Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:35:48 (171583): wrapper (7.7.26015): starting
23:35:48 (171583): wrapper: running run_atlas (--nthreads 8)
[2026-01-30 23:35:48] Arguments: --nthreads 8
[2026-01-30 23:35:48] Threads: 8
[2026-01-30 23:35:48] Checking for CVMFS
[2026-01-30 23:35:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 23:35:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 23:35:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 23:35:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 23:35:52] 2.13.3.0 15733 123179 658100 155702 3 274 26940392 32935936 18151 16776704 0 577451262 99.671 473191802 27563 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-30 23:35:52] CVMFS is ok
[2026-01-30 23:35:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 23:35:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 23:35:52] Further information can be found at the LHC@home message board.
[2026-01-30 23:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 23:35:52] Checking for apptainer binary...
[2026-01-30 23:35:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 23:35:52] Running /usr/bin/apptainer --version
[2026-01-30 23:35:53] apptainer version 1.4.5-2.el9
[2026-01-30 23:35:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 23:35:54] c-8-39.aglt2.org
[2026-01-30 23:35:54] apptainer works
[2026-01-30 23:35:54] Set ATHENA_PROC_NUMBER=8
[2026-01-30 23:35:54] Set ATHENA_CORE_NUMBER=8
[2026-01-30 23:35:54] Starting ATLAS job with PandaID=6993978451
[2026-01-30 23:35:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 15:24:04]  *** The last 200 lines of the pilot log: ***
[2026-01-31 15:24:04] 2026-01-31 20:23:03,600 | INFO     | job 6993978451 has state=finished
[2026-01-31 15:24:04] 2026-01-31 20:23:03,600 | INFO     | preparing for final server update for job 6993978451 in state='finished'
[2026-01-31 15:24:04] 2026-01-31 20:23:03,600 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6993978451/jobReport.json
[2026-01-31 15:24:04] 2026-01-31 20:23:03,604 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-31 15:24:04] 2026-01-31 20:23:03,605 | INFO     | this job has now completed (state=finished)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,605 | INFO     | log transfer has been attempted: DONE
[2026-01-31 15:24:04] 2026-01-31 20:23:03,605 | INFO     | job 6993978451 has finished - writing final server update
[2026-01-31 15:24:04] 2026-01-31 20:23:03,606 | INFO     | total number of processed events: 400 (read)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,615 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6993978451/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,616 | INFO     | extracted standard info from prmon json
[2026-01-31 15:24:04] 2026-01-31 20:23:03,616 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 15:24:04] 2026-01-31 20:23:03,616 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 15:24:04] 2026-01-31 20:23:03,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 15:24:04] 2026-01-31 20:23:03,617 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 15:24:04] 2026-01-31 20:23:03,633 | INFO     | fitting pss+swap vs Time
[2026-01-31 15:24:04] 2026-01-31 20:23:03,634 | INFO     | sum of square deviations: 247812980867.01712
[2026-01-31 15:24:04] 2026-01-31 20:23:03,700 | INFO     | sum of deviations: 351747938790.9658
[2026-01-31 15:24:04] 2026-01-31 20:23:03,700 | INFO     | mean x: 1769862664.4267242
[2026-01-31 15:24:04] 2026-01-31 20:23:03,700 | INFO     | mean y: 2506287.146551724
[2026-01-31 15:24:04] 2026-01-31 20:23:03,701 | INFO     | intersect: -2509652446.335054
[2026-01-31 15:24:04] 2026-01-31 20:23:03,702 | INFO     | chi2: 2.9839007735088154
[2026-01-31 15:24:04] 2026-01-31 20:23:03,703 | INFO     | sum of square deviations: 243828979608.1367
[2026-01-31 15:24:04] 2026-01-31 20:23:03,756 | INFO     | sum of deviations: 405362420331.0076
[2026-01-31 15:24:04] 2026-01-31 20:23:03,756 | INFO     | mean x: 1769862511.9274106
[2026-01-31 15:24:04] 2026-01-31 20:23:03,757 | INFO     | mean y: 2508329.8060671724
[2026-01-31 15:24:04] 2026-01-31 20:23:03,757 | INFO     | intersect: -2939864445.7393994
[2026-01-31 15:24:04] 2026-01-31 20:23:03,758 | INFO     | chi2: 2.2951250799326797
[2026-01-31 15:24:04] 2026-01-31 20:23:03,758 | INFO     | current chi2=2.2951250799326797 (change=23.08306293865777 %)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,758 | INFO     | right removable region: 922
[2026-01-31 15:24:04] 2026-01-31 20:23:03,760 | INFO     | sum of square deviations: 243828737437.56223
[2026-01-31 15:24:04] 2026-01-31 20:23:03,806 | INFO     | sum of deviations: 137376352341.44522
[2026-01-31 15:24:04] 2026-01-31 20:23:03,807 | INFO     | mean x: 1769862816.930661
[2026-01-31 15:24:04] 2026-01-31 20:23:03,807 | INFO     | mean y: 2514481.991332611
[2026-01-31 15:24:04] 2026-01-31 20:23:03,807 | INFO     | intersect: -994649759.1471835
[2026-01-31 15:24:04] 2026-01-31 20:23:03,808 | INFO     | chi2: 0.8239698117172632
[2026-01-31 15:24:04] 2026-01-31 20:23:03,809 | INFO     | current chi2=0.8239698117172632 (change=72.38615241389732 %)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,810 | INFO     | sum of square deviations: 239887368985.70822
[2026-01-31 15:24:04] 2026-01-31 20:23:03,873 | INFO     | sum of deviations: 102157382715.49023
[2026-01-31 15:24:04] 2026-01-31 20:23:03,874 | INFO     | mean x: 1769862969.4357297
[2026-01-31 15:24:04] 2026-01-31 20:23:03,874 | INFO     | mean y: 2515843.18627451
[2026-01-31 15:24:04] 2026-01-31 20:23:03,874 | INFO     | intersect: -751190237.6594895
[2026-01-31 15:24:04] 2026-01-31 20:23:03,875 | INFO     | chi2: 0.7728968581950357
[2026-01-31 15:24:04] 2026-01-31 20:23:03,875 | INFO     | current chi2=0.7728968581950357 (change=6.198401057410666 %)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,875 | INFO     | left removable region: 20
[2026-01-31 15:24:04] 2026-01-31 20:23:03,877 | INFO     | sum of square deviations: 227561574226.26678
[2026-01-31 15:24:04] 2026-01-31 20:23:03,901 | INFO     | sum of deviations: 156811038685.5066
[2026-01-31 15:24:04] 2026-01-31 20:23:03,902 | INFO     | mean x: 1769863091.440133
[2026-01-31 15:24:04] 2026-01-31 20:23:03,902 | INFO     | mean y: 2517921.4445676273
[2026-01-31 15:24:04] 2026-01-31 20:23:03,902 | INFO     | intersect: -1217081963.3053684
[2026-01-31 15:24:04] 2026-01-31 20:23:03,903 | INFO     | chi2: 0.06982035037239093
[2026-01-31 15:24:04] 2026-01-31 20:23:03,904 | INFO     | current memory leak: 0.69 B/s (using 902 data points, chi2=0.07)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,905 | INFO     | could have reported an average CPU frequency of 2700 MHz (35 samples)
[2026-01-31 15:24:04] 2026-01-31 20:23:03,905 | INFO     | ..............................
[2026-01-31 15:24:04] 2026-01-31 20:23:03,905 | INFO     | . Timing measurements:
[2026-01-31 15:24:04] 2026-01-31 20:23:03,905 | INFO     | . get job = 1 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,905 | INFO     | . initial setup = 44 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,909 | INFO     | . payload setup = 57 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,909 | INFO     | . stage-in = 0 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,910 | INFO     | . payload execution = 56611 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,910 | INFO     | . stage-out = 9 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,910 | INFO     | . log creation = 2 s
[2026-01-31 15:24:04] 2026-01-31 20:23:03,910 | INFO     | ..............................
[2026-01-31 15:24:04] 2026-01-31 20:23:04,789 | INFO     | 
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | job summary report
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | --------------------------------------------------
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | PanDA job id: 6993978451
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | task id: 48317931
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | errors: (none)
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | pilot state: finished 
[2026-01-31 15:24:04] 2026-01-31 20:23:04,790 | INFO     | transexitcode: 0
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | exeerrorcode: 0
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | exeerrordiag: 
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | exitcode: 0
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | exitmsg: OK
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | cpuconsumptiontime: 54671 s
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | nevents: 400
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | neventsw: 0
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | pid: 191934
[2026-01-31 15:24:04] 2026-01-31 20:23:04,791 | INFO     | pgrp: 191934
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | corecount: 8
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | event service: False
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | sizes: {0: 2277120, 1: 2277721, 2: 2259630, 3: 2278294, 14: 2278294, 56673: 2326612, 56674: 2326767, 56684: 2335821, 56687: 2335877, 56691: 2336071}
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | --------------------------------------------------
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | 
[2026-01-31 15:24:04] 2026-01-31 20:23:04,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-31 15:24:04] 2026-01-31 20:23:04,862 | INFO     | PID=182525 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 15:24:04] 2026-01-31 20:23:04,863 | INFO     | .. there are 38 such processes running
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,896 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,897 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,898 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 15:24:04] 2026-01-31 20:23:04,899 | INFO     | job 6993978451 has completed (purged errors)
[2026-01-31 15:24:04] 2026-01-31 20:23:04,899 | INFO     | overall cleanup function is called
[2026-01-31 15:24:04] 2026-01-31 20:23:05,937 | INFO     | --- collectZombieJob: --- 10, [191934]
[2026-01-31 15:24:04] 2026-01-31 20:23:05,938 | INFO     | zombie collector waiting for pid 191934
[2026-01-31 15:24:04] 2026-01-31 20:23:05,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 15:24:04] 2026-01-31 20:23:05,938 | INFO     | collected zombie processes
[2026-01-31 15:24:04] 2026-01-31 20:23:05,938 | INFO     | will attempt to kill all subprocesses of pid=191934
[2026-01-31 15:24:04] 2026-01-31 20:23:10,315 | INFO     | process IDs to be killed: [191934] (in reverse order)
[2026-01-31 15:24:04] 2026-01-31 20:23:11,640 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 15:24:04] 2026-01-31 20:23:11,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 15:24:04] 2026-01-31 20:23:11,761 | INFO     | did not find any defunct processes belonging to 191934
[2026-01-31 15:24:04] 2026-01-31 20:23:11,891 | INFO     | did not find any defunct processes belonging to 191934
[2026-01-31 15:24:04] 2026-01-31 20:23:11,892 | INFO     | ready for new job
[2026-01-31 15:24:04] 2026-01-31 20:23:11,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 15:24:04] 2026-01-31 20:23:11,923 | INFO     | **************************************
[2026-01-31 15:24:04] 2026-01-31 20:23:11,924 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 15:24:04] 2026-01-31 20:23:11,924 | INFO     | **************************************
[2026-01-31 15:24:04] 2026-01-31 20:23:11,924 | INFO     | 
[2026-01-31 15:24:04] 2026-01-31 20:23:11,928 | INFO     | architecture information:
[2026-01-31 15:24:04] 2026-01-31 20:23:11,937 | INFO     | executing command: cat /etc/os-release
[2026-01-31 15:24:04] 2026-01-31 20:23:12,090 | INFO     | cat /etc/os-release:
[2026-01-31 15:24:04] NAME="CentOS Linux"
[2026-01-31 15:24:04] VERSION="7 (Core)"
[2026-01-31 15:24:04] ID="centos"
[2026-01-31 15:24:04] ID_LIKE="rhel fedora"
[2026-01-31 15:24:04] VERSION_ID="7"
[2026-01-31 15:24:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 15:24:04] ANSI_COLOR="0;31"
[2026-01-31 15:24:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 15:24:04] HOME_URL="https://www.centos.org/"
[2026-01-31 15:24:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 15:24:04] 
[2026-01-31 15:24:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 15:24:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 15:24:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 15:24:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 15:24:04] 
[2026-01-31 15:24:04] 2026-01-31 20:23:12,090 | INFO     | **************************************
[2026-01-31 15:24:04] 2026-01-31 20:23:12,593 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-31 15:24:04] 2026-01-31 20:23:12,693 | INFO     | sufficient remaining disk space (70334283776 B)
[2026-01-31 15:24:04] 2026-01-31 20:23:12,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 15:24:04] 2026-01-31 20:23:12,693 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 15:24:04] 2026-01-31 20:23:12,694 | INFO     | update_server=False
[2026-01-31 15:24:04] 2026-01-31 20:23:12,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 15:24:04] 2026-01-31 20:23:12,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 15:24:04] 2026-01-31 20:23:12,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:24:04] 2026-01-31 20:23:12,915 | INFO     | aborting loop
[2026-01-31 15:24:04] 2026-01-31 20:23:13,045 | INFO     | all data control threads have been joined
[2026-01-31 15:24:04] 2026-01-31 20:23:13,693 | INFO     | all payload control threads have been joined
[2026-01-31 15:24:04] 2026-01-31 20:23:13,699 | INFO     | [job] retrieve thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:13,920 | INFO     | [job] job monitor thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 15:24:04] 2026-01-31 20:23:14,051 | INFO     | [data] control thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,062 | INFO     | [data] copytool_in thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 15:24:04] 2026-01-31 20:23:14,096 | INFO     | [job] validate thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,175 | INFO     | all job control threads have been joined
[2026-01-31 15:24:04] 2026-01-31 20:23:14,267 | INFO     | [payload] failed_post thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,380 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,381 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,383 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,640 | INFO     | [payload] validate_post thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,711 | INFO     | [payload] control thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:14,946 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:15,011 | INFO     | [job] queue monitor thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:15,181 | INFO     | [job] control thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:16,098 | INFO     | [data] copytool_out thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:16,705 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 15:24:04] 2026-01-31 20:23:44,604 | INFO     | PID=182525 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 15:24:04] 2026-01-31 20:23:44,604 | INFO     | .. there are 38 such processes running
[2026-01-31 15:24:04] 2026-01-31 20:23:44,644 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 15:24:04] 2026-01-31 20:23:44,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 15:24:04] 2026-01-31 20:23:44,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 15:24:04] 2026-01-31 20:23:54,680 | INFO     | [monitor] cgroup control has ended
[2026-01-31 15:24:04] 2026-01-31 20:23:55,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139859129022272)>', '<ExcThread(monitor, started 139858848003840)>']
[2026-01-31 15:24:04] 2026-01-31 20:23:56,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 15:24:04] 2026-01-31 20:23:56,717 | INFO     | [monitor] control thread has ended
[2026-01-31 15:24:04] 2026-01-31 20:24:00,867 | INFO     | all workflow threads have been joined
[2026-01-31 15:24:04] 2026-01-31 20:24:00,868 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 15:24:04] 2026-01-31 20:24:00,868 | INFO     | traces error code: 0
[2026-01-31 15:24:04] 2026-01-31 20:24:00,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 15:24:04] 2026-01-31 20:24:02,343 [wrapper] ==== pilot stdout END ====
[2026-01-31 15:24:04] 2026-01-31 20:24:02,346 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 15:24:04] 2026-01-31 20:24:02,349 [wrapper] pilotpid: 182525
[2026-01-31 15:24:04] 2026-01-31 20:24:02,352 [wrapper] Pilot exit status: 0
[2026-01-31 15:24:04] 2026-01-31 20:24:02,494 [wrapper] pandaids: 6993978451
[2026-01-31 15:24:04] 2026-01-31 20:24:03,445 [wrapper] cleanup supervisor_pilot 3034429 182526
[2026-01-31 15:24:04] 2026-01-31 20:24:03,461 [wrapper] Test setup, not cleaning
[2026-01-31 15:24:04] 2026-01-31 20:24:03,511 [wrapper] apfmon messages muted
[2026-01-31 15:24:04] 2026-01-31 20:24:03,541 [wrapper] ==== wrapper stdout END ====
[2026-01-31 15:24:04] 2026-01-31 20:24:03,556 [wrapper] ==== wrapper stderr END ====
[2026-01-31 15:24:04]  *** Error codes and diagnostics ***
[2026-01-31 15:24:04]     "exeErrorCode": 0,
[2026-01-31 15:24:04]     "exeErrorDiag": "",
[2026-01-31 15:24:04]     "pilotErrorCode": 0,
[2026-01-31 15:24:04]     "pilotErrorDiag": "",
[2026-01-31 15:24:04]  *** Listing of results directory ***
[2026-01-31 15:24:04] total 676444
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 15:39 queuedata.json
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 15:39 pilot3.tar.gz
[2026-01-31 15:24:04] -rwx------. 1 boincer umatlas     36322 Jan 30 15:39 runpilot2-wrapper.sh
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas       100 Jan 30 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 15:24:04] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 30 23:35 run_atlas
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas       105 Jan 30 23:35 job.xml
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas 491261893 Jan 30 23:35 EVNT.48317929._000115.pool.root.1
[2026-01-31 15:24:04] drwxrwx--x. 2 boincer umatlas      4096 Jan 30 23:35 shared
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas    597758 Jan 30 23:35 input.tar.gz
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas     15845 Jan 30 23:35 start_atlas.sh
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas         0 Jan 30 23:35 boinc_lockfile
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas      2511 Jan 30 23:35 pandaJob.out
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas        57 Jan 30 23:35 setup.sh.local
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas   1010520 Jan 30 23:37 agis_schedconf.cvmfs.json
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas       439 Jan 30 23:37 workernode_map.json
[2026-01-31 15:24:04] drwx------. 5 boincer umatlas      4096 Jan 30 23:38 pilot3
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas      6612 Jan 31 15:20 init_data.xml
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas 184260760 Jan 31 15:21 HITS.48317931._006658.pool.root.1
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas       531 Jan 31 15:21 boinc_task_state.xml
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas      1043 Jan 31 15:22 memory_monitor_summary.json
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas   1511668 Jan 31 15:22 agis_ddmendpoints.agis.ALL.json
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas        95 Jan 31 15:22 pilot_heartbeat.json
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas    884282 Jan 31 15:22 log.48317931._006658.job.log.tgz.1
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas      6385 Jan 31 15:23 heartbeat.json
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas      4819 Jan 31 15:24 pilotlog.txt
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas      8192 Jan 31 15:24 boinc_mmap_file
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas        28 Jan 31 15:24 wrapper_checkpoint.txt
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas   5725743 Jan 31 15:24 log.48317931._006658.job.log.1
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas       357 Jan 31 15:24 output.list
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas       620 Jan 31 15:24 runtime_log
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas   6625280 Jan 31 15:24 result.tar.gz
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas       656 Jan 31 15:24 abaKDmYSA68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm45LKDm3N9omn.diag
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas      9332 Jan 31 15:24 runtime_log.err
[2026-01-31 15:24:04] -rw-r--r--. 1 boincer umatlas     21442 Jan 31 15:24 stderr.txt
[2026-01-31 15:24:04] HITS file was successfully produced:
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas 184260760 Jan 31 15:21 shared/HITS.pool.root.1
[2026-01-31 15:24:04]  *** Contents of shared directory: ***
[2026-01-31 15:24:04] total 666768
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas 491261893 Jan 30 23:35 ATLAS.root_0
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas    597758 Jan 30 23:35 input.tar.gz
[2026-01-31 15:24:04] -rw-r--r--. 2 boincer umatlas     15845 Jan 30 23:35 start_atlas.sh
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas 184260760 Jan 31 15:21 HITS.pool.root.1
[2026-01-31 15:24:04] -rw-------. 1 boincer umatlas   6625280 Jan 31 15:24 result.tar.gz
15:24:06 (171583): run_atlas exited; CPU time 57288.168086
15:24:06 (171583): called boinc_finish(0)

</stderr_txt>
]]>

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