Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:27:56 (644649): wrapper (7.7.26015): starting
00:27:56 (644649): wrapper: running run_atlas (--nthreads 3)
[2026-01-31 00:27:56] Arguments: --nthreads 3
[2026-01-31 00:27:56] Threads: 3
[2026-01-31 00:27:56] Checking for CVMFS
[2026-01-31 00:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 00:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 00:27:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 00:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 00:27:57] 2.9.2.0 167419 3384 66512 155695 2 49 22400021 36864000 0 130560 0 1327976 99.986 101345 13308 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-31 00:27:57] CVMFS is ok
[2026-01-31 00:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-31 00:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-31 00:27:57] Further information can be found at the LHC@home message board.
[2026-01-31 00:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 00:27:57] Checking for apptainer binary...
[2026-01-31 00:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-31 00:27:57] Running /usr/bin/apptainer --version
[2026-01-31 00:27:57] apptainer version 1.4.2-2.1
[2026-01-31 00:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 00:27:57] cosA133a
[2026-01-31 00:27:57] apptainer works
[2026-01-31 00:28:18] Set ATHENA_PROC_NUMBER=3
[2026-01-31 00:28:18] Set ATHENA_CORE_NUMBER=3
[2026-01-31 00:28:18] Starting ATLAS job with PandaID=6985349319
[2026-01-31 00:28:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 02:00:48]  *** The last 200 lines of the pilot log: ***
[2026-01-31 02:00:48]  storage_token=
[2026-01-31 02:00:48]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6985349319/log.48318010._003909.job.log.tgz.1
[2026-01-31 02:00:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/13/log.48318010._003909.job.log.tgz.1
[2026-01-31 02:00:48]  workdir=None
[2026-01-31 02:00:48] ]
[2026-01-31 02:00:48] 2026-01-31 01:00:23,856 | INFO     | transferring file log.48318010._003909.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6985349319/log.48318010._003909.job.log.tgz.1 to /local/data/boinc/
[2026-01-31 02:00:48] 2026-01-31 01:00:23,856 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6985349319/log.48318010._003909.job.log.tgz.1 /local/data/boinc/slots/0/log.48318010._0039
[2026-01-31 02:00:48] 2026-01-31 01:00:23,868 | INFO     | adding to output.list: log.48318010._003909.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/13/log.48318010._003909.job.log.tg
[2026-01-31 02:00:48] 2026-01-31 01:00:23,868 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-31 02:00:48] 2026-01-31 01:00:23,869 | INFO     | summary of transferred files:
[2026-01-31 02:00:48] 2026-01-31 01:00:23,869 | INFO     |  -- lfn=log.48318010._003909.job.log.tgz.1, status_code=0, status=transferred
[2026-01-31 02:00:48] 2026-01-31 01:00:23,869 | INFO     | stage-out finished correctly
[2026-01-31 02:00:48] 2026-01-31 01:00:23,922 | INFO     | time since job start (5507s) is within the limit (349056.0s)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,084 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-31 02:00:48] 2026-01-31 01:00:25,673 | INFO     | job 6985349319 has state=finished
[2026-01-31 02:00:48] 2026-01-31 01:00:25,674 | INFO     | preparing for final server update for job 6985349319 in state='finished'
[2026-01-31 02:00:48] 2026-01-31 01:00:25,674 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6985349319/jobReport.json
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | this job has now completed (state=finished)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | log transfer has been attempted: DONE
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | job 6985349319 has finished - writing final server update
[2026-01-31 02:00:48] 2026-01-31 01:00:25,679 | INFO     | total number of processed events: 400 (read)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6985349319/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | INFO     | extracted standard info from prmon json
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 02:00:48] 2026-01-31 01:00:25,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | fitting pss+swap vs Time
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | sum of square deviations: 177275882.0
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | sum of deviations: -14551483632.0
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | mean x: 1769818541.0
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | mean y: 2470616.698795181
[2026-01-31 02:00:48] 2026-01-31 01:00:25,681 | INFO     | intersect: 145275957570.61856
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | chi2: 0.0559122593937959
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | current memory leak: -82.08 B/s (using 83 data points, chi2=0.06)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | could have reported an average CPU frequency of 4365 MHz (7 samples)
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | ..............................
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . Timing measurements:
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . get job = 0 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . initial setup = 6 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . payload setup = 5 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . stage-in = 0 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . payload execution = 5487 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . stage-out = 0 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | . log creation = 0 s
[2026-01-31 02:00:48] 2026-01-31 01:00:25,682 | INFO     | ..............................
[2026-01-31 02:00:48] 2026-01-31 01:00:25,928 | INFO     | time since job start (5509s) is within the limit (349056.0s)
[2026-01-31 02:00:48] 2026-01-31 01:00:26,147 | INFO     | 
[2026-01-31 02:00:48] 2026-01-31 01:00:26,148 | INFO     | job summary report
[2026-01-31 02:00:48] 2026-01-31 01:00:26,148 | INFO     | --------------------------------------------------
[2026-01-31 02:00:48] 2026-01-31 01:00:26,148 | INFO     | PanDA job id: 6985349319
[2026-01-31 02:00:48] 2026-01-31 01:00:26,148 | INFO     | task id: 48318010
[2026-01-31 02:00:48] 2026-01-31 01:00:26,148 | INFO     | errors: (none)
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | pilot state: finished 
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | transexitcode: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | exeerrorcode: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | exeerrordiag: 
[2026-01-31 02:00:48] 2026-01-31 01:00:26,149 | INFO     | exitcode: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | exitmsg: OK
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | cpuconsumptiontime: 15813 s
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | nevents: 400
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | neventsw: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | pid: 653136
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | pgrp: 653136
[2026-01-31 02:00:48] 2026-01-31 01:00:26,150 | INFO     | corecount: 3
[2026-01-31 02:00:48] 2026-01-31 01:00:26,151 | INFO     | event service: False
[2026-01-31 02:00:48] 2026-01-31 01:00:26,151 | INFO     | sizes: {0: 2278277, 11: 2278277, 5496: 2313949, 5498: 2314143}
[2026-01-31 02:00:48] 2026-01-31 01:00:26,151 | INFO     | --------------------------------------------------
[2026-01-31 02:00:48] 2026-01-31 01:00:26,151 | INFO     | 
[2026-01-31 02:00:48] 2026-01-31 01:00:26,151 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-31 02:00:48] 2026-01-31 01:00:26,164 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | job 6985349319 has completed (purged errors)
[2026-01-31 02:00:48] 2026-01-31 01:00:26,165 | INFO     | overall cleanup function is called
[2026-01-31 02:00:48] 2026-01-31 01:00:27,169 | INFO     | --- collectZombieJob: --- 10, [653136]
[2026-01-31 02:00:48] 2026-01-31 01:00:27,170 | INFO     | zombie collector waiting for pid 653136
[2026-01-31 02:00:48] 2026-01-31 01:00:27,171 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 02:00:48] 2026-01-31 01:00:27,171 | INFO     | collected zombie processes
[2026-01-31 02:00:48] 2026-01-31 01:00:27,171 | INFO     | will attempt to kill all subprocesses of pid=653136
[2026-01-31 02:00:48] 2026-01-31 01:00:27,207 | INFO     | process IDs to be killed: [653136] (in reverse order)
[2026-01-31 02:00:48] 2026-01-31 01:00:27,233 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 02:00:48] 2026-01-31 01:00:27,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 02:00:48] 2026-01-31 01:00:27,234 | INFO     | did not find any defunct processes belonging to 653136
[2026-01-31 02:00:48] 2026-01-31 01:00:27,235 | INFO     | did not find any defunct processes belonging to 653136
[2026-01-31 02:00:48] 2026-01-31 01:00:27,235 | INFO     | ready for new job
[2026-01-31 02:00:48] 2026-01-31 01:00:27,235 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 02:00:48] 2026-01-31 01:00:27,235 | INFO     | **************************************
[2026-01-31 02:00:48] 2026-01-31 01:00:27,235 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 02:00:48] 2026-01-31 01:00:27,236 | INFO     | **************************************
[2026-01-31 02:00:48] 2026-01-31 01:00:27,236 | INFO     | 
[2026-01-31 02:00:48] 2026-01-31 01:00:27,236 | INFO     | architecture information:
[2026-01-31 02:00:48] 2026-01-31 01:00:27,236 | INFO     | executing command: cat /etc/os-release
[2026-01-31 02:00:48] 2026-01-31 01:00:27,246 | INFO     | cat /etc/os-release:
[2026-01-31 02:00:48] NAME="CentOS Linux"
[2026-01-31 02:00:48] VERSION="7 (Core)"
[2026-01-31 02:00:48] ID="centos"
[2026-01-31 02:00:48] ID_LIKE="rhel fedora"
[2026-01-31 02:00:48] VERSION_ID="7"
[2026-01-31 02:00:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 02:00:48] ANSI_COLOR="0;31"
[2026-01-31 02:00:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 02:00:48] HOME_URL="https://www.centos.org/"
[2026-01-31 02:00:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 02:00:48] 
[2026-01-31 02:00:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 02:00:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 02:00:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 02:00:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 02:00:48] 
[2026-01-31 02:00:48] 2026-01-31 01:00:27,246 | INFO     | **************************************
[2026-01-31 02:00:48] 2026-01-31 01:00:27,749 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | INFO     | sufficient remaining disk space (335584165888 B)
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | INFO     | update_server=False
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 02:00:48] 2026-01-31 01:00:27,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 02:00:48] 2026-01-31 01:00:28,276 | INFO     | all job control threads have been joined
[2026-01-31 02:00:48] 2026-01-31 01:00:28,619 | INFO     | all data control threads have been joined
[2026-01-31 02:00:48] 2026-01-31 01:00:28,768 | INFO     | [job] retrieve thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:28,789 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:28,835 | WARNING  | process 653136 can no longer be monitored (due to stat problems) - aborting
[2026-01-31 02:00:48] 2026-01-31 01:00:28,861 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 02:00:48] 2026-01-31 01:00:28,862 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 02:00:48] 2026-01-31 01:00:28,862 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-31 02:00:48] 2026-01-31 01:00:28,862 | WARNING  | maxPSS not found in memory monitor output
[2026-01-31 02:00:48] 2026-01-31 01:00:28,862 | INFO     | reaping zombies for max 20 seconds
[2026-01-31 02:00:48] 2026-01-31 01:00:28,867 | INFO     | checking for looping job (in state=finished)
[2026-01-31 02:00:48] 2026-01-31 01:00:28,867 | INFO     | using looping job limit: 7200 s
[2026-01-31 02:00:48] 2026-01-31 01:00:28,867 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6985349319/payload.stdout) since it has not been created yet
[2026-01-31 02:00:48] 2026-01-31 01:00:28,867 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-31 02:00:48] 2026-01-31 01:00:28,877 | INFO     | sufficient remaining disk space (335584165888 B)
[2026-01-31 02:00:48] 2026-01-31 01:00:28,877 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-31 02:00:48] 2026-01-31 01:00:28,877 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6985349319/HITS.48318010._003909.pool.root.1 since it does not exist
[2026-01-31 02:00:48] 2026-01-31 01:00:28,912 | INFO     | number of running child processes to parent process 653136: 1
[2026-01-31 02:00:48] 2026-01-31 01:00:28,912 | INFO     | maximum number of monitored processes: 6
[2026-01-31 02:00:48] 2026-01-31 01:00:28,912 | INFO     | aborting job monitoring since job object (job id=6985349319) has expired
[2026-01-31 02:00:48] 2026-01-31 01:00:28,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 02:00:48] 2026-01-31 01:00:28,912 | INFO     | will abort loop
[2026-01-31 02:00:48] 2026-01-31 01:00:29,074 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,222 | INFO     | all payload control threads have been joined
[2026-01-31 02:00:48] 2026-01-31 01:00:29,282 | INFO     | [job] control thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,418 | INFO     | [payload] validate_post thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,625 | INFO     | [data] control thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,767 | INFO     | [payload] failed_post thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,768 | INFO     | [data] copytool_out thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:29,918 | INFO     | [job] job monitor thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:30,084 | INFO     | [job] validate thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:30,089 | INFO     | [data] copytool_in thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:30,184 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:30,228 | INFO     | [payload] control thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:30,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 02:00:48] 2026-01-31 01:00:31,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 02:00:48] 2026-01-31 01:00:31,728 | INFO     | [job] queue monitor thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:35,131 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:38,649 | INFO     | job.realtimelogging is not enabled
[2026-01-31 02:00:48] 2026-01-31 01:00:39,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 02:00:48] 2026-01-31 01:00:42,728 | INFO     | [monitor] cgroup control has ended
[2026-01-31 02:00:48] 2026-01-31 01:00:43,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310480693056)>', '<ExcThread(monitor, started 140309962925824)>']
[2026-01-31 02:00:48] 2026-01-31 01:00:43,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 02:00:48] 2026-01-31 01:00:43,846 | INFO     | [monitor] control thread has ended
[2026-01-31 02:00:48] 2026-01-31 01:00:48,223 | INFO     | all workflow threads have been joined
[2026-01-31 02:00:48] 2026-01-31 01:00:48,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 02:00:48] 2026-01-31 01:00:48,224 | INFO     | traces error code: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:48,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 02:00:48] 2026-01-31 01:00:48,268 [wrapper] ==== pilot stdout END ====
[2026-01-31 02:00:48] 2026-01-31 01:00:48,271 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 02:00:48] 2026-01-31 01:00:48,274 [wrapper] pilotpid: 648699
[2026-01-31 02:00:48] 2026-01-31 01:00:48,277 [wrapper] Pilot exit status: 0
[2026-01-31 02:00:48] 2026-01-31 01:00:48,284 [wrapper] pandaids: 6985349319
[2026-01-31 02:00:48] 2026-01-31 01:00:48,300 [wrapper] cleanup supervisor_pilot  658770 648700
[2026-01-31 02:00:48] 2026-01-31 01:00:48,303 [wrapper] Test setup, not cleaning
[2026-01-31 02:00:48] 2026-01-31 01:00:48,306 [wrapper] apfmon messages muted
[2026-01-31 02:00:48] 2026-01-31 01:00:48,309 [wrapper] ==== wrapper stdout END ====
[2026-01-31 02:00:48] 2026-01-31 01:00:48,312 [wrapper] ==== wrapper stderr END ====
[2026-01-31 02:00:48]  *** Error codes and diagnostics ***
[2026-01-31 02:00:48]     "exeErrorCode": 0,
[2026-01-31 02:00:48]     "exeErrorDiag": "",
[2026-01-31 02:00:48]     "pilotErrorCode": 0,
[2026-01-31 02:00:48]     "pilotErrorDiag": "",
[2026-01-31 02:00:48]  *** Listing of results directory ***
[2026-01-31 02:00:48] total 669024
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc    584422 Jan 30 10:05 pilot3.tar.gz
[2026-01-31 02:00:48] -rwx------ 1 boinc boinc     36322 Jan 30 10:09 runpilot2-wrapper.sh
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc      5111 Jan 30 10:10 queuedata.json
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc       100 Jan 31 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 02:00:48] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 00:27 run_atlas
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc       105 Jan 31 00:27 job.xml
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc 496429678 Jan 31 00:27 EVNT.48318008._000072.pool.root.1
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc    597766 Jan 31 00:27 input.tar.gz
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc     15845 Jan 31 00:27 start_atlas.sh
[2026-01-31 02:00:48] drwxrwx--x 2 boinc boinc      4096 Jan 31 00:27 shared
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc         0 Jan 31 00:27 boinc_setup_complete
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc      6274 Jan 31 00:27 init_data.xml
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc         0 Jan 31 00:27 boinc_lockfile
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc      2524 Jan 31 00:27 pandaJob.out
[2026-01-31 02:00:48] -rw------- 1 boinc boinc   1010536 Jan 31 00:28 agis_schedconf.cvmfs.json
[2026-01-31 02:00:48] -rw------- 1 boinc boinc   1511668 Jan 31 00:28 agis_ddmendpoints.agis.ALL.json
[2026-01-31 02:00:48] -rw------- 1 boinc boinc       428 Jan 31 00:28 workernode_map.json
[2026-01-31 02:00:48] drwx------ 5 boinc boinc      4096 Jan 31 00:28 pilot3
[2026-01-31 02:00:48] -rw------- 1 boinc boinc        95 Jan 31 01:59 pilot_heartbeat.json
[2026-01-31 02:00:48] -rw------- 1 boinc boinc 182542046 Jan 31 02:00 HITS.48318010._003909.pool.root.1
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc       530 Jan 31 02:00 boinc_task_state.xml
[2026-01-31 02:00:48] -rw------- 1 boinc boinc      1015 Jan 31 02:00 memory_monitor_summary.json
[2026-01-31 02:00:48] -rw------- 1 boinc boinc    283089 Jan 31 02:00 log.48318010._003909.job.log.tgz.1
[2026-01-31 02:00:48] -rw------- 1 boinc boinc      6326 Jan 31 02:00 heartbeat.json
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc      8192 Jan 31 02:00 boinc_mmap_file
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc        27 Jan 31 02:00 wrapper_checkpoint.txt
[2026-01-31 02:00:48] -rw------- 1 boinc boinc      6346 Jan 31 02:00 pilotlog.txt
[2026-01-31 02:00:48] -rw------- 1 boinc boinc    802123 Jan 31 02:00 log.48318010._003909.job.log.1
[2026-01-31 02:00:48] -rw------- 1 boinc boinc       357 Jan 31 02:00 output.list
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc       620 Jan 31 02:00 runtime_log
[2026-01-31 02:00:48] -rw------- 1 boinc boinc   1105920 Jan 31 02:00 result.tar.gz
[2026-01-31 02:00:48] -rw------- 1 boinc boinc       659 Jan 31 02:00 uKxMDmtgz58n9Rq4apOajLDm4fhM0noT9bVooX4SDmOmKKDm8G0Mnm.diag
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc      8906 Jan 31 02:00 runtime_log.err
[2026-01-31 02:00:48] -rw-r--r-- 1 boinc boinc     22168 Jan 31 02:00 stderr.txt
[2026-01-31 02:00:48] HITS file was successfully produced:
[2026-01-31 02:00:48] -rw------- 1 boinc boinc 182542046 Jan 31 02:00 shared/HITS.pool.root.1
[2026-01-31 02:00:48]  *** Contents of shared directory: ***
[2026-01-31 02:00:48] total 664744
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc 496429678 Jan 31 00:27 ATLAS.root_0
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc    597766 Jan 31 00:27 input.tar.gz
[2026-01-31 02:00:48] -rw-r--r-- 2 boinc boinc     15845 Jan 31 00:27 start_atlas.sh
[2026-01-31 02:00:48] -rw------- 1 boinc boinc 182542046 Jan 31 02:00 HITS.pool.root.1
[2026-01-31 02:00:48] -rw------- 1 boinc boinc   1105920 Jan 31 02:00 result.tar.gz
02:00:50 (644649): run_atlas exited; CPU time 15843.432206
02:00:50 (644649): called boinc_finish(0)

</stderr_txt>
]]>

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