Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:49:24 (95317): wrapper (7.7.26015): starting
04:49:24 (95317): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 04:49:24] Arguments: --nthreads 12
[2026-01-31 04:49:24] Threads: 12
[2026-01-31 04:49:24] Checking for CVMFS
[2026-01-31 04:49:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 04:49:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 04:49:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 04:49:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 04:49:25] 2.13.3.0 2948017 3603 80972 155700 1 50 2566801 4097024 922 130560 0 3165322 99.849 465381 20216 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-31 04:49:25] CVMFS is ok
[2026-01-31 04:49:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 04:49:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 04:49:25] Further information can be found at the LHC@home message board.
[2026-01-31 04:49:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 04:49:25] Checking for apptainer binary...
[2026-01-31 04:49:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 04:49:25] Running /usr/bin/apptainer --version
[2026-01-31 04:49:25] apptainer version 1.4.4-1.el9
[2026-01-31 04:49:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 04:49:25] pckelar7.cern.ch
[2026-01-31 04:49:25] apptainer works
[2026-01-31 04:49:25] Set ATHENA_PROC_NUMBER=12
[2026-01-31 04:49:25] Set ATHENA_CORE_NUMBER=12
[2026-01-31 04:49:25] Starting ATLAS job with PandaID=6986364759
[2026-01-31 04:49:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 06:56:01]  *** The last 200 lines of the pilot log: ***
[2026-01-31 06:56:01] 2026-01-31 05:54:56,427 | INFO     | job 6986364759 has state=finished
[2026-01-31 06:56:01] 2026-01-31 05:54:56,427 | INFO     | preparing for final server update for job 6986364759 in state='finished'
[2026-01-31 06:56:01] 2026-01-31 05:54:56,428 | INFO     | reading metadata from: /var/lib/boinc/slots/0/PanDA_Pilot-6986364759/jobReport.json
[2026-01-31 06:56:01] 2026-01-31 05:54:56,431 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/0/workernode_map.json
[2026-01-31 06:56:01] 2026-01-31 05:54:56,431 | INFO     | this job has now completed (state=finished)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,432 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,432 | INFO     | log transfer has been attempted: DONE
[2026-01-31 06:56:01] 2026-01-31 05:54:56,432 | INFO     | job 6986364759 has finished - writing final server update
[2026-01-31 06:56:01] 2026-01-31 05:54:56,432 | INFO     | total number of processed events: 400 (read)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,438 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6986364759/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,438 | INFO     | extracted standard info from prmon json
[2026-01-31 06:56:01] 2026-01-31 05:54:56,439 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 06:56:01] 2026-01-31 05:54:56,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 06:56:01] 2026-01-31 05:54:56,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 06:56:01] 2026-01-31 05:54:56,439 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 06:56:01] 2026-01-31 05:54:56,443 | INFO     | fitting pss+swap vs Time
[2026-01-31 06:56:01] 2026-01-31 05:54:56,444 | INFO     | sum of square deviations: 576985702.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,445 | INFO     | sum of deviations: -160792340.00000197
[2026-01-31 06:56:01] 2026-01-31 05:54:56,445 | INFO     | mean x: 1769835130.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,445 | INFO     | mean y: 2760438.601626016
[2026-01-31 06:56:01] 2026-01-31 05:54:56,445 | INFO     | intersect: 495971849.1798862
[2026-01-31 06:56:01] 2026-01-31 05:54:56,446 | INFO     | chi2: 1.584489398597659
[2026-01-31 06:56:01] 2026-01-31 05:54:56,446 | INFO     | sum of square deviations: 509440249.5
[2026-01-31 06:56:01] 2026-01-31 05:54:56,447 | INFO     | sum of deviations: -29326115.99999722
[2026-01-31 06:56:01] 2026-01-31 05:54:56,447 | INFO     | mean x: 1769834977.5
[2026-01-31 06:56:01] 2026-01-31 05:54:56,447 | INFO     | mean y: 2760737.338983051
[2026-01-31 06:56:01] 2026-01-31 05:54:56,448 | INFO     | intersect: 104641941.07574722
[2026-01-31 06:56:01] 2026-01-31 05:54:56,448 | INFO     | chi2: 1.5850160768504549
[2026-01-31 06:56:01] 2026-01-31 05:54:56,448 | INFO     | current chi2=1.5850160768504549 (change=-0.03323961985874354 %)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,448 | INFO     | right removable region: 117
[2026-01-31 06:56:01] 2026-01-31 05:54:56,449 | INFO     | sum of square deviations: 509440249.5
[2026-01-31 06:56:01] 2026-01-31 05:54:56,449 | INFO     | sum of deviations: -19239850332.5
[2026-01-31 06:56:01] 2026-01-31 05:54:56,450 | INFO     | mean x: 1769835282.5
[2026-01-31 06:56:01] 2026-01-31 05:54:56,450 | INFO     | mean y: 2802684.8898305083
[2026-01-31 06:56:01] 2026-01-31 05:54:56,450 | INFO     | intersect: 66843547957.56554
[2026-01-31 06:56:01] 2026-01-31 05:54:56,450 | INFO     | chi2: 0.18435816724694215
[2026-01-31 06:56:01] 2026-01-31 05:54:56,451 | INFO     | current chi2=0.18435816724694215 (change=88.36482166367873 %)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,451 | INFO     | sum of square deviations: 447383272.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,452 | INFO     | sum of deviations: -14815193159.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,452 | INFO     | mean x: 1769835435.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,452 | INFO     | mean y: 2791756.5221238937
[2026-01-31 06:56:01] 2026-01-31 05:54:56,452 | INFO     | intersect: 58611272381.984116
[2026-01-31 06:56:01] 2026-01-31 05:54:56,453 | INFO     | chi2: 0.17422176575920195
[2026-01-31 06:56:01] 2026-01-31 05:54:56,453 | INFO     | current chi2=0.17422176575920195 (change=5.498211247762513 %)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,453 | INFO     | left removable region: 20
[2026-01-31 06:56:01] 2026-01-31 05:54:56,453 | INFO     | sum of square deviations: 282974608.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,454 | INFO     | sum of deviations: -3424124162.999999
[2026-01-31 06:56:01] 2026-01-31 05:54:56,454 | INFO     | mean x: 1769835557.0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,454 | INFO     | mean y: 2760412.412371134
[2026-01-31 06:56:01] 2026-01-31 05:54:56,455 | INFO     | intersect: 21418592518.663624
[2026-01-31 06:56:01] 2026-01-31 05:54:56,455 | INFO     | chi2: 0.08996628391580098
[2026-01-31 06:56:01] 2026-01-31 05:54:56,455 | INFO     | current memory leak: -12.10 B/s (using 97 data points, chi2=0.09)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,455 | INFO     | could have reported an average CPU frequency of 2816 MHz (8 samples)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,456 | INFO     | ..............................
[2026-01-31 06:56:01] 2026-01-31 05:54:56,456 | INFO     | . Timing measurements:
[2026-01-31 06:56:01] 2026-01-31 05:54:56,456 | INFO     | . get job = 0 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,456 | INFO     | . initial setup = 6 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,456 | INFO     | . payload setup = 8 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,457 | INFO     | . stage-in = 0 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,457 | INFO     | . payload execution = 7485 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,457 | INFO     | . stage-out = 1 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,457 | INFO     | . log creation = 0 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,457 | INFO     | ..............................
[2026-01-31 06:56:01] 2026-01-31 05:54:56,634 | INFO     | 
[2026-01-31 06:56:01] 2026-01-31 05:54:56,634 | INFO     | job summary report
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | --------------------------------------------------
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | PanDA job id: 6986364759
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | task id: 48318026
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | errors: (none)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 06:56:01] 2026-01-31 05:54:56,635 | INFO     | pilot state: finished 
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | transexitcode: 0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | exeerrorcode: 0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | exeerrordiag: 
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | exitcode: 0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | exitmsg: OK
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | cpuconsumptiontime: 84008 s
[2026-01-31 06:56:01] 2026-01-31 05:54:56,636 | INFO     | nevents: 400
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | neventsw: 0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | pid: 104883
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | pgrp: 104883
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | corecount: 12
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | event service: False
[2026-01-31 06:56:01] 2026-01-31 05:54:56,637 | INFO     | sizes: {0: 2278057, 1: 2278291, 12: 2278291, 7498: 2305596, 7500: 2314650, 7501: 2314788}
[2026-01-31 06:56:01] 2026-01-31 05:54:56,638 | INFO     | --------------------------------------------------
[2026-01-31 06:56:01] 2026-01-31 05:54:56,638 | INFO     | 
[2026-01-31 06:56:01] 2026-01-31 05:54:56,638 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-31 06:56:01] 2026-01-31 05:54:56,658 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,658 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,658 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,659 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,659 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,659 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,661 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 06:56:01] 2026-01-31 05:54:56,662 | INFO     | job 6986364759 has completed (purged errors)
[2026-01-31 06:56:01] 2026-01-31 05:54:56,662 | INFO     | overall cleanup function is called
[2026-01-31 06:56:01] 2026-01-31 05:54:57,670 | INFO     | --- collectZombieJob: --- 10, [104883]
[2026-01-31 06:56:01] 2026-01-31 05:54:57,671 | INFO     | zombie collector waiting for pid 104883
[2026-01-31 06:56:01] 2026-01-31 05:54:57,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 06:56:01] 2026-01-31 05:54:57,671 | INFO     | collected zombie processes
[2026-01-31 06:56:01] 2026-01-31 05:54:57,671 | INFO     | will attempt to kill all subprocesses of pid=104883
[2026-01-31 06:56:01] 2026-01-31 05:54:57,844 | INFO     | process IDs to be killed: [104883] (in reverse order)
[2026-01-31 06:56:01] 2026-01-31 05:54:57,902 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 06:56:01] 2026-01-31 05:54:57,902 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 06:56:01] 2026-01-31 05:54:57,909 | INFO     | did not find any defunct processes belonging to 104883
[2026-01-31 06:56:01] 2026-01-31 05:54:57,914 | INFO     | did not find any defunct processes belonging to 104883
[2026-01-31 06:56:01] 2026-01-31 05:54:57,915 | INFO     | ready for new job
[2026-01-31 06:56:01] 2026-01-31 05:54:57,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 06:56:01] 2026-01-31 05:54:57,917 | INFO     | **************************************
[2026-01-31 06:56:01] 2026-01-31 05:54:57,917 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 06:56:01] 2026-01-31 05:54:57,917 | INFO     | **************************************
[2026-01-31 06:56:01] 2026-01-31 05:54:57,917 | INFO     | 
[2026-01-31 06:56:01] 2026-01-31 05:54:57,919 | INFO     | architecture information:
[2026-01-31 06:56:01] 2026-01-31 05:54:57,919 | INFO     | executing command: cat /etc/os-release
[2026-01-31 06:56:01] 2026-01-31 05:54:57,935 | INFO     | cat /etc/os-release:
[2026-01-31 06:56:01] NAME="CentOS Linux"
[2026-01-31 06:56:01] VERSION="7 (Core)"
[2026-01-31 06:56:01] ID="centos"
[2026-01-31 06:56:01] ID_LIKE="rhel fedora"
[2026-01-31 06:56:01] VERSION_ID="7"
[2026-01-31 06:56:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 06:56:01] ANSI_COLOR="0;31"
[2026-01-31 06:56:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 06:56:01] HOME_URL="https://www.centos.org/"
[2026-01-31 06:56:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 06:56:01] 
[2026-01-31 06:56:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 06:56:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 06:56:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 06:56:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 06:56:01] 
[2026-01-31 06:56:01] 2026-01-31 05:54:57,935 | INFO     | **************************************
[2026-01-31 06:56:01] 2026-01-31 05:54:58,439 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-31 06:56:01] 2026-01-31 05:54:58,453 | INFO     | sufficient remaining disk space (1782984998912 B)
[2026-01-31 06:56:01] 2026-01-31 05:54:58,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 06:56:01] 2026-01-31 05:54:58,454 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 06:56:01] 2026-01-31 05:54:58,454 | INFO     | update_server=False
[2026-01-31 06:56:01] 2026-01-31 05:54:58,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 06:56:01] 2026-01-31 05:54:58,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 06:56:01] 2026-01-31 05:54:58,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 06:56:01] 2026-01-31 05:54:58,460 | INFO     | all data control threads have been joined
[2026-01-31 06:56:01] 2026-01-31 05:54:58,902 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 06:56:01] 2026-01-31 05:54:58,902 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 06:56:01] 2026-01-31 05:54:58,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 06:56:01] 2026-01-31 05:54:58,903 | INFO     | will abort loop
[2026-01-31 06:56:01] 2026-01-31 05:54:58,911 | INFO     | all payload control threads have been joined
[2026-01-31 06:56:01] 2026-01-31 05:54:59,460 | INFO     | [job] retrieve thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,460 | INFO     | [job] queue monitor thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,463 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,465 | INFO     | [data] control thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,571 | INFO     | all job control threads have been joined
[2026-01-31 06:56:01] 2026-01-31 05:54:59,631 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,908 | INFO     | [job] job monitor thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,916 | INFO     | [payload] control thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:54:59,929 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,174 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,460 | INFO     | [data] copytool_out thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,475 | INFO     | [data] copytool_in thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,476 | INFO     | [payload] failed_post thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,576 | INFO     | [job] control thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:00,826 | INFO     | [job] validate thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:01,027 | INFO     | [payload] validate_post thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:01,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 06:56:01] 2026-01-31 05:55:05,476 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 06:56:01] 2026-01-31 05:55:29,340 | INFO     | PID=99487 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 06:56:01] 2026-01-31 05:55:29,340 | INFO     | .. there are 2 such processes running
[2026-01-31 06:56:01] 2026-01-31 05:55:29,341 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 06:56:01] 2026-01-31 05:55:29,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 06:56:01] 2026-01-31 05:55:29,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 06:56:01] 2026-01-31 05:55:54,412 | INFO     | [monitor] cgroup control has ended
[2026-01-31 06:56:01] 2026-01-31 05:55:55,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168019519296)>', '<ExcThread(monitor, started 140167381767936)>']
[2026-01-31 06:56:01] 2026-01-31 05:55:56,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 06:56:01] 2026-01-31 05:55:56,477 | INFO     | [monitor] control thread has ended
[2026-01-31 06:56:01] 2026-01-31 05:56:00,969 | INFO     | all workflow threads have been joined
[2026-01-31 06:56:01] 2026-01-31 05:56:00,969 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 06:56:01] 2026-01-31 05:56:00,969 | INFO     | traces error code: 0
[2026-01-31 06:56:01] 2026-01-31 05:56:00,970 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 06:56:01] 2026-01-31 05:56:01,093 [wrapper] ==== pilot stdout END ====
[2026-01-31 06:56:01] 2026-01-31 05:56:01,095 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 06:56:01] 2026-01-31 05:56:01,097 [wrapper] pilotpid: 99487
[2026-01-31 06:56:01] 2026-01-31 05:56:01,099 [wrapper] Pilot exit status: 0
[2026-01-31 06:56:01] 2026-01-31 05:56:01,107 [wrapper] pandaids: 6986364759
[2026-01-31 06:56:01] 2026-01-31 05:56:01,132 [wrapper] cleanup supervisor_pilot  139937 99488
[2026-01-31 06:56:01] 2026-01-31 05:56:01,134 [wrapper] Test setup, not cleaning
[2026-01-31 06:56:01] 2026-01-31 05:56:01,136 [wrapper] apfmon messages muted
[2026-01-31 06:56:01] 2026-01-31 05:56:01,138 [wrapper] ==== wrapper stdout END ====
[2026-01-31 06:56:01] 2026-01-31 05:56:01,140 [wrapper] ==== wrapper stderr END ====
[2026-01-31 06:56:01]  *** Error codes and diagnostics ***
[2026-01-31 06:56:01]     "exeErrorCode": 0,
[2026-01-31 06:56:01]     "exeErrorDiag": "",
[2026-01-31 06:56:01]     "pilotErrorCode": 0,
[2026-01-31 06:56:01]     "pilotErrorDiag": "",
[2026-01-31 06:56:01]  *** Listing of results directory ***
[2026-01-31 06:56:01] total 734028
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc    584422 Jan 30 17:41 pilot3.tar.gz
[2026-01-31 06:56:01] -rwx------ 1 boinc boinc     36322 Jan 30 17:43 runpilot2-wrapper.sh
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc      5111 Jan 30 17:44 queuedata.json
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc       100 Jan 31 04:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 06:56:01] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 04:49 run_atlas
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc       105 Jan 31 04:49 job.xml
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc 538772679 Jan 31 04:49 EVNT.48318024._000041.pool.root.1
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc      6251 Jan 31 04:49 init_data.xml
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc     15845 Jan 31 04:49 start_atlas.sh
[2026-01-31 06:56:01] drwxrwx--x 2 boinc boinc      4096 Jan 31 04:49 shared
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc    597766 Jan 31 04:49 input.tar.gz
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc         0 Jan 31 04:49 boinc_lockfile
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc      2523 Jan 31 04:49 pandaJob.out
[2026-01-31 06:56:01] -rw------- 1 boinc boinc   1010528 Jan 31 04:49 agis_schedconf.cvmfs.json
[2026-01-31 06:56:01] -rw------- 1 boinc boinc   1511668 Jan 31 04:49 agis_ddmendpoints.agis.ALL.json
[2026-01-31 06:56:01] -rw------- 1 boinc boinc       436 Jan 31 04:49 workernode_map.json
[2026-01-31 06:56:01] drwx------ 5 boinc boinc      4096 Jan 31 04:49 pilot3
[2026-01-31 06:56:01] -rw------- 1 boinc boinc 205936925 Jan 31 06:54 HITS.48318026._001981.pool.root.1
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc       530 Jan 31 06:54 boinc_task_state.xml
[2026-01-31 06:56:01] -rw------- 1 boinc boinc      1024 Jan 31 06:54 memory_monitor_summary.json
[2026-01-31 06:56:01] -rw------- 1 boinc boinc    420693 Jan 31 06:54 log.48318026._001981.job.log.tgz.1
[2026-01-31 06:56:01] -rw------- 1 boinc boinc      6351 Jan 31 06:54 heartbeat.json
[2026-01-31 06:56:01] -rw------- 1 boinc boinc        95 Jan 31 06:55 pilot_heartbeat.json
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc      8192 Jan 31 06:55 boinc_mmap_file
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc        27 Jan 31 06:55 wrapper_checkpoint.txt
[2026-01-31 06:56:01] -rw------- 1 boinc boinc      5005 Jan 31 06:56 pilotlog.txt
[2026-01-31 06:56:01] -rw------- 1 boinc boinc   1075291 Jan 31 06:56 log.48318026._001981.job.log.1
[2026-01-31 06:56:01] -rw------- 1 boinc boinc       357 Jan 31 06:56 output.list
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc       620 Jan 31 06:56 runtime_log
[2026-01-31 06:56:01] -rw------- 1 boinc boinc   1515520 Jan 31 06:56 result.tar.gz
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc      8840 Jan 31 06:56 runtime_log.err
[2026-01-31 06:56:01] -rw------- 1 boinc boinc       658 Jan 31 06:56 hDKNDmhl658nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmklLKDmPr4afm.diag
[2026-01-31 06:56:01] -rw-r--r-- 1 boinc boinc     21204 Jan 31 06:56 stderr.txt
[2026-01-31 06:56:01] HITS file was successfully produced:
[2026-01-31 06:56:01] -rw------- 1 boinc boinc 205936925 Jan 31 06:54 shared/HITS.pool.root.1
[2026-01-31 06:56:01]  *** Contents of shared directory: ***
[2026-01-31 06:56:01] total 729348
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc 538772679 Jan 31 04:49 ATLAS.root_0
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc     15845 Jan 31 04:49 start_atlas.sh
[2026-01-31 06:56:01] -rw-r--r-- 2 boinc boinc    597766 Jan 31 04:49 input.tar.gz
[2026-01-31 06:56:01] -rw------- 1 boinc boinc 205936925 Jan 31 06:54 HITS.pool.root.1
[2026-01-31 06:56:01] -rw------- 1 boinc boinc   1515520 Jan 31 06:56 result.tar.gz
06:56:02 (95317): run_atlas exited; CPU time 84159.261360
06:56:02 (95317): called boinc_finish(0)

</stderr_txt>
]]>

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