Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:31:15 (1632137): wrapper (7.7.26015): starting
13:31:15 (1632137): wrapper: running run_atlas (--nthreads 4)
[2026-01-30 13:31:15] Arguments: --nthreads 4
[2026-01-30 13:31:15] Threads: 4
[2026-01-30 13:31:15] Checking for CVMFS
[2026-01-30 13:31:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-30 13:31:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-30 13:31:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-30 13:31:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-30 13:31:16] 2.9.2.0 1058158 2716 92464 155676 3 188 34863377 36864000 0 130560 0 1626489 99.990 72043 13048 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-30 13:31:16] CVMFS is ok
[2026-01-30 13:31:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-30 13:31:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-30 13:31:16] Further information can be found at the LHC@home message board.
[2026-01-30 13:31:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-30 13:31:16] Checking for apptainer binary...
[2026-01-30 13:31:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-30 13:31:16] Running /usr/bin/apptainer --version
[2026-01-30 13:31:16] apptainer version 1.4.1-1.1
[2026-01-30 13:31:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-30 13:31:16] thA315b
[2026-01-30 13:31:16] apptainer works
[2026-01-30 13:31:16] Set ATHENA_PROC_NUMBER=4
[2026-01-30 13:31:16] Set ATHENA_CORE_NUMBER=4
[2026-01-30 13:31:16] Starting ATLAS job with PandaID=6992221982
[2026-01-30 13:31:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 14:34:46]  *** The last 200 lines of the pilot log: ***
[2026-01-30 14:34:46] 2026-01-30 13:34:14,014 | INFO     | job 6992221982 has completed (purged errors)
[2026-01-30 14:34:46] 2026-01-30 13:34:14,014 | INFO     | overall cleanup function is called
[2026-01-30 14:34:46] 2026-01-30 13:34:15,021 | INFO     | --- collectZombieJob: --- 10, [1640751]
[2026-01-30 14:34:46] 2026-01-30 13:34:15,021 | INFO     | zombie collector waiting for pid 1640751
[2026-01-30 14:34:46] 2026-01-30 13:34:15,021 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 14:34:46] 2026-01-30 13:34:15,021 | INFO     | collected zombie processes
[2026-01-30 14:34:46] 2026-01-30 13:34:15,021 | INFO     | will attempt to kill all subprocesses of pid=1640751
[2026-01-30 14:34:46] 2026-01-30 13:34:15,066 | INFO     | process IDs to be killed: [1640751] (in reverse order)
[2026-01-30 14:34:46] 2026-01-30 13:34:15,093 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 14:34:46] 2026-01-30 13:34:15,093 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 14:34:46] 2026-01-30 13:34:15,095 | INFO     | did not find any defunct processes belonging to 1640751
[2026-01-30 14:34:46] 2026-01-30 13:34:15,096 | INFO     | did not find any defunct processes belonging to 1640751
[2026-01-30 14:34:46] 2026-01-30 13:34:15,096 | INFO     | ready for new job
[2026-01-30 14:34:46] 2026-01-30 13:34:15,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 14:34:46] 2026-01-30 13:34:15,097 | INFO     | **************************************
[2026-01-30 14:34:46] 2026-01-30 13:34:15,097 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 14:34:46] 2026-01-30 13:34:15,097 | INFO     | **************************************
[2026-01-30 14:34:46] 2026-01-30 13:34:15,097 | INFO     | 
[2026-01-30 14:34:46] 2026-01-30 13:34:15,098 | INFO     | architecture information:
[2026-01-30 14:34:46] 2026-01-30 13:34:15,098 | INFO     | executing command: cat /etc/os-release
[2026-01-30 14:34:46] 2026-01-30 13:34:15,108 | INFO     | cat /etc/os-release:
[2026-01-30 14:34:46] NAME="CentOS Linux"
[2026-01-30 14:34:46] VERSION="7 (Core)"
[2026-01-30 14:34:46] ID="centos"
[2026-01-30 14:34:46] ID_LIKE="rhel fedora"
[2026-01-30 14:34:46] VERSION_ID="7"
[2026-01-30 14:34:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 14:34:46] ANSI_COLOR="0;31"
[2026-01-30 14:34:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 14:34:46] HOME_URL="https://www.centos.org/"
[2026-01-30 14:34:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 14:34:46] 
[2026-01-30 14:34:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 14:34:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 14:34:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 14:34:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 14:34:46] 
[2026-01-30 14:34:46] 2026-01-30 13:34:15,108 | INFO     | **************************************
[2026-01-30 14:34:46] 2026-01-30 13:34:15,611 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-30 14:34:46] 2026-01-30 13:34:15,625 | INFO     | sufficient remaining disk space (320898859008 B)
[2026-01-30 14:34:46] 2026-01-30 13:34:15,625 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 14:34:46] 2026-01-30 13:34:15,625 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 14:34:46] 2026-01-30 13:34:15,625 | INFO     | update_server=False
[2026-01-30 14:34:46] 2026-01-30 13:34:15,625 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 14:34:46] 2026-01-30 13:34:15,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 14:34:46] 2026-01-30 13:34:15,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 14:34:46] 2026-01-30 13:34:15,626 | INFO     | aborting loop
[2026-01-30 14:34:46] 2026-01-30 13:34:15,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 14:34:46] 2026-01-30 13:34:15,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 14:34:46] 2026-01-30 13:34:15,662 | INFO     | all payload control threads have been joined
[2026-01-30 14:34:46] 2026-01-30 13:34:16,064 | INFO     | all data control threads have been joined
[2026-01-30 14:34:46] 2026-01-30 13:34:16,631 | INFO     | [job] retrieve thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:16,632 | INFO     | [job] job monitor thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:16,632 | INFO     | [job] queue monitor thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:16,668 | INFO     | [payload] control thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:16,693 | INFO     | [data] copytool_in thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:16,841 | INFO     | [payload] validate_post thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:17,070 | INFO     | [data] control thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:17,173 | INFO     | all job control threads have been joined
[2026-01-30 14:34:46] 2026-01-30 13:34:17,414 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:17,562 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:17,632 | INFO     | [data] copytool_out thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:17,914 | INFO     | [payload] failed_post thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:18,004 | INFO     | [job] validate thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:18,024 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:18,087 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:18,179 | INFO     | [job] control thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:19,633 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 14:34:46] 2026-01-30 13:34:31,329 | INFO     | [monitor] cgroup control has ended
[2026-01-30 14:34:46] 2026-01-30 13:34:31,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001678624576)>', '<ExcThread(monitor, started 140001329260288)>']
[2026-01-30 14:34:46] 2026-01-30 13:34:36,661 | INFO     | all workflow threads have been joined
[2026-01-30 14:34:46] 2026-01-30 13:34:36,661 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 14:34:46] 2026-01-30 13:34:36,661 | INFO     | traces error code: 0
[2026-01-30 14:34:46] 2026-01-30 13:34:36,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | INFO     | PID=1636240 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 14:34:46] 2026-01-30 13:34:46,105 | INFO     | [monitor] control thread has ended
[2026-01-30 14:34:46] 2026-01-30 13:34:46,156 [wrapper] ==== pilot stdout END ====
[2026-01-30 14:34:46] 2026-01-30 13:34:46,159 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 14:34:46] 2026-01-30 13:34:46,161 [wrapper] pilotpid: 1636240
[2026-01-30 14:34:46] 2026-01-30 13:34:46,164 [wrapper] Pilot exit status: 0
[2026-01-30 14:34:46] 2026-01-30 13:34:46,171 [wrapper] pandaids: 6992221982
[2026-01-30 14:34:46] 2026-01-30 13:34:46,189 [wrapper] cleanup supervisor_pilot 1645647 1636241
[2026-01-30 14:34:46] 2026-01-30 13:34:46,192 [wrapper] Test setup, not cleaning
[2026-01-30 14:34:46] 2026-01-30 13:34:46,194 [wrapper] apfmon messages muted
[2026-01-30 14:34:46] 2026-01-30 13:34:46,197 [wrapper] ==== wrapper stdout END ====
[2026-01-30 14:34:46] 2026-01-30 13:34:46,199 [wrapper] ==== wrapper stderr END ====
[2026-01-30 14:34:46]  *** Error codes and diagnostics ***
[2026-01-30 14:34:46]     "exeErrorCode": 0,
[2026-01-30 14:34:46]     "exeErrorDiag": "",
[2026-01-30 14:34:46]     "pilotErrorCode": 0,
[2026-01-30 14:34:46]     "pilotErrorDiag": "",
[2026-01-30 14:34:46]  *** Listing of results directory ***
[2026-01-30 14:34:46] total 667820
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc    584422 Jan 29 20:28 pilot3.tar.gz
[2026-01-30 14:34:46] -rwx------ 1 boinc boinc     36322 Jan 29 20:37 runpilot2-wrapper.sh
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc      5111 Jan 29 20:38 queuedata.json
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc       100 Jan 30 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 14:34:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 30 13:31 run_atlas
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc       105 Jan 30 13:31 job.xml
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc 495863563 Jan 30 13:31 EVNT.48317869._000245.pool.root.1
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc    597759 Jan 30 13:31 input.tar.gz
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc     15845 Jan 30 13:31 start_atlas.sh
[2026-01-30 14:34:46] drwxrwx--x 2 boinc boinc      4096 Jan 30 13:31 shared
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc         0 Jan 30 13:31 boinc_setup_complete
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc      6443 Jan 30 13:31 init_data.xml
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc         0 Jan 30 13:31 boinc_lockfile
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc      2518 Jan 30 13:31 pandaJob.out
[2026-01-30 14:34:46] -rw------- 1 boinc boinc   1010509 Jan 30 13:31 agis_schedconf.cvmfs.json
[2026-01-30 14:34:46] -rw------- 1 boinc boinc   1511668 Jan 30 13:31 agis_ddmendpoints.agis.ALL.json
[2026-01-30 14:34:46] -rw------- 1 boinc boinc       418 Jan 30 13:31 workernode_map.json
[2026-01-30 14:34:46] drwx------ 5 boinc boinc      4096 Jan 30 13:31 pilot3
[2026-01-30 14:34:46] -rw------- 1 boinc boinc 182433044 Jan 30 14:33 HITS.48317872._013334.pool.root.1
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc       530 Jan 30 14:34 boinc_task_state.xml
[2026-01-30 14:34:46] -rw------- 1 boinc boinc      1035 Jan 30 14:34 memory_monitor_summary.json
[2026-01-30 14:34:46] -rw------- 1 boinc boinc    247897 Jan 30 14:34 log.48317872._013334.job.log.tgz.1
[2026-01-30 14:34:46] -rw------- 1 boinc boinc      6300 Jan 30 14:34 heartbeat.json
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc      8192 Jan 30 14:34 boinc_mmap_file
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc        27 Jan 30 14:34 wrapper_checkpoint.txt
[2026-01-30 14:34:46] -rw------- 1 boinc boinc       747 Jan 30 14:34 pilotlog.txt
[2026-01-30 14:34:46] -rw------- 1 boinc boinc        95 Jan 30 14:34 pilot_heartbeat.json
[2026-01-30 14:34:46] -rw------- 1 boinc boinc    565160 Jan 30 14:34 log.48317872._013334.job.log.1
[2026-01-30 14:34:46] -rw------- 1 boinc boinc       357 Jan 30 14:34 output.list
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc       620 Jan 30 14:34 runtime_log
[2026-01-30 14:34:46] -rw------- 1 boinc boinc    829440 Jan 30 14:34 result.tar.gz
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc      8901 Jan 30 14:34 runtime_log.err
[2026-01-30 14:34:46] -rw------- 1 boinc boinc       658 Jan 30 14:34 YjFLDmm0m58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrMJKDmL623Yn.diag
[2026-01-30 14:34:46] -rw-r--r-- 1 boinc boinc     10810 Jan 30 14:34 stderr.txt
[2026-01-30 14:34:46] HITS file was successfully produced:
[2026-01-30 14:34:46] -rw------- 1 boinc boinc 182433044 Jan 30 14:33 shared/HITS.pool.root.1
[2026-01-30 14:34:46]  *** Contents of shared directory: ***
[2026-01-30 14:34:46] total 663824
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc 495863563 Jan 30 13:31 ATLAS.root_0
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc    597759 Jan 30 13:31 input.tar.gz
[2026-01-30 14:34:46] -rw-r--r-- 2 boinc boinc     15845 Jan 30 13:31 start_atlas.sh
[2026-01-30 14:34:46] -rw------- 1 boinc boinc 182433044 Jan 30 14:33 HITS.pool.root.1
[2026-01-30 14:34:46] -rw------- 1 boinc boinc    829440 Jan 30 14:34 result.tar.gz
14:34:48 (1632137): run_atlas exited; CPU time 14070.457956
14:34:48 (1632137): called boinc_finish(0)

</stderr_txt>
]]>

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