13:18:33] 2026-01-31 12:16:00,438 | INFO     | current chi2=0.0003570587111526129 (change=24.664847660087684 %)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,438 | INFO     | left removable region: 70
[2026-01-31 13:18:33] 2026-01-31 12:16:00,439 | INFO     | sum of square deviations: 1748737904.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,440 | INFO     | sum of deviations: 1174003682.0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,440 | INFO     | mean x: 1769855937.5
[2026-01-31 13:18:33] 2026-01-31 12:16:00,440 | INFO     | mean y: 2355708.0786516853
[2026-01-31 13:18:33] 2026-01-31 12:16:00,440 | INFO     | intersect: -1185825426.3770874
[2026-01-31 13:18:33] 2026-01-31 12:16:00,441 | INFO     | chi2: 0.0002224884556167613
[2026-01-31 13:18:33] 2026-01-31 12:16:00,441 | INFO     | current memory leak: 0.67 B/s (using 178 data points, chi2=0.00)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,441 | INFO     | could have reported an average CPU frequency of 2522 MHz (12 samples)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | ..............................
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . Timing measurements:
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . get job = 0 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . initial setup = 5 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . payload setup = 5 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . stage-in = 0 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . payload execution = 15486 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . stage-out = 1 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | . log creation = 0 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,442 | INFO     | ..............................
[2026-01-31 13:18:33] 2026-01-31 12:16:00,913 | INFO     | time since job start (15513s) is within the limit (349056.0s)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,960 | INFO     | 
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | job summary report
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | --------------------------------------------------
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | PanDA job id: 6987896117
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | task id: 48329021
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | errors: (none)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 13:18:33] 2026-01-31 12:16:00,961 | INFO     | pilot state: finished 
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | transexitcode: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | exeerrorcode: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | exeerrordiag: 
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | exitcode: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | exitmsg: OK
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | cpuconsumptiontime: 59593 s
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | nevents: 400
[2026-01-31 13:18:33] 2026-01-31 12:16:00,962 | INFO     | neventsw: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | pid: 2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | pgrp: 2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | corecount: 4
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | event service: False
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | sizes: {0: 2278152, 1: 2278386, 11: 2278386, 15496: 2309593, 15498: 2318613, 15501: 2318991}
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | --------------------------------------------------
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | 
[2026-01-31 13:18:33] 2026-01-31 12:16:00,963 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-01-31 13:18:33] 2026-01-31 12:16:00,985 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,986 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,986 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,986 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,988 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 13:18:33] 2026-01-31 12:16:00,989 | INFO     | job 6987896117 has completed (purged errors)
[2026-01-31 13:18:33] 2026-01-31 12:16:00,989 | INFO     | overall cleanup function is called
[2026-01-31 13:18:33] 2026-01-31 12:16:01,997 | INFO     | --- collectZombieJob: --- 10, [2400851]
[2026-01-31 13:18:33] 2026-01-31 12:16:01,997 | INFO     | zombie collector waiting for pid 2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:01,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 13:18:33] 2026-01-31 12:16:01,998 | INFO     | collected zombie processes
[2026-01-31 13:18:33] 2026-01-31 12:16:01,998 | INFO     | will attempt to kill all subprocesses of pid=2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:02,350 | INFO     | process IDs to be killed: [2400851] (in reverse order)
[2026-01-31 13:18:33] 2026-01-31 12:16:02,432 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 13:18:33] 2026-01-31 12:16:02,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 13:18:33] 2026-01-31 12:16:02,444 | INFO     | did not find any defunct processes belonging to 2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:02,455 | INFO     | did not find any defunct processes belonging to 2400851
[2026-01-31 13:18:33] 2026-01-31 12:16:02,455 | INFO     | ready for new job
[2026-01-31 13:18:33] 2026-01-31 12:16:02,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 13:18:33] 2026-01-31 12:16:02,458 | INFO     | **************************************
[2026-01-31 13:18:33] 2026-01-31 12:16:02,459 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 13:18:33] 2026-01-31 12:16:02,459 | INFO     | **************************************
[2026-01-31 13:18:33] 2026-01-31 12:16:02,459 | INFO     | 
[2026-01-31 13:18:33] 2026-01-31 12:16:02,462 | INFO     | architecture information:
[2026-01-31 13:18:33] 2026-01-31 12:16:02,463 | INFO     | executing command: cat /etc/os-release
[2026-01-31 13:18:33] 2026-01-31 12:16:02,480 | INFO     | cat /etc/os-release:
[2026-01-31 13:18:33] NAME="CentOS Linux"
[2026-01-31 13:18:33] VERSION="7 (Core)"
[2026-01-31 13:18:33] ID="centos"
[2026-01-31 13:18:33] ID_LIKE="rhel fedora"
[2026-01-31 13:18:33] VERSION_ID="7"
[2026-01-31 13:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 13:18:33] ANSI_COLOR="0;31"
[2026-01-31 13:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 13:18:33] HOME_URL="https://www.centos.org/"
[2026-01-31 13:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 13:18:33] 
[2026-01-31 13:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 13:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 13:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 13:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 13:18:33] 
[2026-01-31 13:18:33] 2026-01-31 12:16:02,480 | INFO     | **************************************
[2026-01-31 13:18:33] 2026-01-31 12:16:02,983 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-01-31 13:18:33] 2026-01-31 12:16:03,000 | INFO     | sufficient remaining disk space (1661512712192 B)
[2026-01-31 13:18:33] 2026-01-31 12:16:03,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 13:18:33] 2026-01-31 12:16:03,001 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 13:18:33] 2026-01-31 12:16:03,001 | INFO     | update_server=False
[2026-01-31 13:18:33] 2026-01-31 12:16:03,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 13:18:33] 2026-01-31 12:16:03,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 13:18:33] 2026-01-31 12:16:03,395 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 13:18:33] 2026-01-31 12:16:03,396 | INFO     | aborting loop
[2026-01-31 13:18:33] 2026-01-31 12:16:03,724 | INFO     | all data control threads have been joined
[2026-01-31 13:18:33] 2026-01-31 12:16:03,937 | INFO     | all job control threads have been joined
[2026-01-31 13:18:33] 2026-01-31 12:16:04,007 | INFO     | [job] retrieve thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,176 | INFO     | [payload] validate_post thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,193 | INFO     | [payload] failed_post thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,330 | INFO     | all payload control threads have been joined
[2026-01-31 13:18:33] 2026-01-31 12:16:04,350 | INFO     | [data] copytool_in thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,401 | INFO     | [job] job monitor thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,728 | INFO     | [data] control thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,908 | INFO     | [job] validate thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:04,942 | INFO     | [job] control thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,016 | INFO     | [data] copytool_out thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,025 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,272 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,336 | INFO     | [payload] control thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,505 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:05,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 13:18:33] 2026-01-31 12:16:05,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 13:18:33] 2026-01-31 12:16:06,554 | INFO     | [job] queue monitor thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:09,703 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:13,910 | INFO     | job.realtimelogging is not enabled
[2026-01-31 13:18:33] 2026-01-31 12:16:14,916 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 13:18:33] 2026-01-31 12:16:34,397 | INFO     | PID=2396204 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 13:18:33] 2026-01-31 12:16:34,397 | INFO     | .. there are 2 such processes running
[2026-01-31 13:18:33] 2026-01-31 12:16:34,398 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 13:18:33] 2026-01-31 12:16:34,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 13:18:33] 2026-01-31 12:16:34,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 13:18:33] 2026-01-31 12:16:52,381 | INFO     | [monitor] cgroup control has ended
[2026-01-31 13:18:33] 2026-01-31 12:16:52,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23139408013120)>', '<ExcThread(monitor, started 23139164886784)>']
[2026-01-31 13:18:33] 2026-01-31 12:16:53,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 13:18:33] 2026-01-31 12:16:53,467 | INFO     | [monitor] control thread has ended
[2026-01-31 13:18:33] 2026-01-31 12:16:57,531 | INFO     | all workflow threads have been joined
[2026-01-31 13:18:33] 2026-01-31 12:16:57,531 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 13:18:33] 2026-01-31 12:16:57,531 | INFO     | traces error code: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:57,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 13:18:33] 2026-01-31 12:16:57,642 [wrapper] ==== pilot stdout END ====
[2026-01-31 13:18:33] 2026-01-31 12:16:57,645 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 13:18:33] 2026-01-31 12:16:57,647 [wrapper] pilotpid: 2396204
[2026-01-31 13:18:33] 2026-01-31 12:16:57,649 [wrapper] Pilot exit status: 0
[2026-01-31 13:18:33] 2026-01-31 12:16:57,660 [wrapper] pandaids: 6987896117
[2026-01-31 13:18:33] 2026-01-31 12:16:57,716 [wrapper] cleanup supervisor_pilot 2509505 2396205
[2026-01-31 13:18:33] 2026-01-31 12:16:57,718 [wrapper] Test setup, not cleaning
[2026-01-31 13:18:33] 2026-01-31 12:16:57,721 [wrapper] apfmon messages muted
[2026-01-31 13:18:33] 2026-01-31 12:16:57,723 [wrapper] ==== wrapper stdout END ====
[2026-01-31 13:18:33] 2026-01-31 12:16:57,725 [wrapper] ==== wrapper stderr END ====
[2026-01-31 13:18:33]  *** Error codes and diagnostics ***
[2026-01-31 13:18:33]     "exeErrorCode": 0,
[2026-01-31 13:18:33]     "exeErrorDiag": "",
[2026-01-31 13:18:33]     "pilotErrorCode": 0,
[2026-01-31 13:18:33]     "pilotErrorDiag": "",
[2026-01-31 13:18:33]  *** Listing of results directory ***
[2026-01-31 13:18:33] total 448448
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc    584422 Jan 30 19:43 pilot3.tar.gz
[2026-01-31 13:18:33] -rwx------ 1 boinc boinc     36322 Jan 30 19:44 runpilot2-wrapper.sh
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc      5111 Jan 30 19:44 queuedata.json
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc       100 Jan 31 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 13:18:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 08:57 run_atlas
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc       105 Jan 31 08:57 job.xml
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc      6425 Jan 31 08:57 init_data.xml
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc 268693524 Jan 31 08:57 EVNT.48329019._000005.pool.root.1
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc     15845 Jan 31 08:57 start_atlas.sh
[2026-01-31 13:18:33] drwxrwx--x 2 boinc boinc      4096 Jan 31 08:57 shared
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc    597782 Jan 31 08:57 input.tar.gz
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc         0 Jan 31 08:57 boinc_lockfile
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc      2614 Jan 31 08:57 pandaJob.out
[2026-01-31 13:18:33] -rw------- 1 boinc boinc   1010520 Jan 31 08:57 agis_schedconf.cvmfs.json
[2026-01-31 13:18:33] -rw------- 1 boinc boinc       446 Jan 31 08:57 workernode_map.json
[2026-01-31 13:18:33] drwx------ 5 boinc boinc      4096 Jan 31 08:57 pilot3
[2026-01-31 13:18:33] -rw------- 1 boinc boinc 181323738 Jan 31 13:15 HITS.48329021._000135.pool.root.1
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc       528 Jan 31 13:15 boinc_task_state.xml
[2026-01-31 13:18:33] -rw------- 1 boinc boinc      1051 Jan 31 13:15 memory_monitor_summary.json
[2026-01-31 13:18:33] -rw------- 1 boinc boinc   1511668 Jan 31 13:15 agis_ddmendpoints.agis.ALL.json
[2026-01-31 13:18:33] -rw------- 1 boinc boinc    422812 Jan 31 13:15 log.48329021._000135.job.log.tgz.1
[2026-01-31 13:18:33] -rw------- 1 boinc boinc      6403 Jan 31 13:16 heartbeat.json
[2026-01-31 13:18:33] -rw------- 1 boinc boinc        95 Jan 31 13:16 pilot_heartbeat.json
[2026-01-31 13:18:33] -rw------- 1 boinc boinc      4902 Jan 31 13:16 pilotlog.txt
[2026-01-31 13:18:33] -rw------- 1 boinc boinc   2201419 Jan 31 13:16 log.48329021._000135.job.log.1
[2026-01-31 13:18:33] -rw------- 1 boinc boinc       357 Jan 31 13:16 output.list
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc       620 Jan 31 13:16 runtime_log
[2026-01-31 13:18:33] -rw------- 1 boinc boinc   2641920 Jan 31 13:16 result.tar.gz
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc      9205 Jan 31 13:16 runtime_log.err
[2026-01-31 13:18:33] -rw------- 1 boinc boinc       666 Jan 31 13:16 fMiKDmqe858n9Rq4apOajLDm4fhM0noT9bVooX4SDmpgLKDmtArWnn.diag
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc        27 Jan 31 13:18 wrapper_checkpoint.txt
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc      8192 Jan 31 13:18 boinc_mmap_file
[2026-01-31 13:18:33] -rw-r--r-- 1 boinc boinc     20755 Jan 31 13:18 stderr.txt
[2026-01-31 13:18:33] HITS file was successfully produced:
[2026-01-31 13:18:33] -rw------- 1 boinc boinc 181323738 Jan 31 13:15 shared/HITS.pool.root.1
[2026-01-31 13:18:33]  *** Contents of shared directory: ***
[2026-01-31 13:18:33] total 442664
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc 268693524 Jan 31 08:57 ATLAS.root_0
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc     15845 Jan 31 08:57 start_atlas.sh
[2026-01-31 13:18:33] -rw-r--r-- 2 boinc boinc    597782 Jan 31 08:57 input.tar.gz
[2026-01-31 13:18:33] -rw------- 1 boinc boinc 181323738 Jan 31 13:15 HITS.pool.root.1
[2026-01-31 13:18:33] -rw------- 1 boinc boinc   2641920 Jan 31 13:16 result.tar.gz
13:18:35 (2392190): run_atlas exited; CPU time 60262.252977
13:18:35 (2392190): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN