Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:48:28 (2960621): wrapper (7.7.26015): starting
07:48:28 (2960621): wrapper: running run_atlas (--nthreads 3)
[2026-01-31 07:48:28] Arguments: --nthreads 3
[2026-01-31 07:48:28] Threads: 3
[2026-01-31 07:48:28] Checking for CVMFS
[2026-01-31 07:48:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 07:48:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 07:48:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 07:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 07:48:29] 2.9.2.0 2679616 1908 61944 155704 3 50 18435452 36864000 0 130560 0 802626 99.983 67936 20630 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-31 07:48:29] CVMFS is ok
[2026-01-31 07:48:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 07:48:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 07:48:29] Further information can be found at the LHC@home message board.
[2026-01-31 07:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 07:48:29] Checking for apptainer binary...
[2026-01-31 07:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 07:48:29] Running /usr/bin/apptainer --version
[2026-01-31 07:48:29] apptainer version 1.4.1-1.1
[2026-01-31 07:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 07:48:29] magicA244b
[2026-01-31 07:48:29] apptainer works
[2026-01-31 07:48:29] Set ATHENA_PROC_NUMBER=3
[2026-01-31 07:48:29] Set ATHENA_CORE_NUMBER=3
[2026-01-31 07:48:29] Starting ATLAS job with PandaID=6985638069
[2026-01-31 07:48:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 09:21:58]  *** The last 200 lines of the pilot log: ***
[2026-01-31 09:21:58] 2026-01-31 08:20:56,821 | INFO     | aborting loop
[2026-01-31 09:21:58] 2026-01-31 08:20:56,837 | INFO     | [job] retrieve thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:56,838 | INFO     | [job] queue monitor thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:56,849 | INFO     | [job] validate thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:56,906 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:56,925 | INFO     | [payload] control thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:57,018 | INFO     | [data] control thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:57,120 | INFO     | [data] copytool_in thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:57,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 09:21:58] 2026-01-31 08:20:57,290 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:57,341 | INFO     | all job control threads have been joined
[2026-01-31 09:21:58] 2026-01-31 08:20:57,593 | INFO     | [payload] failed_post thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:57,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 09:21:58] 2026-01-31 08:20:57,827 | INFO     | [job] job monitor thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:58,170 | INFO     | [payload] validate_post thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:58,323 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:58,347 | INFO     | [job] control thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:20:59,272 | INFO     | [data] copytool_out thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:21:01,797 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:21:06,780 | INFO     | job.realtimelogging is not enabled
[2026-01-31 09:21:58] 2026-01-31 08:21:07,786 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 09:21:58] 2026-01-31 08:21:26,699 | INFO     | PID=2964664 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 09:21:58] 2026-01-31 08:21:26,699 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 09:21:58] 2026-01-31 08:21:26,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 09:21:58] 2026-01-31 08:21:26,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 09:21:58] 2026-01-31 08:21:53,032 | INFO     | [monitor] cgroup control has ended
[2026-01-31 09:21:58] 2026-01-31 08:21:53,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166505412416)>', '<ExcThread(monitor, started 140165787940608)>']
[2026-01-31 09:21:58] 2026-01-31 08:21:53,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 09:21:58] 2026-01-31 08:21:53,843 | INFO     | [monitor] control thread has ended
[2026-01-31 09:21:58] 2026-01-31 08:21:58,695 | INFO     | all workflow threads have been joined
[2026-01-31 09:21:58] 2026-01-31 08:21:58,696 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 09:21:58] 2026-01-31 08:21:58,696 | INFO     | traces error code: 0
[2026-01-31 09:21:58] 2026-01-31 08:21:58,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 09:21:58] 2026-01-31 08:21:58,743 [wrapper] ==== pilot stdout END ====
[2026-01-31 09:21:58] 2026-01-31 08:21:58,747 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 09:21:58] 2026-01-31 08:21:58,749 [wrapper] pilotpid: 2964664
[2026-01-31 09:21:58] 2026-01-31 08:21:58,752 [wrapper] Pilot exit status: 0
[2026-01-31 09:21:58] 2026-01-31 08:21:58,759 [wrapper] pandaids: 6985638069
[2026-01-31 09:21:58] 2026-01-31 08:21:58,777 [wrapper] cleanup supervisor_pilot 2974370 2964665
[2026-01-31 09:21:58] 2026-01-31 08:21:58,780 [wrapper] Test setup, not cleaning
[2026-01-31 09:21:58] 2026-01-31 08:21:58,782 [wrapper] apfmon messages muted
[2026-01-31 09:21:58] 2026-01-31 08:21:58,785 [wrapper] ==== wrapper stdout END ====
[2026-01-31 09:21:58] 2026-01-31 08:21:58,788 [wrapper] ==== wrapper stderr END ====
[2026-01-31 09:21:58]  *** Error codes and diagnostics ***
[2026-01-31 09:21:58]     "exeErrorCode": 0,
[2026-01-31 09:21:58]     "exeErrorDiag": "",
[2026-01-31 09:21:58]     "pilotErrorCode": 0,
[2026-01-31 09:21:58]     "pilotErrorDiag": "",
[2026-01-31 09:21:58]  *** Listing of results directory ***
[2026-01-31 09:21:58] total 674088
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc    584422 Jan 30 11:51 pilot3.tar.gz
[2026-01-31 09:21:58] -rwx------ 1 boinc boinc     36322 Jan 30 11:55 runpilot2-wrapper.sh
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      5111 Jan 30 11:59 queuedata.json
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc       100 Jan 31 07:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 09:21:58] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 07:48 run_atlas
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc       105 Jan 31 07:48 job.xml
[2026-01-31 09:21:58] -rw-r--r-- 2 boinc boinc 500263465 Jan 31 07:48 EVNT.48318008._000108.pool.root.1
[2026-01-31 09:21:58] -rw-r--r-- 2 boinc boinc    597752 Jan 31 07:48 input.tar.gz
[2026-01-31 09:21:58] -rw-r--r-- 2 boinc boinc     15845 Jan 31 07:48 start_atlas.sh
[2026-01-31 09:21:58] drwxrwx--x 2 boinc boinc      4096 Jan 31 07:48 shared
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc         0 Jan 31 07:48 boinc_setup_complete
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      6199 Jan 31 07:48 init_data.xml
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc         0 Jan 31 07:48 boinc_lockfile
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      2524 Jan 31 07:48 pandaJob.out
[2026-01-31 09:21:58] -rw------- 1 boinc boinc   1010528 Jan 31 07:48 agis_schedconf.cvmfs.json
[2026-01-31 09:21:58] -rw------- 1 boinc boinc   1511668 Jan 31 07:48 agis_ddmendpoints.agis.ALL.json
[2026-01-31 09:21:58] -rw------- 1 boinc boinc       430 Jan 31 07:48 workernode_map.json
[2026-01-31 09:21:58] drwx------ 5 boinc boinc      4096 Jan 31 07:48 pilot3
[2026-01-31 09:21:58] -rw------- 1 boinc boinc 183905904 Jan 31 09:20 HITS.48318010._005704.pool.root.1
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc       530 Jan 31 09:20 boinc_task_state.xml
[2026-01-31 09:21:58] -rw------- 1 boinc boinc      1020 Jan 31 09:20 memory_monitor_summary.json
[2026-01-31 09:21:58] -rw------- 1 boinc boinc    282069 Jan 31 09:20 log.48318010._005704.job.log.tgz.1
[2026-01-31 09:21:58] -rw------- 1 boinc boinc      6339 Jan 31 09:20 heartbeat.json
[2026-01-31 09:21:58] -rw------- 1 boinc boinc        95 Jan 31 09:21 pilot_heartbeat.json
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      8192 Jan 31 09:21 boinc_mmap_file
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc        27 Jan 31 09:21 wrapper_checkpoint.txt
[2026-01-31 09:21:58] -rw------- 1 boinc boinc      4820 Jan 31 09:21 pilotlog.txt
[2026-01-31 09:21:58] -rw------- 1 boinc boinc    806549 Jan 31 09:21 log.48318010._005704.job.log.1
[2026-01-31 09:21:58] -rw------- 1 boinc boinc       357 Jan 31 09:21 output.list
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc       620 Jan 31 09:21 runtime_log
[2026-01-31 09:21:58] -rw------- 1 boinc boinc   1105920 Jan 31 09:21 result.tar.gz
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      8916 Jan 31 09:21 runtime_log.err
[2026-01-31 09:21:58] -rw------- 1 boinc boinc       661 Jan 31 09:21 5psLDm7K158nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlDLKDm5NAGsn.diag
[2026-01-31 09:21:58] -rw-r--r-- 1 boinc boinc      6831 Jan 31 09:21 stderr.txt
[2026-01-31 09:21:59] HITS file was successfully produced:
[2026-01-31 09:21:59] -rw------- 1 boinc boinc 183905904 Jan 31 09:20 shared/HITS.pool.root.1
[2026-01-31 09:21:59]  *** Contents of shared directory: ***
[2026-01-31 09:21:59] total 669824
[2026-01-31 09:21:59] -rw-r--r-- 2 boinc boinc 500263465 Jan 31 07:48 ATLAS.root_0
[2026-01-31 09:21:59] -rw-r--r-- 2 boinc boinc    597752 Jan 31 07:48 input.tar.gz
[2026-01-31 09:21:59] -rw-r--r-- 2 boinc boinc     15845 Jan 31 07:48 start_atlas.sh
[2026-01-31 09:21:59] -rw------- 1 boinc boinc 183905904 Jan 31 09:20 HITS.pool.root.1
[2026-01-31 09:21:59] -rw------- 1 boinc boinc   1105920 Jan 31 09:21 result.tar.gz
09:22:01 (2960621): run_atlas exited; CPU time 15850.752112
09:22:01 (2960621): called boinc_finish(0)

</stderr_txt>
]]>

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