| Name | UYVMDmp1v58n9Rq4apOajLDm4fhM0noT9bVooX4SDmXNKKDm2YsRPo_1 |
| Workunit | 238792128 |
| Created | 30 Jan 2026, 9:41:36 UTC |
| Sent | 30 Jan 2026, 10:00:15 UTC |
| Report deadline | 7 Feb 2026, 10:00:15 UTC |
| Received | 31 Jan 2026, 21:06:13 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 0 (0x00000000) |
| Computer ID | 10698193 |
| Run time | 35 min 40 sec |
| CPU time | 2 hours 4 min 49 sec |
| Priority | 28 |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 39.76 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.99 GB |
| Peak swap size | 2.83 GB |
| Peak disk usage | 1.03 GB |
Stderr output
<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
22:29:11 (2282705): wrapper (7.7.26015): starting
22:29:11 (2282705): wrapper: running run_atlas (--nthreads 4)
[2026-01-31 22:29:11] Arguments: --nthreads 4
[2026-01-31 22:29:11] Threads: 4
[2026-01-31 22:29:11] Checking for CVMFS
[2026-01-31 22:29:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 22:29:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 22:29:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 22:29:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 22:29:12] 2.13.3.0 4067727 4180 47112 155726 2 50 22575780 33554433 0 130560 0 2648579 99.990 137549 185 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-31 22:29:12] CVMFS is ok
[2026-01-31 22:29:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 22:29:12] Checking for apptainer binary...
[2026-01-31 22:29:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 22:29:12] Running /usr/bin/apptainer --version
[2026-01-31 22:29:12] apptainer version 1.4.5
[2026-01-31 22:29:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 22:29:12] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-31 22:29:12] apptainer works
[2026-01-31 22:29:12] Set ATHENA_PROC_NUMBER=4
[2026-01-31 22:29:12] Set ATHENA_CORE_NUMBER=4
[2026-01-31 22:29:12] Starting ATLAS job with PandaID=6992964658
[2026-01-31 22:29:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 23:04:48] *** The last 200 lines of the pilot log: ***
[2026-01-31 23:04:48] 2026-01-31 21:03:01,522 | INFO | number of running child processes to parent process 2291168: 6
[2026-01-31 23:04:48] 2026-01-31 21:03:01,522 | INFO | maximum number of monitored processes: 6
[2026-01-31 23:04:48] 2026-01-31 21:03:01,950 | INFO | time since job start (2022s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:03,955 | INFO | time since job start (2024s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:04,024 | INFO | monitor loop #157: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:05,960 | INFO | time since job start (2026s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:07,965 | INFO | time since job start (2028s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:09,970 | INFO | time since job start (2030s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:11,975 | INFO | time since job start (2032s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:13,980 | INFO | time since job start (2034s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:14,074 | WARNING | Exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | WARNING | Traceback (most recent call last):
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/monitoring.py", line 193, in set_cpu_consumption_time
[2026-01-31 23:04:48] cpuconsumptiontime = get_current_cpu_consumption_time(job.pid)
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/processes.py", line 619, in get_current_cpu_consumption_time
[2026-01-31 23:04:48] ps_cache = get_ps_cache()
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/processes.py", line 191, in get_ps_cache
[2026-01-31 23:04:48] _ps_cache = list_processes_and_threads()
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/psutils.py", line 431, in list_processes_and_threads
[2026-01-31 23:04:48] for proc in psutil.process_iter(attrs=['pid', 'ppid', 'username']):
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 1499, in process_iter
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 1443, in pids
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1652, in pids
[2026-01-31 23:04:48] OSError: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | WARNING | will send preliminary diagnostics (and pretend job is still running)=Exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | INFO | log transfer has not been attempted: NOT_DONE
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | INFO | job 6992964658 has state 'running' - writing heartbeat
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | INFO | payload/TRF did not report the number of read events
[2026-01-31 23:04:48] 2026-01-31 21:03:14,075 | WARNING | exception caught: [Errno 116] Stale file handle: '/proc/cpuinfo'
[2026-01-31 23:04:48] 2026-01-31 21:03:15,986 | INFO | time since job start (2036s) is within the limit (349056.0s)
[2026-01-31 23:04:48] 2026-01-31 21:03:16,578 | INFO | monitor loop #158: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:16,578 | WARNING | exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2026-01-31 23:04:48] self._target(**self.kwargs)
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/control/monitor.py", line 246, in control
[2026-01-31 23:04:48] raise PilotException(error) from error
[2026-01-31 23:04:48] monitor: exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] unexpected exception caught by thread run() function: (<class 'pilot.common.exception.PilotException'>, PilotException(OSError(116, 'Stale file handle')), <traceback object at 0x7f9421c6a180>)
[2026-01-31 23:04:48] Traceback (most recent call last):
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/control/monitor.py", line 221, in control
[2026-01-31 23:04:48] processes = get_process_info('python3 pilot3/pilot.py', pid=getpid())
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/psutils.py", line 398, in get_process_info
[2026-01-31 23:04:48] for proc in psutil.process_iter(['pid', 'username', 'cpu_percent', 'memory_percent', 'cmdline']):
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 1499, in process_iter
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 1443, in pids
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1652, in pids
[2026-01-31 23:04:48] OSError: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] The above exception was the direct cause of the following exception:
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] Traceback (most recent call last):
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/common/exception.py", line 466, in run
[2026-01-31 23:04:48] self._target(**self.kwargs)
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/control/monitor.py", line 246, in control
[2026-01-31 23:04:48] raise PilotException(error) from error
[2026-01-31 23:04:48] pilot.common.exception.PilotException: error code: 1301, message: An unknown pilot exception has occurred
[2026-01-31 23:04:48] details: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] None
[2026-01-31 23:04:48] exception has been put in bucket queue belonging to thread 'monitor'
[2026-01-31 23:04:48] setting graceful stop in 10 s since there is no point in continuing
[2026-01-31 23:04:48] 2026-01-31 21:03:19,081 | INFO | monitor loop #159: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:19,081 | WARNING | exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] received exception from bucket queue in generic workflow: error code: 1301, message: An unknown pilot exception has occurred
[2026-01-31 23:04:48] details: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:21,582 | INFO | monitor loop #160: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:21,582 | WARNING | exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:24,085 | INFO | monitor loop #161: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:24,085 | WARNING | exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:26,588 | INFO | monitor loop #162: job 0:6992964658 is in state 'running'
[2026-01-31 23:04:48] 2026-01-31 21:03:26,588 | WARNING | exception caught: [Errno 116] Stale file handle: b'/proc'
[2026-01-31 23:04:48] 2026-01-31 21:03:27,040 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 23:04:48] 2026-01-31 21:03:27,040 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 23:04:48] 2026-01-31 21:03:27,040 | INFO | will abort loop
[2026-01-31 23:04:48] 2026-01-31 21:03:27,241 | INFO | breaking -- sending SIGTERM to pid=2291168
[2026-01-31 23:04:48] 2026-01-31 21:03:27,241 | INFO | breaking -- sleep 10 s before sending SIGKILL pid=2291168
[2026-01-31 23:04:48] 2026-01-31 21:03:27,331 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 23:04:48] 2026-01-31 21:03:27,331 | WARNING | since job:queue_monitor is responsible for sending job updates, we sleep for 20 s
[2026-01-31 23:04:48] 2026-01-31 21:03:27,659 | INFO | all payload control threads have been joined
[2026-01-31 23:04:48] 2026-01-31 21:03:28,046 | INFO | [job] job monitor thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,094 | INFO | all data control threads have been joined
[2026-01-31 23:04:48] 2026-01-31 21:03:28,226 | INFO | all job control threads have been joined
[2026-01-31 23:04:48] 2026-01-31 21:03:28,397 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 23:04:48] 2026-01-31 21:03:28,443 | INFO | [job] validate thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,444 | INFO | [job] retrieve thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,522 | INFO | [job] create_data_payload thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,572 | INFO | [payload] validate_post thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,642 | INFO | [payload] validate_pre thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,659 | INFO | [payload] failed_post thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,665 | INFO | [payload] control thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:28,778 | INFO | [data] copytool_in thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:29,043 | INFO | [data] copytool_out thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:29,099 | INFO | [data] control thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:29,231 | INFO | [job] control thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:31,221 | INFO | job.realtimelogging is not enabled
[2026-01-31 23:04:48] 2026-01-31 21:03:32,227 | INFO | [payload] run_realtimelog thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:32,403 | INFO | [data] queue_monitor thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:37,291 | INFO |
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] finished pid=2291168 exit_code=None state=failed
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] 2026-01-31 21:03:37,291 | WARNING | detected unset exit_code from wait_graceful - reset to -1
[2026-01-31 23:04:48] 2026-01-31 21:03:37,292 | INFO | using pid=2294987 to kill prmon
[2026-01-31 23:04:48] 2026-01-31 21:03:37,292 | INFO | stopping utility process 'MemoryMonitor' with signal 10
[2026-01-31 23:04:48] 2026-01-31 21:03:37,292 | WARNING | Error sending signal to/waiting for process 2294987: [Errno 3] No such process
[2026-01-31 23:04:48] 2026-01-31 21:03:37,292 | INFO | utility process 2291171 cleanup finished with status=None
[2026-01-31 23:04:48] 2026-01-31 21:03:37,292 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#0/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:40,301 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#1/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:43,316 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#2/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:46,331 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#3/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:49,343 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#4/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:50,372 | INFO | [job] queue monitor thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:03:52,345 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#5/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:55,352 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#6/#20)
[2026-01-31 23:04:48] 2026-01-31 21:03:58,367 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#7/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:01,381 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#8/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:04,396 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#9/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:07,408 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#10/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:10,423 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#11/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:13,438 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#12/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:16,454 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#13/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:19,469 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#14/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:21,769 | INFO | [monitor] cgroup control has ended
[2026-01-31 23:04:48] 2026-01-31 21:04:22,472 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#15/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:22,878 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:24,887 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:25,487 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#16/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:26,897 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:28,497 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#17/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:28,907 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:30,914 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:31,512 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#18/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:32,924 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:34,527 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#19/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:34,934 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:36,944 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:37,540 | INFO | taking a short nap (3 s) to allow the memory monitor to finish writing to the summary file (#20/#20)
[2026-01-31 23:04:48] 2026-01-31 21:04:38,955 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:40,554 | WARNING | file copy failure: path does not exist: /home/ek/BOINC/slots/0/PanDA_Pilot-6992964658/memory_monitor_summary.json
[2026-01-31 23:04:48] 2026-01-31 21:04:40,554 | WARNING | failed to copy memory monitor output: error code: 1103, message: No such file or directory
[2026-01-31 23:04:48] details: ('file copy failure: path does not exist: /home/ek/BOINC/slots/0/PanDA_Pilot-6992964658/memory_monitor_summary.json',)
[2026-01-31 23:04:48] 2026-01-31 21:04:40,555 | CRITICAL | execute payloads caught an exception (cannot recover): module 'psutil' has no attribute 'FileNotFoundError', Traceback (most recent call last):
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/psutils.py", line 340, in find_lingering_processes
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 319, in __init__
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 355, in _init
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/__init__.py", line 757, in create_time
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1717, in wrapper
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1948, in create_time
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1717, in wrapper
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_common.py", line 508, in wrapper
[2026-01-31 23:04:48] File "<string>", line 3, in raise_from
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_common.py", line 506, in wrapper
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_pslinux.py", line 1780, in _parse_stat_file
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_common.py", line 851, in bcat
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_common.py", line 839, in cat
[2026-01-31 23:04:48] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/6.0.0-x86_64-centos7/lib/python3.9/site-packages/psutil/_common.py", line 799, in open_binary
[2026-01-31 23:04:48] OSError: [Errno 116] Stale file handle: '/proc/2286528/stat'
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] During handling of the above exception, another exception occurred:
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] Traceback (most recent call last):
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/control/payload.py", line 272, in execute_payloads
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/control/payloads/generic.py", line 1029, in run
[2026-01-31 23:04:48] File "/home/ek/BOINC/slots/0/pilot3/pilot/util/psutils.py", line 347, in find_lingering_processes
[2026-01-31 23:04:48] AttributeError: module 'psutil' has no attribute 'FileNotFoundError'
[2026-01-31 23:04:48]
[2026-01-31 23:04:48] 2026-01-31 21:04:40,965 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:41,585 | INFO | waiting for thread to finish: ['<_MainThread(MainThread, started 140274282374976)>', '<ExcThread(execute_payloads, started 140273925465856)>']
[2026-01-31 23:04:48] 2026-01-31 21:04:41,585 | INFO | [payload] execute_payloads thread has finished
[2026-01-31 23:04:48] 2026-01-31 21:04:42,972 | INFO | caller=run is remaining thread - safe to abort (names=['<_MainThread(MainThread, started 140274282374976)>'])
[2026-01-31 23:04:48] 2026-01-31 21:04:47,996 | INFO | all workflow threads have been joined
[2026-01-31 23:04:48] 2026-01-31 21:04:47,997 | INFO | end of generic workflow (traces error code: 0)
[2026-01-31 23:04:48] 2026-01-31 21:04:47,997 | INFO | traces error code: 0
[2026-01-31 23:04:48] 2026-01-31 21:04:47,997 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] ==== pilot stdout END ====
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] ==== wrapper stdout RESUME ====
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] pilotpid: 2286528
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] Pilot exit status: 0
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] File not found: /home/ek/BOINC/slots/0/pilot3/pandaIDs.out, no payload
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 10: date: command not found
[2026-01-31 23:04:48] File not found: /home/ek/BOINC/slots/0/pilot3/pandaIDs.out, no payload
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 27: ps: command not found
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] No supervise_pilot CHILD process found
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 36: /dev/null: Stale file handle
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] Test setup, not cleaning
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] apfmon messages muted
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 15: date: command not found
[2026-01-31 23:04:48] ==== wrapper stdout END ====
[2026-01-31 23:04:48] ./runpilot2-wrapper.sh: line 10: date: command not found
[2026-01-31 23:04:48] ==== wrapper stderr END ====
[2026-01-31 23:04:48] *** Error codes and diagnostics ***
[2026-01-31 23:04:48] *** Listing of results directory ***
[2026-01-31 23:04:48] total 492536
[2026-01-31 23:04:48] -rw-r--r-- 1 ek ek 584422 Jan 30 07:11 pilot3.tar.gz
[2026-01-31 23:04:48] -rwx------ 1 ek ek 36322 Jan 30 07:15 runpilot2-wrapper.sh
[2026-01-31 23:04:48] -rw-r--r-- 1 ek ek 5111 Jan 30 07:18 queuedata.json
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 100 Jan 31 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 23:04:48] -rwxr-xr-x 1 ek ek 7986 Jan 31 22:29 run_atlas
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 105 Jan 31 22:29 job.xml
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 499808420 Jan 31 22:29 EVNT.48317949._000082.pool.root.1
[2026-01-31 23:04:48] drwxrwx--x 2 ek ek 4096 Jan 31 22:29 shared
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 597760 Jan 31 22:29 input.tar.gz
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 15845 Jan 31 22:29 start_atlas.sh
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 0 Jan 31 22:29 boinc_setup_complete
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 9841 Jan 31 22:29 init_data.xml
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 0 Jan 31 22:29 boinc_lockfile
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 2522 Jan 31 22:29 pandaJob.out
[2026-01-31 23:04:48] -rw------- 1 ek ek 50 Jan 31 22:29 setup.sh.local
[2026-01-31 23:04:48] -rw------- 1 ek ek 1010528 Jan 31 22:29 agis_schedconf.cvmfs.json
[2026-01-31 23:04:48] -rw------- 1 ek ek 1511668 Jan 31 22:29 agis_ddmendpoints.agis.ALL.json
[2026-01-31 23:04:48] -rw------- 1 ek ek 433 Jan 31 22:29 workernode_map.json
[2026-01-31 23:04:48] drwx------ 5 ek ek 4096 Jan 31 22:29 pilot3
[2026-01-31 23:04:48] -rw------- 1 ek ek 915 Jan 31 22:59 heartbeat.json
[2026-01-31 23:04:48] -rw------- 1 ek ek 95 Jan 31 23:02 pilot_heartbeat.json
[2026-01-31 23:04:48] drwxrwx--- 2 ek ek 4096 Jan 31 23:02 PanDA_Pilot-6992964658
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 529 Jan 31 23:03 boinc_task_state.xml
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 8192 Jan 31 23:04 boinc_mmap_file
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 26 Jan 31 23:04 wrapper_checkpoint.txt
[2026-01-31 23:04:48] -rw------- 1 ek ek 307178 Jan 31 23:04 pilotlog.txt
[2026-01-31 23:04:48] -rw------- 1 ek ek 541 Jan 31 23:04 UYVMDmp1v58n9Rq4apOajLDm4fhM0noT9bVooX4SDmXNKKDm2YsRPo.diag
[2026-01-31 23:04:48] -rw------- 1 ek ek 324837 Jan 31 23:04 log.48317952._004452.job.log.1
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 428 Jan 31 23:04 runtime_log
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 10142 Jan 31 23:04 runtime_log.err
[2026-01-31 23:04:48] -rw-rw-r-- 1 ek ek 25265 Jan 31 23:04 stderr.txt
[2026-01-31 23:04:48] No HITS result produced
[2026-01-31 23:04:48] *** Contents of shared directory: ***
[2026-01-31 23:04:48] total 488700
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 499808420 Jan 31 22:29 ATLAS.root_0
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 597760 Jan 31 22:29 input.tar.gz
[2026-01-31 23:04:48] -rw-r--r-- 2 ek ek 15845 Jan 31 22:29 start_atlas.sh
23:04:49 (2282705): run_atlas exited; CPU time 28.577235
23:04:49 (2282705): called boinc_finish(0)
</stderr_txt>
<message>
upload failure: <file_xfer_error>
<file_name>UYVMDmp1v58n9Rq4apOajLDm4fhM0noT9bVooX4SDmXNKKDm2YsRPo_1_r1373232459_ATLAS_result</file_name>
<error_code>-161 (not found)</error_code>
</file_xfer_error>
</message>
]]>
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