Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:36:10 (24618): wrapper (7.7.26015): starting
10:36:10 (24618): wrapper: running run_atlas (--nthreads 3)
[2026-01-31 10:36:10] Arguments: --nthreads 3
[2026-01-31 10:36:10] Threads: 3
[2026-01-31 10:36:10] Checking for CVMFS
[2026-01-31 10:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 10:36:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 10:36:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 10:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 10:36:11] 2.9.2.0 3657336 3955 77616 155708 0 49 35039177 36864001 0 130560 0 1568752 99.985 118468 10282 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-31 10:36:11] CVMFS is ok
[2026-01-31 10:36:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 10:36:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 10:36:11] Further information can be found at the LHC@home message board.
[2026-01-31 10:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 10:36:11] Checking for apptainer binary...
[2026-01-31 10:36:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 10:36:11] Running /usr/bin/apptainer --version
[2026-01-31 10:36:11] apptainer version 1.4.1-1.1
[2026-01-31 10:36:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 10:36:11] atlasA212
[2026-01-31 10:36:11] apptainer works
[2026-01-31 10:36:11] Set ATHENA_PROC_NUMBER=3
[2026-01-31 10:36:11] Set ATHENA_CORE_NUMBER=3
[2026-01-31 10:36:11] Starting ATLAS job with PandaID=6986364702
[2026-01-31 10:36:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 12:24:37]  *** The last 200 lines of the pilot log: ***
[2026-01-31 12:24:37] 2026-01-31 11:23:40,312 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,312 | INFO     | log transfer has been attempted: DONE
[2026-01-31 12:24:37] 2026-01-31 11:23:40,313 | INFO     | job 6986364702 has finished - writing final server update
[2026-01-31 12:24:37] 2026-01-31 11:23:40,313 | INFO     | total number of processed events: 400 (read)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6986364702/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | INFO     | extracted standard info from prmon json
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 12:24:37] 2026-01-31 11:23:40,314 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 12:24:37] 2026-01-31 11:23:40,315 | INFO     | fitting pss+swap vs Time
[2026-01-31 12:24:37] 2026-01-31 11:23:40,315 | INFO     | sum of square deviations: 369281342.5
[2026-01-31 12:24:37] 2026-01-31 11:23:40,315 | INFO     | sum of deviations: -18672059526.499996
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | mean x: 1769855402.5
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | mean y: 2404123.650943396
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | intersect: 89492019832.51283
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | chi2: 2.373440484669268
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | sum of square deviations: 319447850.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | sum of deviations: -11304488707.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | mean x: 1769855250.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | mean y: 2425979.9801980196
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | intersect: 62633333299.12372
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | chi2: 1.7498071626864935
[2026-01-31 12:24:37] 2026-01-31 11:23:40,316 | INFO     | current chi2=1.7498071626864935 (change=26.275498627877997 %)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | sum of square deviations: 274312120.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | sum of deviations: -9998031332.999998
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | mean x: 1769855097.5
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | mean y: 2430397.6666666665
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | intersect: 64509484331.97611
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | chi2: 1.746865013973127
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | current chi2=1.746865013973127 (change=0.16814131157455114 %)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | right removable region: 95
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | sum of square deviations: 319447850.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | sum of deviations: -31838702218.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | mean x: 1769855555.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | mean y: 2443231.574257426
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | intersect: 176400262107.2315
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | chi2: 0.8772416055225458
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | current chi2=0.8772416055225458 (change=63.039241506627164 %)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,317 | INFO     | sum of square deviations: 274312120.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | sum of deviations: -27522089495.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | mean x: 1769855707.5
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | mean y: 2428622.5625
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | intersect: 177574338952.48718
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | chi2: 0.8777891000419826
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | current chi2=0.8777891000419826 (change=-0.062410915760280544 %)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | left removable region: 20
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | sum of square deviations: 130793150.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | sum of deviations: -11334485213.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | mean x: 1769855677.0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | mean y: 2424879.6266666665
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | intersect: 153377452548.1292
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | chi2: 0.18228856926722964
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | current memory leak: -86.66 B/s (using 75 data points, chi2=0.18)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,318 | INFO     | could have reported an average CPU frequency of 4441 MHz (7 samples)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | ..............................
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . Timing measurements:
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . get job = 0 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . initial setup = 4 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . payload setup = 3 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . stage-in = 0 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . payload execution = 6415 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . stage-out = 0 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | . log creation = 0 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,319 | INFO     | ..............................
[2026-01-31 12:24:37] 2026-01-31 11:23:40,350 | INFO     | 
[2026-01-31 12:24:37] 2026-01-31 11:23:40,350 | INFO     | job summary report
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | --------------------------------------------------
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | PanDA job id: 6986364702
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | task id: 48318026
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | errors: (none)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | pilot state: finished 
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | transexitcode: 0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | exeerrorcode: 0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | exeerrordiag: 
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | exitcode: 0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | exitmsg: OK
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | cpuconsumptiontime: 18574 s
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | nevents: 400
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | neventsw: 0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | pid: 33071
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | pgrp: 33071
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | corecount: 3
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | event service: False
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | sizes: {0: 2278268, 11: 2278268, 6422: 2305441, 6423: 2314445, 6425: 2314501, 6427: 2314695}
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | --------------------------------------------------
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | 
[2026-01-31 12:24:37] 2026-01-31 11:23:40,351 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | job 6986364702 has completed (purged errors)
[2026-01-31 12:24:37] 2026-01-31 11:23:40,368 | INFO     | overall cleanup function is called
[2026-01-31 12:24:37] 2026-01-31 11:23:41,374 | INFO     | --- collectZombieJob: --- 10, [33071]
[2026-01-31 12:24:37] 2026-01-31 11:23:41,374 | INFO     | zombie collector waiting for pid 33071
[2026-01-31 12:24:37] 2026-01-31 11:23:41,374 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 12:24:37] 2026-01-31 11:23:41,374 | INFO     | collected zombie processes
[2026-01-31 12:24:37] 2026-01-31 11:23:41,374 | INFO     | will attempt to kill all subprocesses of pid=33071
[2026-01-31 12:24:37] 2026-01-31 11:23:41,432 | INFO     | process IDs to be killed: [33071] (in reverse order)
[2026-01-31 12:24:37] 2026-01-31 11:23:41,464 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 12:24:37] 2026-01-31 11:23:41,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 12:24:37] 2026-01-31 11:23:41,467 | INFO     | did not find any defunct processes belonging to 33071
[2026-01-31 12:24:37] 2026-01-31 11:23:41,468 | INFO     | did not find any defunct processes belonging to 33071
[2026-01-31 12:24:37] 2026-01-31 11:23:41,469 | INFO     | ready for new job
[2026-01-31 12:24:37] 2026-01-31 11:23:41,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 12:24:37] 2026-01-31 11:23:41,469 | INFO     | **************************************
[2026-01-31 12:24:37] 2026-01-31 11:23:41,469 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 12:24:37] 2026-01-31 11:23:41,469 | INFO     | **************************************
[2026-01-31 12:24:37] 2026-01-31 11:23:41,470 | INFO     | 
[2026-01-31 12:24:37] 2026-01-31 11:23:41,470 | INFO     | architecture information:
[2026-01-31 12:24:37] 2026-01-31 11:23:41,470 | INFO     | executing command: cat /etc/os-release
[2026-01-31 12:24:37] 2026-01-31 11:23:41,482 | INFO     | cat /etc/os-release:
[2026-01-31 12:24:37] NAME="CentOS Linux"
[2026-01-31 12:24:37] VERSION="7 (Core)"
[2026-01-31 12:24:37] ID="centos"
[2026-01-31 12:24:37] ID_LIKE="rhel fedora"
[2026-01-31 12:24:37] VERSION_ID="7"
[2026-01-31 12:24:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 12:24:37] ANSI_COLOR="0;31"
[2026-01-31 12:24:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 12:24:37] HOME_URL="https://www.centos.org/"
[2026-01-31 12:24:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 12:24:37] 
[2026-01-31 12:24:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 12:24:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 12:24:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 12:24:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 12:24:37] 
[2026-01-31 12:24:37] 2026-01-31 11:23:41,482 | INFO     | **************************************
[2026-01-31 12:24:37] 2026-01-31 11:23:41,984 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-31 12:24:37] 2026-01-31 11:23:41,996 | INFO     | sufficient remaining disk space (367427321856 B)
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | INFO     | update_server=False
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 12:24:37] 2026-01-31 11:23:41,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 12:24:37] 2026-01-31 11:23:42,092 | INFO     | all data control threads have been joined
[2026-01-31 12:24:37] 2026-01-31 11:23:42,221 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 12:24:37] 2026-01-31 11:23:42,221 | INFO     | aborting loop
[2026-01-31 12:24:37] 2026-01-31 11:23:42,817 | INFO     | all payload control threads have been joined
[2026-01-31 12:24:37] 2026-01-31 11:23:43,001 | INFO     | [job] retrieve thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,002 | INFO     | [job] queue monitor thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,097 | INFO     | [data] control thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,192 | INFO     | all job control threads have been joined
[2026-01-31 12:24:37] 2026-01-31 11:23:43,226 | INFO     | [job] job monitor thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,259 | INFO     | [payload] failed_post thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,527 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,740 | INFO     | [job] validate thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,822 | INFO     | [payload] control thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:43,890 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:44,002 | INFO     | [data] copytool_out thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:44,007 | INFO     | [data] copytool_in thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:44,065 | INFO     | [payload] validate_post thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:44,197 | INFO     | [job] control thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:44,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 12:24:37] 2026-01-31 11:23:48,282 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:23:52,492 | INFO     | job.realtimelogging is not enabled
[2026-01-31 12:24:37] 2026-01-31 11:23:53,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 12:24:37] 2026-01-31 11:24:12,197 | INFO     | PID=28651 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 12:24:37] 2026-01-31 11:24:12,198 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 12:24:37] 2026-01-31 11:24:12,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 12:24:37] 2026-01-31 11:24:12,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 12:24:37] 2026-01-31 11:24:31,742 | INFO     | [monitor] cgroup control has ended
[2026-01-31 12:24:37] 2026-01-31 11:24:32,218 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830301382464)>', '<ExcThread(monitor, started 139829195024128)>']
[2026-01-31 12:24:37] 2026-01-31 11:24:32,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 12:24:37] 2026-01-31 11:24:32,298 | INFO     | [monitor] control thread has ended
[2026-01-31 12:24:37] 2026-01-31 11:24:37,243 | INFO     | all workflow threads have been joined
[2026-01-31 12:24:37] 2026-01-31 11:24:37,243 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 12:24:37] 2026-01-31 11:24:37,243 | INFO     | traces error code: 0
[2026-01-31 12:24:37] 2026-01-31 11:24:37,243 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 12:24:37] 2026-01-31 11:24:37,309 [wrapper] ==== pilot stdout END ====
[2026-01-31 12:24:37] 2026-01-31 11:24:37,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 12:24:37] 2026-01-31 11:24:37,314 [wrapper] pilotpid: 28651
[2026-01-31 12:24:37] 2026-01-31 11:24:37,317 [wrapper] Pilot exit status: 0
[2026-01-31 12:24:37] 2026-01-31 11:24:37,327 [wrapper] pandaids: 6986364702
[2026-01-31 12:24:37] 2026-01-31 11:24:37,349 [wrapper] cleanup supervisor_pilot   39049 28652
[2026-01-31 12:24:37] 2026-01-31 11:24:37,352 [wrapper] Test setup, not cleaning
[2026-01-31 12:24:37] 2026-01-31 11:24:37,355 [wrapper] apfmon messages muted
[2026-01-31 12:24:37] 2026-01-31 11:24:37,358 [wrapper] ==== wrapper stdout END ====
[2026-01-31 12:24:37] 2026-01-31 11:24:37,361 [wrapper] ==== wrapper stderr END ====
[2026-01-31 12:24:37]  *** Error codes and diagnostics ***
[2026-01-31 12:24:37]     "exeErrorCode": 0,
[2026-01-31 12:24:37]     "exeErrorDiag": "",
[2026-01-31 12:24:37]     "pilotErrorCode": 0,
[2026-01-31 12:24:37]     "pilotErrorDiag": "",
[2026-01-31 12:24:37]  *** Listing of results directory ***
[2026-01-31 12:24:37] total 721560
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc    584422 Jan 30 17:41 pilot3.tar.gz
[2026-01-31 12:24:37] -rwx------ 1 boinc boinc     36322 Jan 30 17:43 runpilot2-wrapper.sh
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc      5111 Jan 30 17:44 queuedata.json
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc       100 Jan 31 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 12:24:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 10:36 run_atlas
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc       105 Jan 31 10:36 job.xml
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc 533178896 Jan 31 10:36 EVNT.48318024._000039.pool.root.1
[2026-01-31 12:24:37] drwxrwx--x 2 boinc boinc      4096 Jan 31 10:36 shared
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc    597770 Jan 31 10:36 input.tar.gz
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc     15845 Jan 31 10:36 start_atlas.sh
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc         0 Jan 31 10:36 boinc_setup_complete
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc      6448 Jan 31 10:36 init_data.xml
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc         0 Jan 31 10:36 boinc_lockfile
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc      2524 Jan 31 10:36 pandaJob.out
[2026-01-31 12:24:37] -rw------- 1 boinc boinc   1010520 Jan 31 10:36 agis_schedconf.cvmfs.json
[2026-01-31 12:24:37] -rw------- 1 boinc boinc   1511668 Jan 31 10:36 agis_ddmendpoints.agis.ALL.json
[2026-01-31 12:24:37] -rw------- 1 boinc boinc       426 Jan 31 10:36 workernode_map.json
[2026-01-31 12:24:37] drwx------ 5 boinc boinc      4096 Jan 31 10:36 pilot3
[2026-01-31 12:24:37] -rw------- 1 boinc boinc 199266773 Jan 31 12:23 HITS.48318026._001924.pool.root.1
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc       530 Jan 31 12:23 boinc_task_state.xml
[2026-01-31 12:24:37] -rw------- 1 boinc boinc      1016 Jan 31 12:23 memory_monitor_summary.json
[2026-01-31 12:24:37] -rw------- 1 boinc boinc    316714 Jan 31 12:23 log.48318026._001924.job.log.tgz.1
[2026-01-31 12:24:37] -rw------- 1 boinc boinc      6308 Jan 31 12:23 heartbeat.json
[2026-01-31 12:24:37] -rw------- 1 boinc boinc        95 Jan 31 12:24 pilot_heartbeat.json
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc        27 Jan 31 12:24 wrapper_checkpoint.txt
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc      8192 Jan 31 12:24 boinc_mmap_file
[2026-01-31 12:24:37] -rw------- 1 boinc boinc      4818 Jan 31 12:24 pilotlog.txt
[2026-01-31 12:24:37] -rw------- 1 boinc boinc    927474 Jan 31 12:24 log.48318026._001924.job.log.1
[2026-01-31 12:24:37] -rw------- 1 boinc boinc       357 Jan 31 12:24 output.list
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc       620 Jan 31 12:24 runtime_log
[2026-01-31 12:24:37] -rw------- 1 boinc boinc   1259520 Jan 31 12:24 result.tar.gz
[2026-01-31 12:24:37] -rw------- 1 boinc boinc       662 Jan 31 12:24 tUTMDmhl658nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIlLKDmmOlxVn.diag
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc      8911 Jan 31 12:24 runtime_log.err
[2026-01-31 12:24:37] -rw-r--r-- 1 boinc boinc     20992 Jan 31 12:24 stderr.txt
[2026-01-31 12:24:37] HITS file was successfully produced:
[2026-01-31 12:24:37] -rw------- 1 boinc boinc 199266773 Jan 31 12:23 shared/HITS.pool.root.1
[2026-01-31 12:24:37]  *** Contents of shared directory: ***
[2026-01-31 12:24:37] total 717124
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc 533178896 Jan 31 10:36 ATLAS.root_0
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc    597770 Jan 31 10:36 input.tar.gz
[2026-01-31 12:24:37] -rw-r--r-- 2 boinc boinc     15845 Jan 31 10:36 start_atlas.sh
[2026-01-31 12:24:37] -rw------- 1 boinc boinc 199266773 Jan 31 12:23 HITS.pool.root.1
[2026-01-31 12:24:37] -rw------- 1 boinc boinc   1259520 Jan 31 12:24 result.tar.gz
12:24:39 (24618): run_atlas exited; CPU time 18605.896912
12:24:39 (24618): called boinc_finish(0)

</stderr_txt>
]]>

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