Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:54 (1325062): wrapper (7.7.26015): starting
21:45:54 (1325062): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 21:45:54] Arguments: --nthreads 4
[2026-02-04 21:45:54] Threads: 4
[2026-02-04 21:45:54] Checking for CVMFS
[2026-02-04 21:45:54] No cvmfs_config command found, will try listing directly
[2026-02-04 21:45:54] CVMFS is ok
[2026-02-04 21:45:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 21:45:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 21:45:54] Further information can be found at the LHC@home message board.
[2026-02-04 21:45:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 21:45:54] Checking for apptainer binary...
[2026-02-04 21:45:54] which: no apptainer in ((null))
[2026-02-04 21:45:54] apptainer is not installed, using version from CVMFS
[2026-02-04 21:45:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 21:45:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-02-04 21:45:54] apptainer works
[2026-02-04 21:45:54] Set ATHENA_PROC_NUMBER=4
[2026-02-04 21:45:54] Set ATHENA_CORE_NUMBER=4
[2026-02-04 21:45:54] Starting ATLAS job with PandaID=6993977130
[2026-02-04 21:45:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 02:38:18]  *** The last 200 lines of the pilot log: ***
[2026-02-05 02:38:18] 2026-02-05 01:17:01,320 | INFO     | job 6993977130 has state=finished
[2026-02-05 02:38:18] 2026-02-05 01:17:01,320 | INFO     | preparing for final server update for job 6993977130 in state='finished'
[2026-02-05 02:38:18] 2026-02-05 01:17:01,977 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-05 02:38:18] 2026-02-05 01:17:01,977 | INFO     | reading metadata from: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6993977130/jobReport.json
[2026-02-05 02:38:18] 2026-02-05 01:17:01,980 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot28/slots/0/workernode_map.json
[2026-02-05 02:38:18] 2026-02-05 01:17:01,981 | INFO     | this job has now completed (state=finished)
[2026-02-05 02:38:18] 2026-02-05 01:17:01,981 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 02:38:18] 2026-02-05 01:17:01,981 | INFO     | log transfer has been attempted: DONE
[2026-02-05 02:38:18] 2026-02-05 01:17:01,981 | INFO     | job 6993977130 has finished - writing final server update
[2026-02-05 02:38:18] 2026-02-05 01:17:01,981 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1229580/.job.ad'
[2026-02-05 02:38:18] 2026-02-05 01:17:01,982 | INFO     | total number of processed events: 400 (read)
[2026-02-05 02:38:18] 2026-02-05 01:17:01,990 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6993977130/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 02:38:18] 2026-02-05 01:17:01,991 | INFO     | extracted standard info from prmon json
[2026-02-05 02:38:18] 2026-02-05 01:17:01,991 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 02:38:18] 2026-02-05 01:17:01,991 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 02:38:18] 2026-02-05 01:17:01,991 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 02:38:18] 2026-02-05 01:17:01,991 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 02:38:18] 2026-02-05 01:17:01,997 | INFO     | fitting pss+swap vs Time
[2026-02-05 02:38:18] 2026-02-05 01:17:01,998 | INFO     | sum of square deviations: 5836025702.5
[2026-02-05 02:38:18] 2026-02-05 01:17:02,000 | INFO     | sum of deviations: 8387801400.999998
[2026-02-05 02:38:18] 2026-02-05 01:17:02,000 | INFO     | mean x: 1770246075.5
[2026-02-05 02:38:18] 2026-02-05 01:17:02,001 | INFO     | mean y: 2337441.8571428573
[2026-02-05 02:38:18] 2026-02-05 01:17:02,001 | INFO     | intersect: -2541940679.7818613
[2026-02-05 02:38:18] 2026-02-05 01:17:02,001 | INFO     | chi2: 1.462842321654409
[2026-02-05 02:38:18] 2026-02-05 01:17:02,002 | INFO     | sum of square deviations: 5513070810.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,004 | INFO     | sum of deviations: 8046360000.999999
[2026-02-05 02:38:18] 2026-02-05 01:17:02,004 | INFO     | mean x: 1770245923.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,005 | INFO     | mean y: 2337280.6091954024
[2026-02-05 02:38:18] 2026-02-05 01:17:02,005 | INFO     | intersect: -2581347289.68939
[2026-02-05 02:38:18] 2026-02-05 01:17:02,005 | INFO     | chi2: 1.4629776964021732
[2026-02-05 02:38:18] 2026-02-05 01:17:02,006 | INFO     | current chi2=1.4629776964021732 (change=-0.009254226908820018 %)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,006 | INFO     | right removable region: 260
[2026-02-05 02:38:18] 2026-02-05 01:17:02,006 | INFO     | sum of square deviations: 5513070810.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,009 | INFO     | sum of deviations: -26984956313.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,009 | INFO     | mean x: 1770246228.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,009 | INFO     | mean y: 2353990.153256705
[2026-02-05 02:38:18] 2026-02-05 01:17:02,009 | INFO     | intersect: 8667219501.980965
[2026-02-05 02:38:18] 2026-02-05 01:17:02,010 | INFO     | chi2: 0.09693991085349621
[2026-02-05 02:38:18] 2026-02-05 01:17:02,010 | INFO     | current chi2=0.09693991085349621 (change=93.37318114068086 %)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,011 | INFO     | sum of square deviations: 5202255680.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,013 | INFO     | sum of deviations: -23004420589.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,013 | INFO     | mean x: 1770246380.5
[2026-02-05 02:38:18] 2026-02-05 01:17:02,013 | INFO     | mean y: 2352027.2265625
[2026-02-05 02:38:18] 2026-02-05 01:17:02,014 | INFO     | intersect: 7830397165.364972
[2026-02-05 02:38:18] 2026-02-05 01:17:02,014 | INFO     | chi2: 0.09082334156819641
[2026-02-05 02:38:18] 2026-02-05 01:17:02,014 | INFO     | current chi2=0.09082334156819641 (change=6.309650206449723 %)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,014 | INFO     | left removable region: 20
[2026-02-05 02:38:18] 2026-02-05 01:17:02,015 | INFO     | sum of square deviations: 4286517580.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,017 | INFO     | sum of deviations: -10974379643.0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,017 | INFO     | mean x: 1770246502.5
[2026-02-05 02:38:18] 2026-02-05 01:17:02,017 | INFO     | mean y: 2345753.658333333
[2026-02-05 02:38:18] 2026-02-05 01:17:02,018 | INFO     | intersect: 4534546267.840746
[2026-02-05 02:38:18] 2026-02-05 01:17:02,018 | INFO     | chi2: 0.06079686243334109
[2026-02-05 02:38:18] 2026-02-05 01:17:02,018 | INFO     | current memory leak: -2.56 B/s (using 240 data points, chi2=0.06)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,019 | INFO     | could have reported an average CPU frequency of 2428 MHz (13 samples)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,019 | INFO     | ..............................
[2026-02-05 02:38:18] 2026-02-05 01:17:02,019 | INFO     | . Timing measurements:
[2026-02-05 02:38:18] 2026-02-05 01:17:02,019 | INFO     | . get job = 0 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . initial setup = 5 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . payload setup = 5 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . stage-in = 0 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . payload execution = 16225 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . stage-out = 1 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | . log creation = 0 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,020 | INFO     | ..............................
[2026-02-05 02:38:18] 2026-02-05 01:17:02,534 | INFO     | 
[2026-02-05 02:38:18] 2026-02-05 01:17:02,534 | INFO     | job summary report
[2026-02-05 02:38:18] 2026-02-05 01:17:02,534 | INFO     | --------------------------------------------------
[2026-02-05 02:38:18] 2026-02-05 01:17:02,534 | INFO     | PanDA job id: 6993977130
[2026-02-05 02:38:18] 2026-02-05 01:17:02,534 | INFO     | task id: 48317892
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | errors: (none)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | pilot state: finished 
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | transexitcode: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | exeerrorcode: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | exeerrordiag: 
[2026-02-05 02:38:18] 2026-02-05 01:17:02,535 | INFO     | exitcode: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | exitmsg: OK
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | cpuconsumptiontime: 62309 s
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | nevents: 400
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | neventsw: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | pid: 1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | pgrp: 1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | corecount: 4
[2026-02-05 02:38:18] 2026-02-05 01:17:02,536 | INFO     | event service: False
[2026-02-05 02:38:18] 2026-02-05 01:17:02,537 | INFO     | sizes: {0: 2278027, 1: 2278233, 11: 2278261, 16235: 2309614, 16236: 2318690, 16240: 2318852}
[2026-02-05 02:38:18] 2026-02-05 01:17:02,537 | INFO     | --------------------------------------------------
[2026-02-05 02:38:18] 2026-02-05 01:17:02,537 | INFO     | 
[2026-02-05 02:38:18] 2026-02-05 01:17:02,537 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-02-05 02:38:18] 2026-02-05 01:17:02,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,557 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,558 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,558 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,561 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 02:38:18] 2026-02-05 01:17:02,561 | INFO     | job 6993977130 has completed (purged errors)
[2026-02-05 02:38:18] 2026-02-05 01:17:02,561 | INFO     | overall cleanup function is called
[2026-02-05 02:38:18] 2026-02-05 01:17:03,570 | INFO     | --- collectZombieJob: --- 10, [1333722]
[2026-02-05 02:38:18] 2026-02-05 01:17:03,570 | INFO     | zombie collector waiting for pid 1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:03,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 02:38:18] 2026-02-05 01:17:03,570 | INFO     | collected zombie processes
[2026-02-05 02:38:18] 2026-02-05 01:17:03,570 | INFO     | will attempt to kill all subprocesses of pid=1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:03,876 | INFO     | process IDs to be killed: [1333722] (in reverse order)
[2026-02-05 02:38:18] 2026-02-05 01:17:03,976 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 02:38:18] 2026-02-05 01:17:03,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 02:38:18] 2026-02-05 01:17:03,986 | INFO     | did not find any defunct processes belonging to 1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:03,993 | INFO     | did not find any defunct processes belonging to 1333722
[2026-02-05 02:38:18] 2026-02-05 01:17:03,993 | INFO     | ready for new job
[2026-02-05 02:38:18] 2026-02-05 01:17:03,993 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 02:38:18] 2026-02-05 01:17:03,996 | INFO     | **************************************
[2026-02-05 02:38:18] 2026-02-05 01:17:03,996 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 02:38:18] 2026-02-05 01:17:03,996 | INFO     | **************************************
[2026-02-05 02:38:18] 2026-02-05 01:17:03,996 | INFO     | 
[2026-02-05 02:38:18] 2026-02-05 01:17:03,999 | INFO     | architecture information:
[2026-02-05 02:38:18] 2026-02-05 01:17:03,999 | INFO     | executing command: cat /etc/os-release
[2026-02-05 02:38:18] 2026-02-05 01:17:04,011 | INFO     | cat /etc/os-release:
[2026-02-05 02:38:18] NAME="CentOS Linux"
[2026-02-05 02:38:18] VERSION="7 (Core)"
[2026-02-05 02:38:18] ID="centos"
[2026-02-05 02:38:18] ID_LIKE="rhel fedora"
[2026-02-05 02:38:18] VERSION_ID="7"
[2026-02-05 02:38:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 02:38:18] ANSI_COLOR="0;31"
[2026-02-05 02:38:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 02:38:18] HOME_URL="https://www.centos.org/"
[2026-02-05 02:38:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 02:38:18] 
[2026-02-05 02:38:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 02:38:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 02:38:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 02:38:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 02:38:18] 
[2026-02-05 02:38:18] 2026-02-05 01:17:04,012 | INFO     | **************************************
[2026-02-05 02:38:18] 2026-02-05 01:17:04,513 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-02-05 02:38:18] 2026-02-05 01:17:04,529 | INFO     | sufficient remaining disk space (1668816044032 B)
[2026-02-05 02:38:18] 2026-02-05 01:17:04,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 02:38:18] 2026-02-05 01:17:04,530 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 02:38:18] 2026-02-05 01:17:04,530 | INFO     | update_server=False
[2026-02-05 02:38:18] 2026-02-05 01:17:04,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 02:38:18] 2026-02-05 01:17:04,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 02:38:18] 2026-02-05 01:17:04,531 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 02:38:18] 2026-02-05 01:17:04,531 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 02:38:18] 2026-02-05 01:17:04,531 | INFO     | aborting loop
[2026-02-05 02:38:18] 2026-02-05 01:17:05,161 | INFO     | all payload control threads have been joined
[2026-02-05 02:38:18] 2026-02-05 01:17:05,349 | INFO     | all data control threads have been joined
[2026-02-05 02:38:18] 2026-02-05 01:17:05,533 | INFO     | [job] job monitor thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:05,536 | INFO     | [job] retrieve thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:05,708 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:05,844 | INFO     | [payload] validate_post thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,023 | INFO     | [job] validate thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,166 | INFO     | [payload] control thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,182 | INFO     | all job control threads have been joined
[2026-02-05 02:38:18] 2026-02-05 01:17:06,183 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,352 | INFO     | [data] control thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,390 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,407 | INFO     | [payload] failed_post thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,452 | INFO     | [data] copytool_in thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,537 | INFO     | [data] copytool_out thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:06,730 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:07,143 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 02:38:18] 2026-02-05 01:17:07,187 | INFO     | [job] control thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:08,149 | INFO     | [job] queue monitor thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:08,536 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 02:38:18] 2026-02-05 01:17:34,304 | INFO     | PID=1329089 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 02:38:18] 2026-02-05 01:17:34,304 | INFO     | .. there are 4 such processes running
[2026-02-05 02:38:18] 2026-02-05 01:17:34,305 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 02:38:18] 2026-02-05 01:17:34,305 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 02:38:18] 2026-02-05 01:17:34,305 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 02:38:18] 2026-02-05 01:17:36,948 | INFO     | [monitor] cgroup control has ended
[2026-02-05 02:38:18] 2026-02-05 01:17:38,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22698735847232)>', '<ExcThread(monitor, started 22698296076032)>']
[2026-02-05 02:38:18] 2026-02-05 01:17:38,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 02:38:18] 2026-02-05 01:17:38,321 | INFO     | [monitor] control thread has ended
[2026-02-05 02:38:18] 2026-02-05 01:17:43,195 | INFO     | all workflow threads have been joined
[2026-02-05 02:38:18] 2026-02-05 01:17:43,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 02:38:18] 2026-02-05 01:17:43,196 | INFO     | traces error code: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:43,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 02:38:18] 2026-02-05 01:17:43,307 [wrapper] ==== pilot stdout END ====
[2026-02-05 02:38:18] 2026-02-05 01:17:43,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 02:38:18] 2026-02-05 01:17:43,313 [wrapper] pilotpid: 1329089
[2026-02-05 02:38:18] 2026-02-05 01:17:43,315 [wrapper] Pilot exit status: 0
[2026-02-05 02:38:18] 2026-02-05 01:17:43,326 [wrapper] pandaids: 6993977130
[2026-02-05 02:38:18] 2026-02-05 01:17:43,381 [wrapper] cleanup supervisor_pilot 1483755 1329090
[2026-02-05 02:38:18] 2026-02-05 01:17:43,384 [wrapper] Test setup, not cleaning
[2026-02-05 02:38:18] 2026-02-05 01:17:43,387 [wrapper] apfmon messages muted
[2026-02-05 02:38:18] 2026-02-05 01:17:43,389 [wrapper] ==== wrapper stdout END ====
[2026-02-05 02:38:18] 2026-02-05 01:17:43,392 [wrapper] ==== wrapper stderr END ====
[2026-02-05 02:38:18]  *** Error codes and diagnostics ***
[2026-02-05 02:38:18]     "exeErrorCode": 0,
[2026-02-05 02:38:18]     "exeErrorDiag": "",
[2026-02-05 02:38:18]     "pilotErrorCode": 0,
[2026-02-05 02:38:18]     "pilotErrorDiag": "",
[2026-02-05 02:38:18]  *** Listing of results directory ***
[2026-02-05 02:38:18] total 673292
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc      5111 Jan 30 21:39 queuedata.json
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc    584422 Jan 30 21:39 pilot3.tar.gz
[2026-02-05 02:38:18] -rwx------ 1 boinc boinc     36322 Jan 30 21:39 runpilot2-wrapper.sh
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc       100 Feb  4 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 02:38:18] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 21:11 run_atlas
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc       105 Feb  4 21:11 job.xml
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc 493742102 Feb  4 21:45 EVNT.48317889._000057.pool.root.1
[2026-02-05 02:38:18] drwxrwx--x 2 boinc boinc      4096 Feb  4 21:45 shared
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc    597754 Feb  4 21:45 input.tar.gz
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc     15845 Feb  4 21:45 start_atlas.sh
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc         0 Feb  4 21:45 boinc_lockfile
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc      2522 Feb  4 21:45 pandaJob.out
[2026-02-05 02:38:18] -rw------- 1 boinc boinc   1009552 Feb  4 21:46 agis_schedconf.cvmfs.json
[2026-02-05 02:38:18] -rw------- 1 boinc boinc       454 Feb  4 21:46 workernode_map.json
[2026-02-05 02:38:18] drwx------ 5 boinc boinc      4096 Feb  4 21:46 pilot3
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc      6427 Feb  4 22:12 init_data.xml
[2026-02-05 02:38:18] -rw------- 1 boinc boinc 186273598 Feb  5 02:16 HITS.48317892._002982.pool.root.1
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc       529 Feb  5 02:16 boinc_task_state.xml
[2026-02-05 02:38:18] -rw------- 1 boinc boinc      1030 Feb  5 02:16 memory_monitor_summary.json
[2026-02-05 02:38:18] -rw------- 1 boinc boinc   1511668 Feb  5 02:16 agis_ddmendpoints.agis.ALL.json
[2026-02-05 02:38:18] -rw------- 1 boinc boinc    461976 Feb  5 02:16 log.48317892._002982.job.log.tgz.1
[2026-02-05 02:38:18] -rw------- 1 boinc boinc      6405 Feb  5 02:17 heartbeat.json
[2026-02-05 02:38:18] -rw------- 1 boinc boinc        95 Feb  5 02:17 pilot_heartbeat.json
[2026-02-05 02:38:18] -rw------- 1 boinc boinc      4830 Feb  5 02:17 pilotlog.txt
[2026-02-05 02:38:18] -rw------- 1 boinc boinc   2289578 Feb  5 02:17 log.48317892._002982.job.log.1
[2026-02-05 02:38:18] -rw------- 1 boinc boinc       357 Feb  5 02:17 output.list
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc       620 Feb  5 02:17 runtime_log
[2026-02-05 02:38:18] -rw------- 1 boinc boinc   2764800 Feb  5 02:17 result.tar.gz
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc      9205 Feb  5 02:17 runtime_log.err
[2026-02-05 02:38:18] -rw------- 1 boinc boinc       666 Feb  5 02:17 YpNODmLSA68n9Rq4apOajLDm4fhM0noT9bVooX4SDmcpLKDmfy5cOo.diag
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc        26 Feb  5 02:37 wrapper_checkpoint.txt
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc      8192 Feb  5 02:38 boinc_mmap_file
[2026-02-05 02:38:18] -rw-r--r-- 1 boinc boinc     21113 Feb  5 02:38 stderr.txt
[2026-02-05 02:38:18] HITS file was successfully produced:
[2026-02-05 02:38:18] -rw------- 1 boinc boinc 186273598 Feb  5 02:16 shared/HITS.pool.root.1
[2026-02-05 02:38:18]  *** Contents of shared directory: ***
[2026-02-05 02:38:18] total 667388
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc 493742102 Feb  4 21:45 ATLAS.root_0
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc    597754 Feb  4 21:45 input.tar.gz
[2026-02-05 02:38:18] -rw-r--r-- 2 boinc boinc     15845 Feb  4 21:45 start_atlas.sh
[2026-02-05 02:38:18] -rw------- 1 boinc boinc 186273598 Feb  5 02:16 HITS.pool.root.1
[2026-02-05 02:38:18] -rw------- 1 boinc boinc   2764800 Feb  5 02:17 result.tar.gz
02:38:20 (1325062): run_atlas exited; CPU time 62961.899515
02:38:20 (1325062): called boinc_finish(0)

</stderr_txt>
]]>

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