Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:29:26 (877707): wrapper (7.7.26015): starting
12:29:26 (877707): wrapper: running run_atlas (--nthreads 10)
[2026-01-30 12:29:26] Arguments: --nthreads 10
[2026-01-30 12:29:26] Threads: 10
[2026-01-30 12:29:26] Checking for CVMFS
[2026-01-30 12:29:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 12:29:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 12:29:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 12:29:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 12:29:27] 2.13.3.0 10223 123929 301260 155686 0 691 32015302 40960001 60025 16776704 0 1378441156 99.709 1062676971 50084 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-30 12:29:27] CVMFS is ok
[2026-01-30 12:29:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 12:29:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 12:29:27] Further information can be found at the LHC@home message board.
[2026-01-30 12:29:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 12:29:27] Checking for apptainer binary...
[2026-01-30 12:29:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 12:29:27] Running /usr/bin/apptainer --version
[2026-01-30 12:29:27] apptainer version 1.4.5-2.el9
[2026-01-30 12:29:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 12:29:28] c8-7-6.aglt2.org
[2026-01-30 12:29:28] apptainer works
[2026-01-30 12:29:28] Set ATHENA_PROC_NUMBER=10
[2026-01-30 12:29:28] Set ATHENA_CORE_NUMBER=10
[2026-01-30 12:29:28] Starting ATLAS job with PandaID=6985836336
[2026-01-30 12:29:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 13:48:51]  *** The last 200 lines of the pilot log: ***
[2026-01-30 13:48:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-30 13:48:51]  is_altstaged=None
[2026-01-30 13:48:51]  is_tar=False
[2026-01-30 13:48:51]  lfn=log.48318010._006369.job.log.tgz.1
[2026-01-30 13:48:51]  mtime=0
[2026-01-30 13:48:51]  protocol_id=None
[2026-01-30 13:48:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-30 13:48:51]  replicas=None
[2026-01-30 13:48:51]  scope=mc23_13p6TeV
[2026-01-30 13:48:51]  status=None
[2026-01-30 13:48:51]  status_code=0
[2026-01-30 13:48:51]  storage_token=
[2026-01-30 13:48:51]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6985836336/log.48318010._006369.job.log.tgz.1
[2026-01-30 13:48:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/4e/log.48318010._006369.job.log.tgz.1
[2026-01-30 13:48:51]  workdir=None
[2026-01-30 13:48:51] ]
[2026-01-30 13:48:51] 2026-01-30 18:48:10,041 | INFO     | transferring file log.48318010._006369.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6985836336/log.48318010._006369.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-30 13:48:51] 2026-01-30 18:48:10,042 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6985836336/log.48318010._006369.job.log.tgz.1 /tmp/boinchome/slots/1/log.48318010._006369.job
[2026-01-30 13:48:51] 2026-01-30 18:48:10,273 | INFO     | adding to output.list: log.48318010._006369.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/4e/log.48318010._006369.job.log.tg
[2026-01-30 13:48:51] 2026-01-30 18:48:10,274 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-30 13:48:51] 2026-01-30 18:48:10,274 | INFO     | summary of transferred files:
[2026-01-30 13:48:51] 2026-01-30 18:48:10,274 | INFO     |  -- lfn=log.48318010._006369.job.log.tgz.1, status_code=0, status=transferred
[2026-01-30 13:48:51] 2026-01-30 18:48:10,274 | INFO     | stage-out finished correctly
[2026-01-30 13:48:51] 2026-01-30 18:48:10,353 | INFO     | time since job start (4657s) is within the limit (349056.0s)
[2026-01-30 13:48:51] 2026-01-30 18:48:10,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-30 13:48:51] 2026-01-30 18:48:12,360 | INFO     | time since job start (4659s) is within the limit (349056.0s)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,065 | INFO     | job 6985836336 has state=finished
[2026-01-30 13:48:51] 2026-01-30 18:48:13,065 | INFO     | preparing for final server update for job 6985836336 in state='finished'
[2026-01-30 13:48:51] 2026-01-30 18:48:13,065 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6985836336/jobReport.json
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | this job has now completed (state=finished)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | log transfer has been attempted: DONE
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | job 6985836336 has finished - writing final server update
[2026-01-30 13:48:51] 2026-01-30 18:48:13,067 | INFO     | total number of processed events: 400 (read)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,115 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6985836336/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,116 | INFO     | extracted standard info from prmon json
[2026-01-30 13:48:51] 2026-01-30 18:48:13,116 | INFO     | extracted standard memory fields from prmon json
[2026-01-30 13:48:51] 2026-01-30 18:48:13,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-30 13:48:51] 2026-01-30 18:48:13,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 13:48:51] 2026-01-30 18:48:13,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 13:48:51] 2026-01-30 18:48:13,117 | INFO     | fitting pss+swap vs Time
[2026-01-30 13:48:51] 2026-01-30 18:48:13,117 | INFO     | sum of square deviations: 101836454.86956538
[2026-01-30 13:48:51] 2026-01-30 18:48:13,117 | INFO     | sum of deviations: -1384276740.826087
[2026-01-30 13:48:51] 2026-01-30 18:48:13,117 | INFO     | mean x: 1769796668.0434783
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | mean y: 2618272.6086956523
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | intersect: 24059704378.97376
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | chi2: 0.05080016375625514
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | current memory leak: -13.59 B/s (using 69 data points, chi2=0.05)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | ..............................
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . Timing measurements:
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . get job = 0 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . initial setup = 22 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . payload setup = 28 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . stage-in = 0 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . payload execution = 4621 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . stage-out = 2 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | . log creation = 1 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,118 | INFO     | ..............................
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | 
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | job summary report
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | --------------------------------------------------
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | PanDA job id: 6985836336
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | task id: 48318010
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | errors: (none)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | pilot state: finished 
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | transexitcode: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | exeerrorcode: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | exeerrordiag: 
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | exitcode: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | exitmsg: OK
[2026-01-30 13:48:51] 2026-01-30 18:48:13,336 | INFO     | cpuconsumptiontime: 22457 s
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | nevents: 400
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | neventsw: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | pid: 895595
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | pgrp: 895595
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | corecount: 10
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | event service: False
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | sizes: {0: 2277841, 1: 2278302, 4652: 2304401, 4655: 2313399, 4656: 2313455, 4658: 2313649}
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | --------------------------------------------------
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | 
[2026-01-30 13:48:51] 2026-01-30 18:48:13,337 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-30 13:48:51] 2026-01-30 18:48:13,659 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,659 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,659 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | job 6985836336 has completed (purged errors)
[2026-01-30 13:48:51] 2026-01-30 18:48:13,660 | INFO     | overall cleanup function is called
[2026-01-30 13:48:51] 2026-01-30 18:48:14,687 | INFO     | --- collectZombieJob: --- 10, [895595]
[2026-01-30 13:48:51] 2026-01-30 18:48:14,687 | INFO     | zombie collector waiting for pid 895595
[2026-01-30 13:48:51] 2026-01-30 18:48:14,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 13:48:51] 2026-01-30 18:48:14,687 | INFO     | collected zombie processes
[2026-01-30 13:48:51] 2026-01-30 18:48:14,687 | INFO     | will attempt to kill all subprocesses of pid=895595
[2026-01-30 13:48:51] 2026-01-30 18:48:17,579 | INFO     | process IDs to be killed: [895595] (in reverse order)
[2026-01-30 13:48:51] 2026-01-30 18:48:17,998 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 13:48:51] 2026-01-30 18:48:17,998 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 13:48:51] 2026-01-30 18:48:18,121 | INFO     | did not find any defunct processes belonging to 895595
[2026-01-30 13:48:51] 2026-01-30 18:48:18,225 | INFO     | did not find any defunct processes belonging to 895595
[2026-01-30 13:48:51] 2026-01-30 18:48:18,225 | INFO     | ready for new job
[2026-01-30 13:48:51] 2026-01-30 18:48:18,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 13:48:51] 2026-01-30 18:48:18,226 | INFO     | **************************************
[2026-01-30 13:48:51] 2026-01-30 18:48:18,226 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 13:48:51] 2026-01-30 18:48:18,226 | INFO     | **************************************
[2026-01-30 13:48:51] 2026-01-30 18:48:18,226 | INFO     | 
[2026-01-30 13:48:51] 2026-01-30 18:48:18,241 | INFO     | architecture information:
[2026-01-30 13:48:51] 2026-01-30 18:48:18,253 | INFO     | executing command: cat /etc/os-release
[2026-01-30 13:48:51] 2026-01-30 18:48:18,294 | INFO     | cat /etc/os-release:
[2026-01-30 13:48:51] NAME="CentOS Linux"
[2026-01-30 13:48:51] VERSION="7 (Core)"
[2026-01-30 13:48:51] ID="centos"
[2026-01-30 13:48:51] ID_LIKE="rhel fedora"
[2026-01-30 13:48:51] VERSION_ID="7"
[2026-01-30 13:48:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 13:48:51] ANSI_COLOR="0;31"
[2026-01-30 13:48:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 13:48:51] HOME_URL="https://www.centos.org/"
[2026-01-30 13:48:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 13:48:51] 
[2026-01-30 13:48:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 13:48:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 13:48:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 13:48:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 13:48:51] 
[2026-01-30 13:48:51] 2026-01-30 18:48:18,295 | INFO     | **************************************
[2026-01-30 13:48:51] 2026-01-30 18:48:18,351 | WARNING  | process 895595 can no longer be monitored (due to stat problems) - aborting
[2026-01-30 13:48:51] 2026-01-30 18:48:18,728 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-30 13:48:51] 2026-01-30 18:48:18,805 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-30 13:48:51] 2026-01-30 18:48:18,855 | INFO     | sufficient remaining disk space (166003212288 B)
[2026-01-30 13:48:51] 2026-01-30 18:48:18,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 13:48:51] 2026-01-30 18:48:18,855 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 13:48:51] 2026-01-30 18:48:18,855 | INFO     | update_server=False
[2026-01-30 13:48:51] 2026-01-30 18:48:18,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 13:48:51] 2026-01-30 18:48:18,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 13:48:51] 2026-01-30 18:48:18,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 13:48:51] 2026-01-30 18:48:19,431 | INFO     | all job control threads have been joined
[2026-01-30 13:48:51] 2026-01-30 18:48:19,463 | INFO     | all payload control threads have been joined
[2026-01-30 13:48:51] 2026-01-30 18:48:19,793 | INFO     | number of running child processes to parent process 895595: 1
[2026-01-30 13:48:51] 2026-01-30 18:48:19,793 | INFO     | maximum number of monitored processes: 6
[2026-01-30 13:48:51] 2026-01-30 18:48:19,793 | INFO     | aborting job monitoring since job object (job id=6985836336) has expired
[2026-01-30 13:48:51] 2026-01-30 18:48:19,793 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 13:48:51] 2026-01-30 18:48:19,793 | INFO     | will abort loop
[2026-01-30 13:48:51] 2026-01-30 18:48:19,862 | INFO     | [job] retrieve thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:19,869 | INFO     | [job] queue monitor thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,002 | INFO     | all data control threads have been joined
[2026-01-30 13:48:51] 2026-01-30 18:48:20,032 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,066 | INFO     | [payload] failed_post thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,119 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,119 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,227 | INFO     | [job] validate thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,437 | INFO     | [job] control thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,469 | INFO     | [payload] control thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,535 | INFO     | [data] copytool_in thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,798 | INFO     | [job] job monitor thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,868 | INFO     | [data] copytool_out thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:20,944 | INFO     | [payload] validate_post thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:21,011 | INFO     | [data] control thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:21,035 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:21,726 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 13:48:51] 2026-01-30 18:48:25,735 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 13:48:51] 2026-01-30 18:48:41,364 | INFO     | [monitor] cgroup control has ended
[2026-01-30 13:48:51] 2026-01-30 18:48:42,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682729084736)>', '<ExcThread(monitor, started 139682226611968)>']
[2026-01-30 13:48:51] 2026-01-30 18:48:47,267 | INFO     | all workflow threads have been joined
[2026-01-30 13:48:51] 2026-01-30 18:48:47,267 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 13:48:51] 2026-01-30 18:48:47,267 | INFO     | traces error code: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:47,267 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 13:48:51] 2026-01-30 18:48:48,732 | INFO     | PID=885476 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | INFO     | .. there are 78 such processes running
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 13:48:51] 2026-01-30 18:48:48,740 | INFO     | [monitor] control thread has ended
[2026-01-30 13:48:51] 2026-01-30 18:48:49,721 [wrapper] ==== pilot stdout END ====
[2026-01-30 13:48:51] 2026-01-30 18:48:49,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 13:48:51] 2026-01-30 18:48:49,817 [wrapper] pilotpid: 885476
[2026-01-30 13:48:51] 2026-01-30 18:48:49,887 [wrapper] Pilot exit status: 0
[2026-01-30 13:48:51] 2026-01-30 18:48:50,148 [wrapper] pandaids: 6985836336
[2026-01-30 13:48:51] 2026-01-30 18:48:50,366 [wrapper] cleanup supervisor_pilot 1894688 885477
[2026-01-30 13:48:51] 2026-01-30 18:48:50,435 [wrapper] Test setup, not cleaning
[2026-01-30 13:48:51] 2026-01-30 18:48:50,465 [wrapper] apfmon messages muted
[2026-01-30 13:48:51] 2026-01-30 18:48:50,538 [wrapper] ==== wrapper stdout END ====
[2026-01-30 13:48:51] 2026-01-30 18:48:50,570 [wrapper] ==== wrapper stderr END ====
[2026-01-30 13:48:51]  *** Error codes and diagnostics ***
[2026-01-30 13:48:51]     "exeErrorCode": 0,
[2026-01-30 13:48:51]     "exeErrorDiag": "",
[2026-01-30 13:48:51]     "pilotErrorCode": 0,
[2026-01-30 13:48:51]     "pilotErrorDiag": "",
[2026-01-30 13:48:51]  *** Listing of results directory ***
[2026-01-30 13:48:51] total 663900
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 07:16 pilot3.tar.gz
[2026-01-30 13:48:51] -rwx------. 1 boincer umatlas     36322 Jan 30 08:00 runpilot2-wrapper.sh
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 08:00 queuedata.json
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas       100 Jan 30 12:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 13:48:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 30 12:29 run_atlas
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas       105 Jan 30 12:29 job.xml
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas 492681379 Jan 30 12:29 EVNT.48318008._000121.pool.root.1
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas     15845 Jan 30 12:29 start_atlas.sh
[2026-01-30 13:48:51] drwxrwx--x. 2 boincer umatlas      4096 Jan 30 12:29 shared
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas    597765 Jan 30 12:29 input.tar.gz
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas         0 Jan 30 12:29 boinc_lockfile
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas      2524 Jan 30 12:29 pandaJob.out
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas        57 Jan 30 12:29 setup.sh.local
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas   1009774 Jan 30 12:30 agis_schedconf.cvmfs.json
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas   1511668 Jan 30 12:30 agis_ddmendpoints.agis.ALL.json
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas       430 Jan 30 12:30 workernode_map.json
[2026-01-30 13:48:51] drwx------. 5 boincer umatlas      4096 Jan 30 12:30 pilot3
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas      7171 Jan 30 13:45 init_data.xml
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas 181223050 Jan 30 13:47 HITS.48318010._006369.pool.root.1
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas       530 Jan 30 13:47 boinc_task_state.xml
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas      1047 Jan 30 13:48 memory_monitor_summary.json
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas        95 Jan 30 13:48 pilot_heartbeat.json
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas    383120 Jan 30 13:48 log.48318010._006369.job.log.tgz.1
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas      6357 Jan 30 13:48 heartbeat.json
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas       822 Jan 30 13:48 pilotlog.txt
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas    608443 Jan 30 13:48 log.48318010._006369.job.log.1
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 30 13:48 boinc_mmap_file
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas       357 Jan 30 13:48 output.list
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas       620 Jan 30 13:48 runtime_log
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas   1013760 Jan 30 13:48 result.tar.gz
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas       653 Jan 30 13:48 wGTMDmuH358n9Rq4apOajLDm4fhM0noT9bVooX4SDmT3KKDmQ8jGHn.diag
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas      9333 Jan 30 13:48 runtime_log.err
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas        27 Jan 30 13:48 wrapper_checkpoint.txt
[2026-01-30 13:48:51] -rw-r--r--. 1 boincer umatlas     21216 Jan 30 13:48 stderr.txt
[2026-01-30 13:48:51] HITS file was successfully produced:
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas 181223050 Jan 30 13:47 shared/HITS.pool.root.1
[2026-01-30 13:48:51]  *** Contents of shared directory: ***
[2026-01-30 13:48:51] total 659712
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas 492681379 Jan 30 12:29 ATLAS.root_0
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas     15845 Jan 30 12:29 start_atlas.sh
[2026-01-30 13:48:51] -rw-r--r--. 2 boincer umatlas    597765 Jan 30 12:29 input.tar.gz
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas 181223050 Jan 30 13:47 HITS.pool.root.1
[2026-01-30 13:48:51] -rw-------. 1 boincer umatlas   1013760 Jan 30 13:48 result.tar.gz
13:48:53 (877707): run_atlas exited; CPU time 22622.501458
13:48:53 (877707): called boinc_finish(0)

</stderr_txt>
]]>

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