Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:10 (2795740): wrapper (7.7.26015): starting
05:45:10 (2795740): wrapper: running run_atlas (--nthreads 3)
[2026-01-31 05:45:10] Arguments: --nthreads 3
[2026-01-31 05:45:10] Threads: 3
[2026-01-31 05:45:10] Checking for CVMFS
[2026-01-31 05:45:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 05:45:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 05:45:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 05:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 05:45:11] 2.9.2.0 2223857 3712 84044 155702 2 50 35340586 36864001 0 130560 0 1642211 99.986 114128 12522 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-31 05:45:11] CVMFS is ok
[2026-01-31 05:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 05:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 05:45:11] Further information can be found at the LHC@home message board.
[2026-01-31 05:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 05:45:11] Checking for apptainer binary...
[2026-01-31 05:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 05:45:11] Running /usr/bin/apptainer --version
[2026-01-31 05:45:11] apptainer version 1.4.1-1.1
[2026-01-31 05:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 05:45:11] legendA257
[2026-01-31 05:45:11] apptainer works
[2026-01-31 05:45:11] Set ATHENA_PROC_NUMBER=3
[2026-01-31 05:45:11] Set ATHENA_CORE_NUMBER=3
[2026-01-31 05:45:11] Starting ATLAS job with PandaID=6977594785
[2026-01-31 05:45:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 07:00:36]  *** The last 200 lines of the pilot log: ***
[2026-01-31 07:00:36]  replicas=None
[2026-01-31 07:00:36]  scope=mc23_13p6TeV
[2026-01-31 07:00:36]  status=None
[2026-01-31 07:00:36]  status_code=0
[2026-01-31 07:00:36]  storage_token=
[2026-01-31 07:00:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6977594785/log.48298340._000467.job.log.tgz.1
[2026-01-31 07:00:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/b4/log.48298340._000467.job.log.tgz.1
[2026-01-31 07:00:36]  workdir=None
[2026-01-31 07:00:36] ]
[2026-01-31 07:00:36] 2026-01-31 06:00:01,786 | INFO     | transferring file log.48298340._000467.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6977594785/log.48298340._000467.job.log.tgz.1 to /local/data/boinc/
[2026-01-31 07:00:36] 2026-01-31 06:00:01,786 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6977594785/log.48298340._000467.job.log.tgz.1 /local/data/boinc/slots/0/log.48298340._0004
[2026-01-31 07:00:36] 2026-01-31 06:00:01,798 | INFO     | adding to output.list: log.48298340._000467.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/b4/log.48298340._000467.job.log.tg
[2026-01-31 07:00:36] 2026-01-31 06:00:01,799 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-31 07:00:36] 2026-01-31 06:00:01,799 | INFO     | summary of transferred files:
[2026-01-31 07:00:36] 2026-01-31 06:00:01,799 | INFO     |  -- lfn=log.48298340._000467.job.log.tgz.1, status_code=0, status=transferred
[2026-01-31 07:00:36] 2026-01-31 06:00:01,799 | INFO     | stage-out finished correctly
[2026-01-31 07:00:36] 2026-01-31 06:00:02,970 | INFO     | time since job start (4482s) is within the limit (349056.0s)
[2026-01-31 07:00:36] 2026-01-31 06:00:03,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-31 07:00:36] 2026-01-31 06:00:04,693 | INFO     | job 6977594785 has state=finished
[2026-01-31 07:00:36] 2026-01-31 06:00:04,693 | INFO     | preparing for final server update for job 6977594785 in state='finished'
[2026-01-31 07:00:36] 2026-01-31 06:00:04,693 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6977594785/jobReport.json
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | this job has now completed (state=finished)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | log transfer has been attempted: DONE
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | job 6977594785 has finished - writing final server update
[2026-01-31 07:00:36] 2026-01-31 06:00:04,695 | INFO     | total number of processed events: 400 (read)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,696 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6977594785/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,696 | INFO     | extracted standard info from prmon json
[2026-01-31 07:00:36] 2026-01-31 06:00:04,696 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 07:00:36] 2026-01-31 06:00:04,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 07:00:36] 2026-01-31 06:00:04,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 07:00:36] 2026-01-31 06:00:04,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 07:00:36] 2026-01-31 06:00:04,697 | INFO     | fitting pss+swap vs Time
[2026-01-31 07:00:36] 2026-01-31 06:00:04,697 | INFO     | sum of square deviations: 93240818.0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | sum of deviations: -10676972191.0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | mean x: 1769837055.0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | mean y: 2476982.4925373136
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | intersect: 202665875096.78555
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | chi2: 0.08192567560784669
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | current memory leak: -114.51 B/s (using 67 data points, chi2=0.08)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | could have reported an average CPU frequency of 3765 MHz (6 samples)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | ..............................
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . Timing measurements:
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . get job = 0 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . initial setup = 3 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . payload setup = 2 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . stage-in = 0 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . payload execution = 4463 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . stage-out = 0 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | . log creation = 0 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,698 | INFO     | ..............................
[2026-01-31 07:00:36] 2026-01-31 06:00:04,727 | INFO     | 
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | job summary report
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | --------------------------------------------------
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | PanDA job id: 6977594785
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | task id: 48298340
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | errors: (none)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | pilot state: finished 
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | transexitcode: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | exeerrorcode: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | exeerrordiag: 
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | exitcode: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | exitmsg: OK
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | cpuconsumptiontime: 12798 s
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | nevents: 400
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | neventsw: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | pid: 2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | pgrp: 2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | corecount: 3
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | event service: False
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | sizes: {0: 2278234, 1: 2278496, 11: 2278524, 4469: 2304809, 4470: 2313813, 4472: 2313869, 4473: 2314191}
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | --------------------------------------------------
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | 
[2026-01-31 07:00:36] 2026-01-31 06:00:04,728 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | job 6977594785 has completed (purged errors)
[2026-01-31 07:00:36] 2026-01-31 06:00:04,741 | INFO     | overall cleanup function is called
[2026-01-31 07:00:36] 2026-01-31 06:00:05,747 | INFO     | --- collectZombieJob: --- 10, [2804198]
[2026-01-31 07:00:36] 2026-01-31 06:00:05,747 | INFO     | zombie collector waiting for pid 2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:05,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 07:00:36] 2026-01-31 06:00:05,748 | INFO     | collected zombie processes
[2026-01-31 07:00:36] 2026-01-31 06:00:05,748 | INFO     | will attempt to kill all subprocesses of pid=2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:05,788 | INFO     | process IDs to be killed: [2804198] (in reverse order)
[2026-01-31 07:00:36] 2026-01-31 06:00:05,812 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 07:00:36] 2026-01-31 06:00:05,812 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 07:00:36] 2026-01-31 06:00:05,813 | INFO     | did not find any defunct processes belonging to 2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:05,814 | INFO     | did not find any defunct processes belonging to 2804198
[2026-01-31 07:00:36] 2026-01-31 06:00:05,814 | INFO     | ready for new job
[2026-01-31 07:00:36] 2026-01-31 06:00:05,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | **************************************
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | **************************************
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | 
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | architecture information:
[2026-01-31 07:00:36] 2026-01-31 06:00:05,815 | INFO     | executing command: cat /etc/os-release
[2026-01-31 07:00:36] 2026-01-31 06:00:05,824 | INFO     | cat /etc/os-release:
[2026-01-31 07:00:36] NAME="CentOS Linux"
[2026-01-31 07:00:36] VERSION="7 (Core)"
[2026-01-31 07:00:36] ID="centos"
[2026-01-31 07:00:36] ID_LIKE="rhel fedora"
[2026-01-31 07:00:36] VERSION_ID="7"
[2026-01-31 07:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 07:00:36] ANSI_COLOR="0;31"
[2026-01-31 07:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 07:00:36] HOME_URL="https://www.centos.org/"
[2026-01-31 07:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 07:00:36] 
[2026-01-31 07:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 07:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 07:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 07:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 07:00:36] 
[2026-01-31 07:00:36] 2026-01-31 06:00:05,824 | INFO     | **************************************
[2026-01-31 07:00:36] 2026-01-31 06:00:06,324 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-31 07:00:36] 2026-01-31 06:00:06,335 | INFO     | sufficient remaining disk space (322748547072 B)
[2026-01-31 07:00:36] 2026-01-31 06:00:06,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 07:00:36] 2026-01-31 06:00:06,336 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 07:00:36] 2026-01-31 06:00:06,336 | INFO     | update_server=False
[2026-01-31 07:00:36] 2026-01-31 06:00:06,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 07:00:36] 2026-01-31 06:00:06,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 07:00:36] 2026-01-31 06:00:06,949 | WARNING  | process 2804198 can no longer be monitored (due to stat problems) - aborting
[2026-01-31 07:00:36] 2026-01-31 06:00:06,977 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 07:00:36] 2026-01-31 06:00:06,978 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 07:00:36] 2026-01-31 06:00:06,978 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-31 07:00:36] 2026-01-31 06:00:06,978 | WARNING  | maxPSS not found in memory monitor output
[2026-01-31 07:00:36] 2026-01-31 06:00:06,978 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6977594785/payload.stdout) since it has not been created yet
[2026-01-31 07:00:36] 2026-01-31 06:00:06,978 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-31 07:00:36] 2026-01-31 06:00:06,988 | INFO     | sufficient remaining disk space (322748547072 B)
[2026-01-31 07:00:36] 2026-01-31 06:00:06,988 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-31 07:00:36] 2026-01-31 06:00:06,988 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6977594785/HITS.48298340._000467.pool.root.1 since it does not exist
[2026-01-31 07:00:36] 2026-01-31 06:00:07,025 | INFO     | number of running child processes to parent process 2804198: 1
[2026-01-31 07:00:36] 2026-01-31 06:00:07,025 | INFO     | maximum number of monitored processes: 6
[2026-01-31 07:00:36] 2026-01-31 06:00:07,025 | INFO     | aborting job monitoring since job object (job id=6977594785) has expired
[2026-01-31 07:00:36] 2026-01-31 06:00:07,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 07:00:36] 2026-01-31 06:00:07,025 | INFO     | will abort loop
[2026-01-31 07:00:36] 2026-01-31 06:00:07,199 | INFO     | all payload control threads have been joined
[2026-01-31 07:00:36] 2026-01-31 06:00:07,313 | INFO     | all data control threads have been joined
[2026-01-31 07:00:36] 2026-01-31 06:00:07,318 | INFO     | all job control threads have been joined
[2026-01-31 07:00:36] 2026-01-31 06:00:07,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 07:00:36] 2026-01-31 06:00:07,340 | INFO     | [job] retrieve thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:07,341 | INFO     | [job] queue monitor thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:07,486 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:07,916 | INFO     | [payload] validate_post thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:07,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,031 | INFO     | [job] job monitor thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,201 | INFO     | [payload] control thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,290 | INFO     | [payload] failed_post thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,319 | INFO     | [data] control thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,323 | INFO     | [job] control thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,556 | INFO     | [job] validate thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,576 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,691 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:08,832 | INFO     | [data] copytool_in thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:09,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 07:00:36] 2026-01-31 06:00:09,340 | INFO     | [data] copytool_out thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:13,142 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 07:00:36] 2026-01-31 06:00:17,100 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-31 07:00:36] 2026-01-31 06:00:25,707 | INFO     | [monitor] cgroup control has ended
[2026-01-31 07:00:36] 2026-01-31 06:00:27,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887579572032)>', '<ExcThread(monitor, started 139886774429440)>']
[2026-01-31 07:00:36] 2026-01-31 06:00:32,412 | INFO     | all workflow threads have been joined
[2026-01-31 07:00:36] 2026-01-31 06:00:32,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 07:00:36] 2026-01-31 06:00:32,413 | INFO     | traces error code: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:32,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 07:00:36] 2026-01-31 06:00:36,077 | INFO     | PID=2799781 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-31 07:00:36] 2026-01-31 06:00:36,077 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 07:00:36] 2026-01-31 06:00:36,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 07:00:36] 2026-01-31 06:00:36,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 07:00:36] 2026-01-31 06:00:36,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 07:00:36] 2026-01-31 06:00:36,078 | INFO     | [monitor] control thread has ended
[2026-01-31 07:00:36] 2026-01-31 06:00:36,124 [wrapper] ==== pilot stdout END ====
[2026-01-31 07:00:36] 2026-01-31 06:00:36,126 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 07:00:36] 2026-01-31 06:00:36,129 [wrapper] pilotpid: 2799781
[2026-01-31 07:00:36] 2026-01-31 06:00:36,131 [wrapper] Pilot exit status: 0
[2026-01-31 07:00:36] 2026-01-31 06:00:36,138 [wrapper] pandaids: 6977594785
[2026-01-31 07:00:36] 2026-01-31 06:00:36,154 [wrapper] cleanup supervisor_pilot 2810176 2799782
[2026-01-31 07:00:36] 2026-01-31 06:00:36,156 [wrapper] Test setup, not cleaning
[2026-01-31 07:00:36] 2026-01-31 06:00:36,158 [wrapper] apfmon messages muted
[2026-01-31 07:00:36] 2026-01-31 06:00:36,161 [wrapper] ==== wrapper stdout END ====
[2026-01-31 07:00:36] 2026-01-31 06:00:36,163 [wrapper] ==== wrapper stderr END ====
[2026-01-31 07:00:36]  *** Error codes and diagnostics ***
[2026-01-31 07:00:36]     "exeErrorCode": 0,
[2026-01-31 07:00:36]     "exeErrorDiag": "",
[2026-01-31 07:00:36]     "pilotErrorCode": 0,
[2026-01-31 07:00:36]     "pilotErrorDiag": "",
[2026-01-31 07:00:36]  *** Listing of results directory ***
[2026-01-31 07:00:36] total 415460
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc    584422 Jan 22 13:45 pilot3.tar.gz
[2026-01-31 07:00:36] -rwx------ 1 boinc boinc     36322 Jan 22 13:48 runpilot2-wrapper.sh
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc      5111 Jan 22 13:52 queuedata.json
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc       100 Jan 31 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 07:00:36] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 05:45 run_atlas
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc       105 Jan 31 05:45 job.xml
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc 256928227 Jan 31 05:45 EVNT.48298337._000010.pool.root.1
[2026-01-31 07:00:36] drwxrwx--x 2 boinc boinc      4096 Jan 31 05:45 shared
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc    597799 Jan 31 05:45 input.tar.gz
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc     15845 Jan 31 05:45 start_atlas.sh
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc         0 Jan 31 05:45 boinc_setup_complete
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc      6443 Jan 31 05:45 init_data.xml
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc         0 Jan 31 05:45 boinc_lockfile
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc      2706 Jan 31 05:45 pandaJob.out
[2026-01-31 07:00:36] -rw------- 1 boinc boinc   1010520 Jan 31 05:45 agis_schedconf.cvmfs.json
[2026-01-31 07:00:36] -rw------- 1 boinc boinc   1511668 Jan 31 05:45 agis_ddmendpoints.agis.ALL.json
[2026-01-31 07:00:36] -rw------- 1 boinc boinc       430 Jan 31 05:45 workernode_map.json
[2026-01-31 07:00:36] drwx------ 5 boinc boinc      4096 Jan 31 05:45 pilot3
[2026-01-31 07:00:36] -rw------- 1 boinc boinc        95 Jan 31 06:59 pilot_heartbeat.json
[2026-01-31 07:00:36] -rw------- 1 boinc boinc 162736827 Jan 31 06:59 HITS.48298340._000467.pool.root.1
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc       529 Jan 31 06:59 boinc_task_state.xml
[2026-01-31 07:00:36] -rw------- 1 boinc boinc      1022 Jan 31 06:59 memory_monitor_summary.json
[2026-01-31 07:00:36] -rw------- 1 boinc boinc    253281 Jan 31 07:00 log.48298340._000467.job.log.tgz.1
[2026-01-31 07:00:36] -rw------- 1 boinc boinc      6320 Jan 31 07:00 heartbeat.json
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc      8192 Jan 31 07:00 boinc_mmap_file
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc        27 Jan 31 07:00 wrapper_checkpoint.txt
[2026-01-31 07:00:36] -rw------- 1 boinc boinc       747 Jan 31 07:00 pilotlog.txt
[2026-01-31 07:00:36] -rw------- 1 boinc boinc    662779 Jan 31 07:00 log.48298340._000467.job.log.1
[2026-01-31 07:00:36] -rw------- 1 boinc boinc       357 Jan 31 07:00 output.list
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc       620 Jan 31 07:00 runtime_log
[2026-01-31 07:00:36] -rw------- 1 boinc boinc    931840 Jan 31 07:00 result.tar.gz
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc      8916 Jan 31 07:00 runtime_log.err
[2026-01-31 07:00:36] -rw------- 1 boinc boinc       661 Jan 31 07:00 MmMLDmtH928n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgxtKDmJTvi1m.diag
[2026-01-31 07:00:36] -rw-r--r-- 1 boinc boinc     22055 Jan 31 07:00 stderr.txt
[2026-01-31 07:00:36] HITS file was successfully produced:
[2026-01-31 07:00:36] -rw------- 1 boinc boinc 162736827 Jan 31 06:59 shared/HITS.pool.root.1
[2026-01-31 07:00:36]  *** Contents of shared directory: ***
[2026-01-31 07:00:36] total 411352
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc 256928227 Jan 31 05:45 ATLAS.root_0
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc    597799 Jan 31 05:45 input.tar.gz
[2026-01-31 07:00:36] -rw-r--r-- 2 boinc boinc     15845 Jan 31 05:45 start_atlas.sh
[2026-01-31 07:00:36] -rw------- 1 boinc boinc 162736827 Jan 31 06:59 HITS.pool.root.1
[2026-01-31 07:00:36] -rw------- 1 boinc boinc    931840 Jan 31 07:00 result.tar.gz
07:00:37 (2795740): run_atlas exited; CPU time 12817.714106
07:00:37 (2795740): called boinc_finish(0)

</stderr_txt>
]]>

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