Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-30 02:56:56 (19284): vboxwrapper version 26210
2026-01-30 02:56:56 (19284): BOINC client version: 8.2.8
2026-01-30 02:57:03 (19284): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-01-30 02:57:03 (19284): Successfully copied 'init_data.xml' to the shared directory.
2026-01-30 02:57:03 (19284): Create VM. (boinc_ac1247381a0f2f37, slot#3)
2026-01-30 02:57:04 (19284): Setting Memory Size for VM. (4600MB)
2026-01-30 02:57:04 (19284): Setting CPU Count for VM. (6)
2026-01-30 02:57:05 (19284): Setting Chipset Options for VM.
2026-01-30 02:57:05 (19284): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-30 02:57:05 (19284): Setting Boot Options for VM.
2026-01-30 02:57:06 (19284): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-30 02:57:06 (19284): Enabling VM Network Access.
2026-01-30 02:57:06 (19284): Disabling USB Support for VM.
2026-01-30 02:57:07 (19284): Disabling COM Port Support for VM.
2026-01-30 02:57:07 (19284): Disabling LPT Port Support for VM.
2026-01-30 02:57:07 (19284): Disabling Audio Support for VM.
2026-01-30 02:57:07 (19284): Disabling Clipboard Support for VM.
2026-01-30 02:57:08 (19284): Disabling Drag and Drop Support for VM.
2026-01-30 02:57:08 (19284): Adding storage controller(s) to VM.
2026-01-30 02:57:08 (19284): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-30 02:57:11 (19284): Adding VirtualBox Guest Additions to VM.
2026-01-30 02:57:11 (19284): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-30 02:57:11 (19284): forwarding host port 53103 to guest port 80
2026-01-30 02:57:12 (19284): Enabling remote desktop for VM.
2026-01-30 02:57:12 (19284): Required extension pack not installed, remote desktop not enabled.
2026-01-30 02:57:12 (19284): Enabling shared directory for VM.
2026-01-30 02:57:13 (19284): Starting VM using VBoxManage interface. (boinc_ac1247381a0f2f37, slot#3)
2026-01-30 02:57:19 (19284): Successfully started VM. (PID = '11644')
2026-01-30 02:57:19 (19284): Reporting VM Process ID to BOINC.
2026-01-30 02:57:19 (19284): Guest Log: BIOS: VirtualBox 7.1.6
2026-01-30 02:57:19 (19284): Guest Log: CPUID EDX: 0x178bfbff
2026-01-30 02:57:19 (19284): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-30 02:57:19 (19284): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-30 02:57:19 (19284): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-30 02:57:19 (19284): Detected: Web Application Enabled (http://localhost:53103)
2026-01-30 02:57:19 (19284): Preference change detected
2026-01-30 02:57:19 (19284): Setting CPU throttle for VM. (50%)
2026-01-30 02:57:20 (19284): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-30 02:57:21 (19284): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-30 02:57:21 (19284): Guest Log: BIOS: Booting from Hard Disk...
2026-01-30 02:57:24 (19284): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-30 02:57:24 (19284): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-30 02:57:24 (19284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-30 02:57:34 (19284): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-30 02:57:34 (19284): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-30 02:58:02 (19284): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000146 main     Log opened 2026-01-30T02:58:00.500187000Z
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000263 main     OS Product: Linux
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000306 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000340 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000373 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000374 main     Process ID: 1344
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.000375 main     Package type: LINUX_64BITS_GENERIC
2026-01-30 02:58:02 (19284): Guest Log: 00:00:00.001195 main     5.2.32 r132073 started. Verbose level = 0
2026-01-30 02:58:02 (19284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-30 02:58:02 (19284): Guest Log: [INFO] Mounting shared directory
2026-01-30 02:58:02 (19284): Guest Log: [INFO] Checking for init_data.xml
2026-01-30 02:58:12 (19284): Guest Log: 00:00:10.003931 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 423 559 000ns (GuestNow=1 769 759 891 926 748 000 ns GuestLast=1 769 741 880 503 189 000 ns fSetTimeLastLoop=true )
2026-01-30 02:58:13 (19284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-30 02:58:13 (19284): Guest Log: [INFO] Detected branch: prod
2026-01-30 02:58:13 (19284): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-30 02:58:13 (19284): Guest Log: Copying input files
2026-01-30 02:58:19 (19284): Guest Log: Copied input files into RunAtlas.
2026-01-30 02:58:19 (19284): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-30 02:58:19 (19284): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-30 02:58:19 (19284): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-30 02:58:19 (19284): Guest Log: Further information can be found at the LHC@home message board.
2026-01-30 02:58:30 (19284): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-30 02:58:30 (19284): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-30 02:58:30 (19284): Guest Log: 2.6.3.0 1648 0 32200 155670 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-30 02:58:33 (19284): Guest Log: copied the webapp to /var/www
2026-01-30 02:58:33 (19284): Guest Log: ATHENA_PROC_NUMBER=6
2026-01-30 02:58:33 (19284): Guest Log: ATHENA_CORE_NUMBER=6
2026-01-30 02:58:34 (19284): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-30 02:58:34 (19284): Guest Log:  *** Starting ATLAS job. (PandaID=6992845170 taskID=48317872) ***
2026-01-30 04:37:24 (19284): Status Report: Elapsed Time: '6000.000000'
2026-01-30 04:37:24 (19284): Status Report: CPU Time: '19386.875000'
2026-01-30 06:17:29 (19284): Status Report: Elapsed Time: '12000.000000'
2026-01-30 06:17:29 (19284): Status Report: CPU Time: '41107.187500'
2026-01-30 06:50:55 (19284): Guest Log:  *** Job finished ***
2026-01-30 06:50:55 (19284): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:21,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:25,321 | INFO     | [data] queue_monitor thread has finished
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:48,921 | INFO     | [monitor] cgroup control has ended
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:49,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605606246208)>', '<ExcThread(monitor, started 140604814128896)>']
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:49,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:49,882 | INFO     | [monitor] control thread has ended
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,255 | INFO     | all workflow threads have been joined
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,255 | INFO     | end of generic workflow (traces error code: 0)
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,256 | INFO     | traces error code: 0
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,392 [wrapper] ==== pilot stdout END ====
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,396 [wrapper] ==== wrapper stdout RESUME ====
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,400 [wrapper] pilotpid: 6059
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,405 [wrapper] Pilot exit status: 0
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,496 [wrapper] pandaids: 6992845170
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,523 [wrapper] cleanup supervisor_pilot 28298 6060
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,527 [wrapper] Test setup, not cleaning
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,531 [wrapper] apfmon messages muted
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,536 [wrapper] ==== wrapper stdout END ====
2026-01-30 06:50:55 (19284): Guest Log: 2026-01-30 11:50:54,540 [wrapper] ==== wrapper stderr END ====
2026-01-30 06:50:55 (19284): Guest Log:  *** Error codes and diagnostics ***
2026-01-30 06:50:55 (19284): Guest Log:     "exeErrorCode": 0,
2026-01-30 06:50:55 (19284): Guest Log:     "exeErrorDiag": "",
2026-01-30 06:50:55 (19284): Guest Log:     "pilotErrorCode": 0,
2026-01-30 06:50:55 (19284): Guest Log:     "pilotErrorDiag": "",
2026-01-30 06:50:55 (19284): Guest Log:  *** Listing of results directory ***
2026-01-30 06:50:55 (19284): Guest Log: total 194240
2026-01-30 06:50:55 (19284): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 30 03:22 queuedata.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 30 03:22 pilot3.tar.gz
2026-01-30 06:50:55 (19284): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 30 03:22 runpilot2-wrapper.sh
2026-01-30 06:50:55 (19284): Guest Log: -rwxr-xr-x. 1 atlas atlas      8775 Jan 30 07:58 init_data.xml
2026-01-30 06:50:55 (19284): Guest Log: -rwxr-xr-x. 1 atlas atlas    597756 Jan 30 07:58 input.tar.gz
2026-01-30 06:50:55 (19284): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 30 07:58 start_atlas.sh
2026-01-30 06:50:55 (19284): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 30 07:58 EVNT.48317869._000275.pool.root.1 -> /data/./ATLAS.root_0
2026-01-30 06:50:55 (19284): Guest Log: -rw-r--r--. 1 atlas atlas      2518 Jan 30 07:58 pandaJob.out
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas   1009718 Jan 30 07:59 agis_schedconf.cvmfs.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas       411 Jan 30 07:59 workernode_map.json
2026-01-30 06:50:55 (19284): Guest Log: drwx------. 5 atlas atlas      4096 Jan 30 07:59 pilot3
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas 190421086 Jan 30 11:49 HITS.48317872._014949.pool.root.1
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas        95 Jan 30 11:49 pilot_heartbeat.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas      1033 Jan 30 11:50 memory_monitor_summary.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas   1511668 Jan 30 11:50 agis_ddmendpoints.agis.ALL.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas    429568 Jan 30 11:50 log.48317872._014949.job.log.tgz.1
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas      6338 Jan 30 11:50 heartbeat.json
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas      4794 Jan 30 11:50 pilotlog.txt
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas   1872910 Jan 30 11:50 log.48317872._014949.job.log.1
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas       357 Jan 30 11:50 output.list
2026-01-30 06:50:55 (19284): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 30 11:50 runtime_log
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas   2324480 Jan 30 11:50 result.tar.gz
2026-01-30 06:50:55 (19284): Guest Log: -rw-r--r--. 1 atlas atlas      8739 Jan 30 11:50 runtime_log.err
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas       656 Jan 30 11:50 agBNDmWGu58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmEGKKDm2fOpdn.diag
2026-01-30 06:50:55 (19284): Guest Log: Looking for outputfile HITS.48317872._014949.pool.root.1
2026-01-30 06:50:55 (19284): Guest Log: HITS file was successfully produced
2026-01-30 06:50:55 (19284): Guest Log: -rw-------. 1 atlas atlas 190421086 Jan 30 11:49 /home/atlas/RunAtlas/HITS.48317872._014949.pool.root.1
2026-01-30 06:50:57 (19284): Guest Log: Successfully finished the ATLAS job!
2026-01-30 06:50:57 (19284): Guest Log: Copying the results back to the shared directory!
2026-01-30 06:50:57 (19284): Guest Log:  *** Contents of shared directory: ***
2026-01-30 06:50:57 (19284): Guest Log: total 676040
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root 498887439 Jan 30 07:56 ATLAS.root_0
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root 190421086 Jan 30 11:50 HITS.pool.root.1
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root      8775 Jan 30 07:56 init_data.xml
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root    597756 Jan 30 06:47 input.tar.gz
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root   2324480 Jan 30 11:50 result.tar.gz
2026-01-30 06:50:57 (19284): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 30 06:47 start_atlas.sh
2026-01-30 06:50:57 (19284): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-30 06:50:57 (19284): VM Completion File Detected.
2026-01-30 06:50:57 (19284): Powering off VM.
2026-01-30 06:50:58 (19284): Successfully stopped VM.
2026-01-30 06:50:58 (19284): Deregistering VM. (boinc_ac1247381a0f2f37, slot#3)
2026-01-30 06:50:58 (19284): Removing network bandwidth throttle group from VM.
2026-01-30 06:50:59 (19284): Removing VM from VirtualBox.
2026-01-30 06:51:04 (19284): called boinc_finish(0)

</stderr_txt>
]]>

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