Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:42 (50803): wrapper (7.7.26015): starting
02:46:42 (50803): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 02:46:42] Arguments: --nthreads 12
[2026-01-31 02:46:42] Threads: 12
[2026-01-31 02:46:42] Checking for CVMFS
[2026-01-31 02:46:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 02:46:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 02:46:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 02:46:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 02:46:42] 2.13.3.0 2948017 3481 76876 155697 3 50 2550511 4097024 922 130560 0 3062515 99.844 461352 20197 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-31 02:46:42] CVMFS is ok
[2026-01-31 02:46:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 02:46:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 02:46:42] Further information can be found at the LHC@home message board.
[2026-01-31 02:46:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 02:46:42] Checking for apptainer binary...
[2026-01-31 02:46:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 02:46:42] Running /usr/bin/apptainer --version
[2026-01-31 02:46:42] apptainer version 1.4.4-1.el9
[2026-01-31 02:46:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 02:46:43] pckelar7.cern.ch
[2026-01-31 02:46:43] apptainer works
[2026-01-31 02:46:43] Set ATHENA_PROC_NUMBER=12
[2026-01-31 02:46:43] Set ATHENA_CORE_NUMBER=12
[2026-01-31 02:46:43] Starting ATLAS job with PandaID=6984043268
[2026-01-31 02:46:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 04:49:18]  *** The last 200 lines of the pilot log: ***
[2026-01-31 04:49:18] 2026-01-31 03:48:32,921 | INFO     | total number of processed events: 400 (read)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,926 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6984043268/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,927 | INFO     | extracted standard info from prmon json
[2026-01-31 04:49:18] 2026-01-31 03:48:32,927 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 04:49:18] 2026-01-31 03:48:32,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 04:49:18] 2026-01-31 03:48:32,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 04:49:18] 2026-01-31 03:48:32,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 04:49:18] 2026-01-31 03:48:32,932 | INFO     | fitting pss+swap vs Time
[2026-01-31 04:49:18] 2026-01-31 03:48:32,932 | INFO     | sum of square deviations: 535786790.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,933 | INFO     | sum of deviations: -8876251337.000002
[2026-01-31 04:49:18] 2026-01-31 03:48:32,933 | INFO     | mean x: 1769827662.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,933 | INFO     | mean y: 2732910.183333333
[2026-01-31 04:49:18] 2026-01-31 03:48:32,934 | INFO     | intersect: 29323043617.218895
[2026-01-31 04:49:18] 2026-01-31 03:48:32,934 | INFO     | chi2: 2.251644493135216
[2026-01-31 04:49:18] 2026-01-31 03:48:32,934 | INFO     | sum of square deviations: 471562330.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,935 | INFO     | sum of deviations: -199166647.00000462
[2026-01-31 04:49:18] 2026-01-31 03:48:32,935 | INFO     | mean x: 1769827510.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,936 | INFO     | mean y: 2752854.8173913043
[2026-01-31 04:49:18] 2026-01-31 03:48:32,936 | INFO     | intersect: 750248124.2870013
[2026-01-31 04:49:18] 2026-01-31 03:48:32,936 | INFO     | chi2: 1.558960843261945
[2026-01-31 04:49:18] 2026-01-31 03:48:32,936 | INFO     | current chi2=1.558960843261945 (change=30.76345542047671 %)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,937 | INFO     | sum of square deviations: 412686807.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,937 | INFO     | sum of deviations: 77349250.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,937 | INFO     | mean x: 1769827357.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,938 | INFO     | mean y: 2753571.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,938 | INFO     | intersect: -328962434.7525637
[2026-01-31 04:49:18] 2026-01-31 03:48:32,938 | INFO     | chi2: 1.5601879289161398
[2026-01-31 04:49:18] 2026-01-31 03:48:32,938 | INFO     | current chi2=1.5601879289161398 (change=-0.07871176877202254 %)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,939 | INFO     | right removable region: 109
[2026-01-31 04:49:18] 2026-01-31 03:48:32,939 | INFO     | sum of square deviations: 471562330.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,940 | INFO     | sum of deviations: -26542029640.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,940 | INFO     | mean x: 1769827815.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,940 | INFO     | mean y: 2773999.6
[2026-01-31 04:49:18] 2026-01-31 03:48:32,940 | INFO     | intersect: 99618072624.97247
[2026-01-31 04:49:18] 2026-01-31 03:48:32,941 | INFO     | chi2: 0.9213125452190732
[2026-01-31 04:49:18] 2026-01-31 03:48:32,941 | INFO     | current chi2=0.9213125452190732 (change=59.08268165654219 %)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,941 | INFO     | sum of square deviations: 412686807.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,942 | INFO     | sum of deviations: -25063189468.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,942 | INFO     | mean x: 1769827967.5
[2026-01-31 04:49:18] 2026-01-31 03:48:32,942 | INFO     | mean y: 2769939.409090909
[2026-01-31 04:49:18] 2026-01-31 03:48:32,942 | INFO     | intersect: 107487508656.4391
[2026-01-31 04:49:18] 2026-01-31 03:48:32,943 | INFO     | chi2: 0.8891116173983784
[2026-01-31 04:49:18] 2026-01-31 03:48:32,943 | INFO     | current chi2=0.8891116173983784 (change=3.4951144416510656 %)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,943 | INFO     | left removable region: 20
[2026-01-31 04:49:18] 2026-01-31 03:48:32,943 | INFO     | sum of square deviations: 218571540.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,944 | INFO     | sum of deviations: -6208919220.999999
[2026-01-31 04:49:18] 2026-01-31 03:48:32,944 | INFO     | mean x: 1769827937.0
[2026-01-31 04:49:18] 2026-01-31 03:48:32,944 | INFO     | mean y: 2762769.797752809
[2026-01-31 04:49:18] 2026-01-31 03:48:32,944 | INFO     | intersect: 50277920715.34764
[2026-01-31 04:49:18] 2026-01-31 03:48:32,945 | INFO     | chi2: 0.10443780280791488
[2026-01-31 04:49:18] 2026-01-31 03:48:32,945 | INFO     | current memory leak: -28.41 B/s (using 89 data points, chi2=0.10)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,945 | INFO     | could have reported an average CPU frequency of 2819 MHz (8 samples)
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | ..............................
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | . Timing measurements:
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | . get job = 0 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | . initial setup = 6 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | . payload setup = 6 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,946 | INFO     | . stage-in = 0 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,947 | INFO     | . payload execution = 7277 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,947 | INFO     | . stage-out = 1 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,947 | INFO     | . log creation = 0 s
[2026-01-31 04:49:18] 2026-01-31 03:48:32,947 | INFO     | ..............................
[2026-01-31 04:49:18] 2026-01-31 03:48:33,093 | INFO     | 
[2026-01-31 04:49:18] 2026-01-31 03:48:33,094 | INFO     | job summary report
[2026-01-31 04:49:18] 2026-01-31 03:48:33,094 | INFO     | --------------------------------------------------
[2026-01-31 04:49:18] 2026-01-31 03:48:33,094 | INFO     | PanDA job id: 6984043268
[2026-01-31 04:49:18] 2026-01-31 03:48:33,094 | INFO     | task id: 48317911
[2026-01-31 04:49:18] 2026-01-31 03:48:33,094 | INFO     | errors: (none)
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | pilot state: finished 
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | transexitcode: 0
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | exeerrorcode: 0
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | exeerrordiag: 
[2026-01-31 04:49:18] 2026-01-31 03:48:33,095 | INFO     | exitcode: 0
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | exitmsg: OK
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | cpuconsumptiontime: 80458 s
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | nevents: 400
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | neventsw: 0
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | pid: 60300
[2026-01-31 04:49:18] 2026-01-31 03:48:33,096 | INFO     | pgrp: 60300
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | corecount: 12
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | event service: False
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | sizes: {0: 2277805, 1: 2278266, 7287: 2305555, 7289: 2314553, 7291: 2314609, 7292: 2314803}
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | --------------------------------------------------
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | 
[2026-01-31 04:49:18] 2026-01-31 03:48:33,097 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-31 04:49:18] 2026-01-31 03:48:33,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,118 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,118 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,118 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 04:49:18] 2026-01-31 03:48:33,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 04:49:18] 2026-01-31 03:48:33,121 | INFO     | job 6984043268 has completed (purged errors)
[2026-01-31 04:49:18] 2026-01-31 03:48:33,121 | INFO     | overall cleanup function is called
[2026-01-31 04:49:18] 2026-01-31 03:48:34,130 | INFO     | --- collectZombieJob: --- 10, [60300]
[2026-01-31 04:49:18] 2026-01-31 03:48:34,131 | INFO     | zombie collector waiting for pid 60300
[2026-01-31 04:49:18] 2026-01-31 03:48:34,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 04:49:18] 2026-01-31 03:48:34,131 | INFO     | collected zombie processes
[2026-01-31 04:49:18] 2026-01-31 03:48:34,131 | INFO     | will attempt to kill all subprocesses of pid=60300
[2026-01-31 04:49:18] 2026-01-31 03:48:34,308 | INFO     | process IDs to be killed: [60300] (in reverse order)
[2026-01-31 04:49:18] 2026-01-31 03:48:34,365 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 04:49:18] 2026-01-31 03:48:34,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 04:49:18] 2026-01-31 03:48:34,372 | INFO     | did not find any defunct processes belonging to 60300
[2026-01-31 04:49:18] 2026-01-31 03:48:34,378 | INFO     | did not find any defunct processes belonging to 60300
[2026-01-31 04:49:18] 2026-01-31 03:48:34,378 | INFO     | ready for new job
[2026-01-31 04:49:18] 2026-01-31 03:48:34,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 04:49:18] 2026-01-31 03:48:34,380 | INFO     | **************************************
[2026-01-31 04:49:18] 2026-01-31 03:48:34,380 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 04:49:18] 2026-01-31 03:48:34,381 | INFO     | **************************************
[2026-01-31 04:49:18] 2026-01-31 03:48:34,381 | INFO     | 
[2026-01-31 04:49:18] 2026-01-31 03:48:34,382 | INFO     | architecture information:
[2026-01-31 04:49:18] 2026-01-31 03:48:34,383 | INFO     | executing command: cat /etc/os-release
[2026-01-31 04:49:18] 2026-01-31 03:48:34,398 | INFO     | cat /etc/os-release:
[2026-01-31 04:49:18] NAME="CentOS Linux"
[2026-01-31 04:49:18] VERSION="7 (Core)"
[2026-01-31 04:49:18] ID="centos"
[2026-01-31 04:49:18] ID_LIKE="rhel fedora"
[2026-01-31 04:49:18] VERSION_ID="7"
[2026-01-31 04:49:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 04:49:18] ANSI_COLOR="0;31"
[2026-01-31 04:49:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 04:49:18] HOME_URL="https://www.centos.org/"
[2026-01-31 04:49:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 04:49:18] 
[2026-01-31 04:49:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 04:49:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 04:49:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 04:49:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 04:49:18] 
[2026-01-31 04:49:18] 2026-01-31 03:48:34,398 | INFO     | **************************************
[2026-01-31 04:49:18] 2026-01-31 03:48:34,902 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-31 04:49:18] 2026-01-31 03:48:34,918 | INFO     | sufficient remaining disk space (1783292231680 B)
[2026-01-31 04:49:18] 2026-01-31 03:48:34,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 04:49:18] 2026-01-31 03:48:34,919 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 04:49:18] 2026-01-31 03:48:34,919 | INFO     | update_server=False
[2026-01-31 04:49:18] 2026-01-31 03:48:34,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 04:49:18] 2026-01-31 03:48:34,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 04:49:18] 2026-01-31 03:48:34,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 04:49:18] 2026-01-31 03:48:35,163 | INFO     | job.realtimelogging is not enabled
[2026-01-31 04:49:18] 2026-01-31 03:48:35,339 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-31 04:49:18] 2026-01-31 03:48:35,339 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-31 04:49:18] 2026-01-31 03:48:35,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 04:49:18] 2026-01-31 03:48:35,340 | INFO     | will abort loop
[2026-01-31 04:49:18] 2026-01-31 03:48:35,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 04:49:18] 2026-01-31 03:48:35,819 | INFO     | all payload control threads have been joined
[2026-01-31 04:49:18] 2026-01-31 03:48:35,844 | INFO     | all data control threads have been joined
[2026-01-31 04:49:18] 2026-01-31 03:48:35,925 | INFO     | [job] retrieve thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:35,925 | INFO     | [job] queue monitor thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:35,972 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,168 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,189 | INFO     | [payload] validate_post thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,345 | INFO     | [job] job monitor thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,372 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,440 | INFO     | [data] copytool_in thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,522 | INFO     | [payload] failed_post thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,624 | INFO     | all job control threads have been joined
[2026-01-31 04:49:18] 2026-01-31 03:48:36,825 | INFO     | [payload] control thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:36,850 | INFO     | [data] control thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:37,018 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:37,165 | INFO     | [job] validate thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:37,505 | INFO     | [data] copytool_out thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:37,629 | INFO     | [job] control thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:48:38,925 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 04:49:18] 2026-01-31 03:49:05,695 | INFO     | PID=54971 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-31 04:49:18] 2026-01-31 03:49:05,696 | INFO     | .. there are 2 such processes running
[2026-01-31 04:49:18] 2026-01-31 03:49:05,696 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 04:49:18] 2026-01-31 03:49:05,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 04:49:18] 2026-01-31 03:49:05,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 04:49:18] 2026-01-31 03:49:11,642 | INFO     | [monitor] cgroup control has ended
[2026-01-31 04:49:18] 2026-01-31 03:49:13,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864115517248)>', '<ExcThread(monitor, started 139863630264064)>']
[2026-01-31 04:49:18] 2026-01-31 03:49:13,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 04:49:18] 2026-01-31 03:49:13,737 | INFO     | [monitor] control thread has ended
[2026-01-31 04:49:18] 2026-01-31 03:49:18,195 | INFO     | all workflow threads have been joined
[2026-01-31 04:49:18] 2026-01-31 03:49:18,195 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 04:49:18] 2026-01-31 03:49:18,195 | INFO     | traces error code: 0
[2026-01-31 04:49:18] 2026-01-31 03:49:18,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 04:49:18] 2026-01-31 03:49:18,308 [wrapper] ==== pilot stdout END ====
[2026-01-31 04:49:18] 2026-01-31 03:49:18,311 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 04:49:18] 2026-01-31 03:49:18,314 [wrapper] pilotpid: 54971
[2026-01-31 04:49:18] 2026-01-31 03:49:18,317 [wrapper] Pilot exit status: 0
[2026-01-31 04:49:18] 2026-01-31 03:49:18,327 [wrapper] pandaids: 6984043268
[2026-01-31 04:49:18] 2026-01-31 03:49:18,364 [wrapper] cleanup supervisor_pilot   95003 54972
[2026-01-31 04:49:18] 2026-01-31 03:49:18,367 [wrapper] Test setup, not cleaning
[2026-01-31 04:49:18] 2026-01-31 03:49:18,370 [wrapper] apfmon messages muted
[2026-01-31 04:49:18] 2026-01-31 03:49:18,372 [wrapper] ==== wrapper stdout END ====
[2026-01-31 04:49:18] 2026-01-31 03:49:18,375 [wrapper] ==== wrapper stderr END ====
[2026-01-31 04:49:18]  *** Error codes and diagnostics ***
[2026-01-31 04:49:18]     "exeErrorCode": 0,
[2026-01-31 04:49:18]     "exeErrorDiag": "",
[2026-01-31 04:49:18]     "pilotErrorCode": 0,
[2026-01-31 04:49:18]     "pilotErrorDiag": "",
[2026-01-31 04:49:18]  *** Listing of results directory ***
[2026-01-31 04:49:18] total 719352
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-31 04:49:18] -rwx------ 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:21 queuedata.json
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc       100 Jan 31 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 04:49:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 02:46 run_atlas
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc       105 Jan 31 02:46 job.xml
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc 530276790 Jan 31 02:46 EVNT.48317909._000016.pool.root.1
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc      6251 Jan 31 02:46 init_data.xml
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc     15845 Jan 31 02:46 start_atlas.sh
[2026-01-31 04:49:18] drwxrwx--x 2 boinc boinc      4096 Jan 31 02:46 shared
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc    597753 Jan 31 02:46 input.tar.gz
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc         0 Jan 31 02:46 boinc_lockfile
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc      2499 Jan 31 02:46 pandaJob.out
[2026-01-31 04:49:18] -rw------- 1 boinc boinc   1010536 Jan 31 02:46 agis_schedconf.cvmfs.json
[2026-01-31 04:49:18] -rw------- 1 boinc boinc   1511668 Jan 31 02:46 agis_ddmendpoints.agis.ALL.json
[2026-01-31 04:49:18] -rw------- 1 boinc boinc       436 Jan 31 02:46 workernode_map.json
[2026-01-31 04:49:18] drwx------ 5 boinc boinc      4096 Jan 31 02:47 pilot3
[2026-01-31 04:49:18] -rw------- 1 boinc boinc 199383456 Jan 31 04:47 HITS.48317911._000617.pool.root.1
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc       530 Jan 31 04:48 boinc_task_state.xml
[2026-01-31 04:49:18] -rw------- 1 boinc boinc        95 Jan 31 04:48 pilot_heartbeat.json
[2026-01-31 04:49:18] -rw------- 1 boinc boinc      1025 Jan 31 04:48 memory_monitor_summary.json
[2026-01-31 04:49:18] -rw------- 1 boinc boinc    462216 Jan 31 04:48 log.48317911._000617.job.log.tgz.1
[2026-01-31 04:49:18] -rw------- 1 boinc boinc      6359 Jan 31 04:48 heartbeat.json
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc      8192 Jan 31 04:49 boinc_mmap_file
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc        27 Jan 31 04:49 wrapper_checkpoint.txt
[2026-01-31 04:49:18] -rw------- 1 boinc boinc      5077 Jan 31 04:49 pilotlog.txt
[2026-01-31 04:49:18] -rw------- 1 boinc boinc   1044295 Jan 31 04:49 log.48317911._000617.job.log.1
[2026-01-31 04:49:18] -rw------- 1 boinc boinc       357 Jan 31 04:49 output.list
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc       620 Jan 31 04:49 runtime_log
[2026-01-31 04:49:18] -rw------- 1 boinc boinc   1525760 Jan 31 04:49 result.tar.gz
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc      8840 Jan 31 04:49 runtime_log.err
[2026-01-31 04:49:18] -rw------- 1 boinc boinc       658 Jan 31 04:49 5pILDm59T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmef2KDmvVJTym.diag
[2026-01-31 04:49:18] -rw-r--r-- 1 boinc boinc     20954 Jan 31 04:49 stderr.txt
[2026-01-31 04:49:18] HITS file was successfully produced:
[2026-01-31 04:49:18] -rw------- 1 boinc boinc 199383456 Jan 31 04:47 shared/HITS.pool.root.1
[2026-01-31 04:49:18]  *** Contents of shared directory: ***
[2026-01-31 04:49:18] total 714664
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc 530276790 Jan 31 02:46 ATLAS.root_0
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc     15845 Jan 31 02:46 start_atlas.sh
[2026-01-31 04:49:18] -rw-r--r-- 2 boinc boinc    597753 Jan 31 02:46 input.tar.gz
[2026-01-31 04:49:18] -rw------- 1 boinc boinc 199383456 Jan 31 04:47 HITS.pool.root.1
[2026-01-31 04:49:18] -rw------- 1 boinc boinc   1525760 Jan 31 04:49 result.tar.gz
04:49:19 (50803): run_atlas exited; CPU time 80614.279037
04:49:19 (50803): called boinc_finish(0)

</stderr_txt>
]]>

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